Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC112487.2-201ENST00000637950 304 ntBASIC2.55□□□□□ -2
CCDC38Q502W7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC38Q502W7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CCDC38Q502W7 ZNF204P-201ENST00000416749 2397 ntBASIC2.54□□□□□ -2
CCDC38Q502W7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.54□□□□□ -2
CCDC38Q502W7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CCDC38Q502W7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC38Q502W7 Y_RNA.99-201ENST00000363138 105 ntBASIC2.54□□□□□ -2
CCDC38Q502W7 RNA5SP456-201ENST00000364002 114 ntBASIC2.54□□□□□ -2
CCDC38Q502W7 Y_RNA.259-201ENST00000364619 101 ntBASIC2.54□□□□□ -2
CCDC38Q502W7 RNU6-245P-201ENST00000384020 107 ntBASIC2.54□□□□□ -2
CCDC38Q502W7 MIR196B-201ENST00000384852 84 ntBASIC2.54□□□□□ -2
CCDC38Q502W7 MIR29C-201ENST00000385231 88 ntBASIC2.54□□□□□ -2
CCDC38Q502W7 RNU6-1304P-201ENST00000411374 106 ntBASIC2.54□□□□□ -2
CCDC38Q502W7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.54□□□□□ -2
CCDC38Q502W7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.54□□□□□ -2
CCDC38Q502W7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.54□□□□□ -2
CCDC38Q502W7 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.54□□□□□ -2
CCDC38Q502W7 TOMM22P6-201ENST00000465035 409 ntBASIC2.54□□□□□ -2
CCDC38Q502W7 RPL17P19-201ENST00000489069 552 ntBASIC2.54□□□□□ -2
CCDC38Q502W7 ANP32BP3-201ENST00000559213 706 ntBASIC2.54□□□□□ -2
CCDC38Q502W7 AC009127.3-201ENST00000570531 403 ntBASIC2.54□□□□□ -2
CCDC38Q502W7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.54□□□□□ -2
CCDC38Q502W7 MIR5006-201ENST00000583027 110 ntBASIC2.54□□□□□ -2
CCDC38Q502W7 MIR4298-201ENST00000584380 73 ntBASIC2.54□□□□□ -2
CCDC38Q502W7 AL355802.3-201ENST00000607571 545 ntBASIC2.54□□□□□ -2
CCDC38Q502W7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.54□□□□□ -2
CCDC38Q502W7 AL359697.1-201ENST00000624879 587 ntBASIC2.54□□□□□ -2
CCDC38Q502W7 MTND4LP32-201ENST00000636111 270 ntBASIC2.54□□□□□ -2
CCDC38Q502W7 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC38Q502W7 RNU5E-4P-201ENST00000364931 120 ntBASIC2.53□□□□□ -2
CCDC38Q502W7 SNORD31B-201ENST00000364977 69 ntBASIC2.53□□□□□ -2
CCDC38Q502W7 Y_RNA.332-201ENST00000365271 113 ntBASIC2.53□□□□□ -2
CCDC38Q502W7 RNU6-438P-201ENST00000365561 103 ntBASIC2.53□□□□□ -2
CCDC38Q502W7 SNORD14D-201ENST00000384390 87 ntBASIC2.53□□□□□ -2
CCDC38Q502W7 RNU6-1026P-201ENST00000384465 108 ntBASIC2.53□□□□□ -2
CCDC38Q502W7 MIR549A-201ENST00000385268 96 ntBASIC2.53□□□□□ -2
CCDC38Q502W7 RNY4P36-201ENST00000391116 96 ntBASIC2.53□□□□□ -2
CCDC38Q502W7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.53□□□□□ -2
CCDC38Q502W7 AC009237.7-201ENST00000447357 229 ntBASIC2.53□□□□□ -2
CCDC38Q502W7 MTCO3P8-201ENST00000453691 755 ntBASIC2.53□□□□□ -2
CCDC38Q502W7 RPL30P15-201ENST00000457129 321 ntBASIC2.53□□□□□ -2
CCDC38Q502W7 Y_RNA.632-201ENST00000459189 102 ntBASIC2.53□□□□□ -2
CCDC38Q502W7 RNU7-193P-201ENST00000516723 65 ntBASIC2.53□□□□□ -2
CCDC38Q502W7 Y_RNA.718-201ENST00000517110 102 ntBASIC2.53□□□□□ -2
CCDC38Q502W7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.53□□□□□ -2
CCDC38Q502W7 AC121758.2-201ENST00000553271 193 ntBASIC2.53□□□□□ -2
CCDC38Q502W7 MIR4672-201ENST00000583126 81 ntBASIC2.53□□□□□ -2
CCDC38Q502W7 AL359314.1-201ENST00000616913 261 ntBASIC2.53□□□□□ -2
CCDC38Q502W7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC38Q502W7 AP006437.1-201ENST00000641440 3685 ntBASIC2.53□□□□□ -2.01
CCDC38Q502W7 AC062016.1-201ENST00000355719 319 ntBASIC2.52□□□□□ -2.01
CCDC38Q502W7 SNORD116-29-201ENST00000384516 83 ntBASIC2.52□□□□□ -2.01
CCDC38Q502W7 RNU6-159P-201ENST00000391080 106 ntBASIC2.52□□□□□ -2.01
CCDC38Q502W7 HMGN2P39-201ENST00000398005 273 ntBASIC2.52□□□□□ -2.01
CCDC38Q502W7 MIR190B-201ENST00000401119 79 ntBASIC2.52□□□□□ -2.01
CCDC38Q502W7 MTCO2P27-201ENST00000420740 428 ntBASIC2.52□□□□□ -2.01
CCDC38Q502W7 AC063976.3-201ENST00000426849 329 ntBASIC2.52□□□□□ -2.01
CCDC38Q502W7 SNRPEP8-201ENST00000442866 260 ntBASIC2.52□□□□□ -2.01
CCDC38Q502W7 ELOCP24-201ENST00000456370 334 ntBASIC2.52□□□□□ -2.01
CCDC38Q502W7 RNU6-264P-201ENST00000517134 104 ntBASIC2.52□□□□□ -2.01
CCDC38Q502W7 AC025754.2-201ENST00000606491 432 ntBASIC2.52□□□□□ -2.01
CCDC38Q502W7 AC092608.2-201ENST00000624427 218 ntBASIC2.52□□□□□ -2.01
CCDC38Q502W7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC38Q502W7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CCDC38Q502W7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC38Q502W7 MIR449A-201ENST00000362113 91 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 MIR21-201ENST00000362134 72 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 Y_RNA.67-201ENST00000362870 100 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 RNU4-73P-201ENST00000363164 141 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 RNU5F-3P-201ENST00000363767 117 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 RNU6-280P-201ENST00000364145 104 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 RNU6-890P-201ENST00000384121 107 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 RNU6-301P-201ENST00000384277 107 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 MIR300-201ENST00000401138 83 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC38Q502W7 AC007098.1-201ENST00000420122 367 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 AC123900.1-201ENST00000420390 96 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 MTND3P23-201ENST00000431980 347 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 AC236972.2-201ENST00000434979 310 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC38Q502W7 MTCO3P10-201ENST00000455912 772 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 AC016925.1-201ENST00000458303 298 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 SNORD19B-201ENST00000459623 84 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC38Q502W7 RNA5SP320-201ENST00000516263 124 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 SNORA31.25-201ENST00000517242 134 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC38Q502W7 RAB11AP2-201ENST00000545905 639 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 AC093027.1-201ENST00000546698 429 ntBASIC2.51□□□□□ -2.01
CCDC38Q502W7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC38Q502W7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC38Q502W7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC38Q502W7 Y_RNA.604-201ENST00000410574 102 ntBASIC2.5□□□□□ -2.01
CCDC38Q502W7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC38Q502W7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC38Q502W7 AP000870.1-201ENST00000472927 406 ntBASIC2.5□□□□□ -2.01
CCDC38Q502W7 AC022493.2-201ENST00000506122 481 ntBASIC2.5□□□□□ -2.01
CCDC38Q502W7 AC008549.1-201ENST00000512900 643 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms