Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.91□□□□□ -2.26
ZNF404Q494X3 snoU13.6-201ENST00000458785 104 ntBASIC0.91□□□□□ -2.26
ZNF404Q494X3 COX6CP14-201ENST00000469580 174 ntBASIC0.91□□□□□ -2.26
ZNF404Q494X3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.91□□□□□ -2.26
ZNF404Q494X3 AL163195.1-201ENST00000496941 348 ntBASIC0.91□□□□□ -2.26
ZNF404Q494X3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.91□□□□□ -2.26
ZNF404Q494X3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.91□□□□□ -2.26
ZNF404Q494X3 AC060788.1-201ENST00000521318 469 ntBASIC0.91□□□□□ -2.26
ZNF404Q494X3 MIR4709-201ENST00000577272 72 ntBASIC0.91□□□□□ -2.26
ZNF404Q494X3 AL365434.2-201ENST00000607979 234 ntBASIC0.91□□□□□ -2.26
ZNF404Q494X3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.91□□□□□ -2.26
ZNF404Q494X3 MIR338-201ENST00000636369 67 ntBASIC0.91□□□□□ -2.26
ZNF404Q494X3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.9□□□□□ -2.26
ZNF404Q494X3 SNORA72.2-201ENST00000365028 127 ntBASIC0.9□□□□□ -2.27
ZNF404Q494X3 SNORA4.2-201ENST00000365313 147 ntBASIC0.9□□□□□ -2.27
ZNF404Q494X3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.9□□□□□ -2.27
ZNF404Q494X3 RPL37P10-201ENST00000412884 288 ntBASIC0.9□□□□□ -2.27
ZNF404Q494X3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.9□□□□□ -2.27
ZNF404Q494X3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.9□□□□□ -2.27
ZNF404Q494X3 USP9YP14-201ENST00000430663 563 ntBASIC0.9□□□□□ -2.27
ZNF404Q494X3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.9□□□□□ -2.27
ZNF404Q494X3 MTCO2P3-201ENST00000442543 421 ntBASIC0.9□□□□□ -2.27
ZNF404Q494X3 AC132479.1-201ENST00000449160 144 ntBASIC0.9□□□□□ -2.27
ZNF404Q494X3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.9□□□□□ -2.27
ZNF404Q494X3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.9□□□□□ -2.27
ZNF404Q494X3 RNU7-34P-201ENST00000459394 64 ntBASIC0.9□□□□□ -2.27
ZNF404Q494X3 RPS26P45-201ENST00000471748 340 ntBASIC0.9□□□□□ -2.27
ZNF404Q494X3 AL133373.1-201ENST00000497098 94 ntBASIC0.9□□□□□ -2.27
ZNF404Q494X3 ARL2BPP4-201ENST00000506854 471 ntBASIC0.9□□□□□ -2.27
ZNF404Q494X3 RNU7-40P-201ENST00000516397 64 ntBASIC0.9□□□□□ -2.27
ZNF404Q494X3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.9□□□□□ -2.27
ZNF404Q494X3 AL512310.8-201ENST00000550183 120 ntBASIC0.9□□□□□ -2.27
ZNF404Q494X3 MIR5583-1-201ENST00000580941 59 ntBASIC0.9□□□□□ -2.27
ZNF404Q494X3 AC025449.1-201ENST00000603896 529 ntBASIC0.9□□□□□ -2.27
ZNF404Q494X3 AC008536.2-201ENST00000607284 349 ntBASIC0.9□□□□□ -2.27
ZNF404Q494X3 AC087683.2-201ENST00000611384 326 ntBASIC0.9□□□□□ -2.27
ZNF404Q494X3 AC005562.2-201ENST00000618264 111 ntBASIC0.9□□□□□ -2.27
ZNF404Q494X3 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.9□□□□□ -2.27
ZNF404Q494X3 AC009033.1-201ENST00000624279 431 ntBASIC0.9□□□□□ -2.27
ZNF404Q494X3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.9□□□□□ -2.27
ZNF404Q494X3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.9□□□□□ -2.27
ZNF404Q494X3 AL390237.1-201ENST00000404226 1415 ntBASIC0.89□□□□□ -2.27
ZNF404Q494X3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.89□□□□□ -2.27
ZNF404Q494X3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.89□□□□□ -2.27
ZNF404Q494X3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.89□□□□□ -2.27
ZNF404Q494X3 SNORD73A-201ENST00000386062 65 ntBASIC0.89□□□□□ -2.27
ZNF404Q494X3 RNU6-903P-201ENST00000391270 109 ntBASIC0.89□□□□□ -2.27
ZNF404Q494X3 SNORA26.8-201ENST00000391306 124 ntBASIC0.89□□□□□ -2.27
ZNF404Q494X3 MTND2P18-201ENST00000419962 1030 ntBASIC0.89□□□□□ -2.27
ZNF404Q494X3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.89□□□□□ -2.27
ZNF404Q494X3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.89□□□□□ -2.27
ZNF404Q494X3 MTND4P32-201ENST00000437189 1237 ntBASIC0.89□□□□□ -2.27
ZNF404Q494X3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.89□□□□□ -2.27
ZNF404Q494X3 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.89□□□□□ -2.27
ZNF404Q494X3 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.89□□□□□ -2.27
ZNF404Q494X3 AL356010.1-201ENST00000456364 102 ntBASIC0.89□□□□□ -2.27
ZNF404Q494X3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.89□□□□□ -2.27
ZNF404Q494X3 RPL39P5-202ENST00000512505 151 ntBASIC0.89□□□□□ -2.27
ZNF404Q494X3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.89□□□□□ -2.27
ZNF404Q494X3 RN7SKP287-201ENST00000516546 266 ntBASIC0.89□□□□□ -2.27
ZNF404Q494X3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.89□□□□□ -2.27
ZNF404Q494X3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.89□□□□□ -2.27
ZNF404Q494X3 AC016256.1-201ENST00000547971 354 ntBASIC0.89□□□□□ -2.27
ZNF404Q494X3 AC093424.1-201ENST00000604999 338 ntBASIC0.89□□□□□ -2.27
ZNF404Q494X3 SNORD114-21-201ENST00000606412 72 ntBASIC0.89□□□□□ -2.27
ZNF404Q494X3 AC040896.1-201ENST00000613819 479 ntBASIC0.89□□□□□ -2.27
ZNF404Q494X3 MIR8065-201ENST00000620577 100 ntBASIC0.89□□□□□ -2.27
ZNF404Q494X3 AL359697.1-201ENST00000624879 587 ntBASIC0.89□□□□□ -2.27
ZNF404Q494X3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
ZNF404Q494X3 snoU2-30.2-201ENST00000362805 70 ntBASIC0.88□□□□□ -2.27
ZNF404Q494X3 RNU6-534P-201ENST00000364877 106 ntBASIC0.88□□□□□ -2.27
ZNF404Q494X3 RNU6-517P-201ENST00000384362 110 ntBASIC0.88□□□□□ -2.27
ZNF404Q494X3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
ZNF404Q494X3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
ZNF404Q494X3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.88□□□□□ -2.27
ZNF404Q494X3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.88□□□□□ -2.27
ZNF404Q494X3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.88□□□□□ -2.27
ZNF404Q494X3 RNU7-138P-201ENST00000459479 64 ntBASIC0.88□□□□□ -2.27
ZNF404Q494X3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.88□□□□□ -2.27
ZNF404Q494X3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.88□□□□□ -2.27
ZNF404Q494X3 Y_RNA.676-201ENST00000516393 96 ntBASIC0.88□□□□□ -2.27
ZNF404Q494X3 RNU6-612P-201ENST00000516909 102 ntBASIC0.88□□□□□ -2.27
ZNF404Q494X3 MTND1P24-201ENST00000552175 861 ntBASIC0.88□□□□□ -2.27
ZNF404Q494X3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.88□□□□□ -2.27
ZNF404Q494X3 HIF1AP1-201ENST00000553642 175 ntBASIC0.88□□□□□ -2.27
ZNF404Q494X3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.88□□□□□ -2.27
ZNF404Q494X3 AC026470.2-201ENST00000561492 181 ntBASIC0.88□□□□□ -2.27
ZNF404Q494X3 HSPE1P19-201ENST00000603327 295 ntBASIC0.88□□□□□ -2.27
ZNF404Q494X3 MZT1P2-201ENST00000604387 248 ntBASIC0.88□□□□□ -2.27
ZNF404Q494X3 MIR8070-201ENST00000616510 88 ntBASIC0.88□□□□□ -2.27
ZNF404Q494X3 AC099654.5-201ENST00000636479 350 ntBASIC0.88□□□□□ -2.27
ZNF404Q494X3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.88□□□□□ -2.27
ZNF404Q494X3 RNU6-1120P-201ENST00000362988 108 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 SNORA33-201ENST00000363664 130 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 RNA5SP259-201ENST00000365541 109 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 RNU6-1235P-201ENST00000384559 107 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 MIR515-2-201ENST00000384883 83 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 MIR515-1-201ENST00000384884 83 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.87□□□□□ -2.27
ZNF404Q494X3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms