Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 SNORD56.1-201ENST00000362913 68 ntBASIC3.09□□□□□ -1.91
SF3B3Q15393 RNA5SP456-201ENST00000364002 114 ntBASIC3.09□□□□□ -1.91
SF3B3Q15393 RNU6-17P-201ENST00000384245 107 ntBASIC3.09□□□□□ -1.91
SF3B3Q15393 RNY3P4-201ENST00000384428 101 ntBASIC3.09□□□□□ -1.91
SF3B3Q15393 RNU6-18P-201ENST00000384527 107 ntBASIC3.09□□□□□ -1.91
SF3B3Q15393 RNU6-121P-201ENST00000410525 99 ntBASIC3.09□□□□□ -1.91
SF3B3Q15393 RNU6-1245P-201ENST00000411130 106 ntBASIC3.09□□□□□ -1.91
SF3B3Q15393 EIF1AXP1-201ENST00000419267 435 ntBASIC3.09□□□□□ -1.91
SF3B3Q15393 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.09□□□□□ -1.91
SF3B3Q15393 AC009296.1-201ENST00000443146 155 ntBASIC3.09□□□□□ -1.91
SF3B3Q15393 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.09□□□□□ -1.91
SF3B3Q15393 RNU6-1132P-201ENST00000459214 107 ntBASIC3.09□□□□□ -1.91
SF3B3Q15393 RNU7-87P-201ENST00000459343 62 ntBASIC3.09□□□□□ -1.91
SF3B3Q15393 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.09□□□□□ -1.91
SF3B3Q15393 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.09□□□□□ -1.91
SF3B3Q15393 AP003733.2-201ENST00000529409 171 ntBASIC3.09□□□□□ -1.91
SF3B3Q15393 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.09□□□□□ -1.91
SF3B3Q15393 AC021739.1-201ENST00000559631 174 ntBASIC3.09□□□□□ -1.91
SF3B3Q15393 AC090617.3-201ENST00000573670 475 ntBASIC3.09□□□□□ -1.91
SF3B3Q15393 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.09□□□□□ -1.91
SF3B3Q15393 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.09□□□□□ -1.91
SF3B3Q15393 AC010615.1-201ENST00000594254 1764 ntBASIC3.09□□□□□ -1.91
SF3B3Q15393 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SF3B3Q15393 AC110491.1-201ENST00000562191 2010 ntBASIC3.09□□□□□ -1.92
SF3B3Q15393 AC016717.2-201ENST00000609089 5141 ntBASIC3.08□□□□□ -1.92
SF3B3Q15393 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SF3B3Q15393 SNORD115-32-201ENST00000364079 82 ntBASIC3.08□□□□□ -1.92
SF3B3Q15393 RNU6-1280P-201ENST00000365211 107 ntBASIC3.08□□□□□ -1.92
SF3B3Q15393 Y_RNA.350-201ENST00000365409 98 ntBASIC3.08□□□□□ -1.92
SF3B3Q15393 Y_RNA.489-201ENST00000384410 101 ntBASIC3.08□□□□□ -1.92
SF3B3Q15393 RNA5SP354-201ENST00000391247 136 ntBASIC3.08□□□□□ -1.92
SF3B3Q15393 RNU2-25P-201ENST00000411041 191 ntBASIC3.08□□□□□ -1.92
SF3B3Q15393 AC010095.1-201ENST00000443543 144 ntBASIC3.08□□□□□ -1.92
SF3B3Q15393 AF186996.7-201ENST00000492781 209 ntBASIC3.08□□□□□ -1.92
SF3B3Q15393 RNU6-581P-201ENST00000516214 105 ntBASIC3.08□□□□□ -1.92
SF3B3Q15393 Y_RNA.680-201ENST00000516441 93 ntBASIC3.08□□□□□ -1.92
SF3B3Q15393 RNU6-388P-201ENST00000517012 105 ntBASIC3.08□□□□□ -1.92
SF3B3Q15393 RNU6-389P-201ENST00000517048 105 ntBASIC3.08□□□□□ -1.92
SF3B3Q15393 RN7SKP40-201ENST00000517211 242 ntBASIC3.08□□□□□ -1.92
SF3B3Q15393 SNORA31.23-201ENST00000517219 133 ntBASIC3.08□□□□□ -1.92
SF3B3Q15393 AC005357.1-201ENST00000588399 301 ntBASIC3.08□□□□□ -1.92
SF3B3Q15393 SNORA43.4-201ENST00000629559 138 ntBASIC3.08□□□□□ -1.92
SF3B3Q15393 U6.92-201ENST00000636464 89 ntBASIC3.08□□□□□ -1.92
SF3B3Q15393 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
SF3B3Q15393 AC007336.1-201ENST00000576365 3828 ntBASIC3.07□□□□□ -1.92
SF3B3Q15393 Y_RNA.562-201ENST00000384695 113 ntBASIC3.07□□□□□ -1.92
SF3B3Q15393 MT-TR-201ENST00000387439 65 ntBASIC3.07□□□□□ -1.92
SF3B3Q15393 RN7SKP192-201ENST00000411291 327 ntBASIC3.07□□□□□ -1.92
SF3B3Q15393 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.07□□□□□ -1.92
SF3B3Q15393 SDAD1P3-201ENST00000427380 333 ntBASIC3.07□□□□□ -1.92
SF3B3Q15393 AL353705.4-201ENST00000449661 238 ntBASIC3.07□□□□□ -1.92
SF3B3Q15393 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.07□□□□□ -1.92
SF3B3Q15393 MED28P2-201ENST00000475771 317 ntBASIC3.07□□□□□ -1.92
SF3B3Q15393 RPS27P26-201ENST00000494583 239 ntBASIC3.07□□□□□ -1.92
SF3B3Q15393 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.07□□□□□ -1.92
SF3B3Q15393 AC016256.1-201ENST00000547971 354 ntBASIC3.07□□□□□ -1.92
SF3B3Q15393 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.07□□□□□ -1.92
SF3B3Q15393 AC009163.5-201ENST00000575421 637 ntBASIC3.07□□□□□ -1.92
SF3B3Q15393 RMST_6.1-201ENST00000611980 203 ntBASIC3.07□□□□□ -1.92
SF3B3Q15393 AC073308.1-201ENST00000623696 305 ntBASIC3.07□□□□□ -1.92
SF3B3Q15393 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.07□□□□□ -1.92
SF3B3Q15393 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SF3B3Q15393 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SF3B3Q15393 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SF3B3Q15393 Y_RNA.14-201ENST00000362415 103 ntBASIC3.06□□□□□ -1.92
SF3B3Q15393 RNU6-858P-201ENST00000362436 107 ntBASIC3.06□□□□□ -1.92
SF3B3Q15393 RNU5B-2P-201ENST00000363036 113 ntBASIC3.06□□□□□ -1.92
SF3B3Q15393 U8.2-201ENST00000363156 134 ntBASIC3.06□□□□□ -1.92
SF3B3Q15393 SNORA29-201ENST00000384183 140 ntBASIC3.06□□□□□ -1.92
SF3B3Q15393 RNU6-843P-201ENST00000384454 104 ntBASIC3.06□□□□□ -1.92
SF3B3Q15393 RNU6-1026P-201ENST00000384465 108 ntBASIC3.06□□□□□ -1.92
SF3B3Q15393 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.06□□□□□ -1.92
SF3B3Q15393 RNU2-38P-201ENST00000410856 79 ntBASIC3.06□□□□□ -1.92
SF3B3Q15393 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.06□□□□□ -1.92
SF3B3Q15393 RPL21P38-201ENST00000418090 167 ntBASIC3.06□□□□□ -1.92
SF3B3Q15393 AC139712.2-201ENST00000424302 339 ntBASIC3.06□□□□□ -1.92
SF3B3Q15393 AL365496.1-201ENST00000426885 215 ntBASIC3.06□□□□□ -1.92
SF3B3Q15393 AP001025.1-201ENST00000486139 332 ntBASIC3.06□□□□□ -1.92
SF3B3Q15393 AIG1P1-201ENST00000503376 148 ntBASIC3.06□□□□□ -1.92
SF3B3Q15393 MTND1P19-201ENST00000511780 315 ntBASIC3.06□□□□□ -1.92
SF3B3Q15393 RPPH1-2P-201ENST00000516688 293 ntBASIC3.06□□□□□ -1.92
SF3B3Q15393 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.06□□□□□ -1.92
SF3B3Q15393 AC006199.1-201ENST00000548728 219 ntBASIC3.06□□□□□ -1.92
SF3B3Q15393 U6.104-201ENST00000637979 90 ntBASIC3.06□□□□□ -1.92
SF3B3Q15393 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.06□□□□□ -1.92
SF3B3Q15393 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.06□□□□□ -1.92
SF3B3Q15393 RNU6-222P-201ENST00000362438 107 ntBASIC3.05□□□□□ -1.92
SF3B3Q15393 RNU6-1301P-201ENST00000362724 104 ntBASIC3.05□□□□□ -1.92
SF3B3Q15393 RNU1-105P-201ENST00000363470 161 ntBASIC3.05□□□□□ -1.92
SF3B3Q15393 Y_RNA.257-201ENST00000364596 102 ntBASIC3.05□□□□□ -1.92
SF3B3Q15393 RNA5SP213-201ENST00000391031 106 ntBASIC3.05□□□□□ -1.92
SF3B3Q15393 AC009414.1-201ENST00000427200 443 ntBASIC3.05□□□□□ -1.92
SF3B3Q15393 AC087477.1-201ENST00000465747 340 ntBASIC3.05□□□□□ -1.92
SF3B3Q15393 AC098869.1-201ENST00000481627 292 ntBASIC3.05□□□□□ -1.92
SF3B3Q15393 RPL23AP70-201ENST00000483361 460 ntBASIC3.05□□□□□ -1.92
SF3B3Q15393 AC234781.5-201ENST00000508429 271 ntBASIC3.05□□□□□ -1.92
SF3B3Q15393 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.05□□□□□ -1.92
SF3B3Q15393 RNA5SP76-201ENST00000516277 87 ntBASIC3.05□□□□□ -1.92
SF3B3Q15393 RNU6-570P-201ENST00000517051 105 ntBASIC3.05□□□□□ -1.92
SF3B3Q15393 CKS1BP7-201ENST00000522230 235 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms