Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC110588.1-201ENST00000559699 137 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 AC026470.2-201ENST00000561492 181 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 SUB1P4-201ENST00000566062 339 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 MIR3976-201ENST00000606807 139 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.48□□□□□ -2.17
RAB40BQ12829 MIR1321-201ENST00000637766 79 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 MTND5P9-201ENST00000503854 1755 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RAB40BQ12829 RNU6-1090P-201ENST00000364065 94 ntBASIC1.47□□□□□ -2.17
RAB40BQ12829 Y_RNA.256-201ENST00000364594 104 ntBASIC1.47□□□□□ -2.17
RAB40BQ12829 RNU6-877P-201ENST00000383868 107 ntBASIC1.47□□□□□ -2.17
RAB40BQ12829 RNU6-784P-201ENST00000384330 106 ntBASIC1.47□□□□□ -2.17
RAB40BQ12829 RNU6-790P-201ENST00000384479 105 ntBASIC1.47□□□□□ -2.17
RAB40BQ12829 MIR504-201ENST00000385065 83 ntBASIC1.47□□□□□ -2.17
RAB40BQ12829 MIR300-201ENST00000401138 83 ntBASIC1.47□□□□□ -2.17
RAB40BQ12829 VN1R36P-201ENST00000414936 291 ntBASIC1.47□□□□□ -2.17
RAB40BQ12829 RPL21P111-201ENST00000418453 477 ntBASIC1.47□□□□□ -2.17
RAB40BQ12829 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.47□□□□□ -2.17
RAB40BQ12829 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.47□□□□□ -2.17
RAB40BQ12829 AC004386.2-201ENST00000441858 148 ntBASIC1.47□□□□□ -2.17
RAB40BQ12829 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.47□□□□□ -2.17
RAB40BQ12829 RNU7-187P-201ENST00000458985 68 ntBASIC1.47□□□□□ -2.17
RAB40BQ12829 TRBVA-201ENST00000498804 316 ntBASIC1.47□□□□□ -2.17
RAB40BQ12829 SNORA44.1-201ENST00000517031 108 ntBASIC1.47□□□□□ -2.17
RAB40BQ12829 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.47□□□□□ -2.17
RAB40BQ12829 DEFB122-202ENST00000569013 197 ntBASIC1.47□□□□□ -2.17
RAB40BQ12829 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.47□□□□□ -2.17
RAB40BQ12829 MIR5006-201ENST00000583027 110 ntBASIC1.47□□□□□ -2.17
RAB40BQ12829 AL133215.3-201ENST00000609801 448 ntBASIC1.47□□□□□ -2.17
RAB40BQ12829 AC009318.2-201ENST00000610917 651 ntBASIC1.47□□□□□ -2.17
RAB40BQ12829 uc_338.5-201ENST00000611839 155 ntBASIC1.47□□□□□ -2.17
RAB40BQ12829 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
RAB40BQ12829 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.47□□□□□ -2.17
RAB40BQ12829 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.46□□□□□ -2.17
RAB40BQ12829 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
RAB40BQ12829 RNU6-439P-201ENST00000384188 106 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 MIR549A-201ENST00000385268 96 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.46□□□□□ -2.18
RAB40BQ12829 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.46□□□□□ -2.18
RAB40BQ12829 AL357134.1-201ENST00000445848 426 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 MTCO2P7-201ENST00000446518 666 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 ATP5J2P3-201ENST00000451550 258 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 OR2AQ1P-201ENST00000451972 200 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 HMGN2P23-201ENST00000456759 269 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 AC087477.1-201ENST00000465747 340 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 AC008834.1-201ENST00000511612 175 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.46□□□□□ -2.18
RAB40BQ12829 MTND1P35-201ENST00000526739 508 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 AC109635.3-201ENST00000529536 185 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 AC016957.1-201ENST00000534895 309 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 CBX3P4-201ENST00000538909 354 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.46□□□□□ -2.18
RAB40BQ12829 HSBP1P1-201ENST00000555205 166 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.46□□□□□ -2.18
RAB40BQ12829 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.46□□□□□ -2.18
RAB40BQ12829 SNORA59B-202ENST00000578183 701 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 MIR4753-201ENST00000585119 83 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 AC104984.5-201ENST00000586878 94 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 AP000907.4-201ENST00000604143 237 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 AC012557.2-201ENST00000605919 418 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.46□□□□□ -2.18
RAB40BQ12829 TCL6_2.1-201ENST00000615162 119 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 AL359697.1-201ENST00000624879 587 ntBASIC1.46□□□□□ -2.18
RAB40BQ12829 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.46□□□□□ -2.18
RAB40BQ12829 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.46□□□□□ -2.18
RAB40BQ12829 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
RAB40BQ12829 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
RAB40BQ12829 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
RAB40BQ12829 RNU6-112P-201ENST00000363599 104 ntBASIC1.45□□□□□ -2.18
RAB40BQ12829 RNU6-418P-201ENST00000384035 107 ntBASIC1.45□□□□□ -2.18
RAB40BQ12829 Y_RNA.530-201ENST00000384587 101 ntBASIC1.45□□□□□ -2.18
RAB40BQ12829 MIR30A-201ENST00000385092 71 ntBASIC1.45□□□□□ -2.18
RAB40BQ12829 U8.13-201ENST00000390842 128 ntBASIC1.45□□□□□ -2.18
RAB40BQ12829 MIR1283-1-201ENST00000408494 87 ntBASIC1.45□□□□□ -2.18
RAB40BQ12829 RN7SKP101-201ENST00000411376 320 ntBASIC1.45□□□□□ -2.18
RAB40BQ12829 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.45□□□□□ -2.18
RAB40BQ12829 HMGB1P18-201ENST00000438801 619 ntBASIC1.45□□□□□ -2.18
RAB40BQ12829 RNU6-295P-201ENST00000516901 104 ntBASIC1.45□□□□□ -2.18
RAB40BQ12829 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.45□□□□□ -2.18
RAB40BQ12829 MIR3198-2-201ENST00000577868 80 ntBASIC1.45□□□□□ -2.18
RAB40BQ12829 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.45□□□□□ -2.18
RAB40BQ12829 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.45□□□□□ -2.18
RAB40BQ12829 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
RAB40BQ12829 AP000648.3-201ENST00000623539 4507 ntBASIC1.44□□□□□ -2.18
RAB40BQ12829 RNU6-661P-201ENST00000362409 107 ntBASIC1.44□□□□□ -2.18
RAB40BQ12829 RNU6-623P-201ENST00000363143 105 ntBASIC1.44□□□□□ -2.18
RAB40BQ12829 Y_RNA.151-201ENST00000363566 112 ntBASIC1.44□□□□□ -2.18
RAB40BQ12829 MIR181A1-201ENST00000385026 110 ntBASIC1.44□□□□□ -2.18
RAB40BQ12829 RNU6-332P-201ENST00000391193 108 ntBASIC1.44□□□□□ -2.18
RAB40BQ12829 Z82205.1-201ENST00000428456 297 ntBASIC1.44□□□□□ -2.18
RAB40BQ12829 MTCO3P18-201ENST00000440206 761 ntBASIC1.44□□□□□ -2.18
RAB40BQ12829 AL353572.1-201ENST00000442490 417 ntBASIC1.44□□□□□ -2.18
RAB40BQ12829 AC009237.7-201ENST00000447357 229 ntBASIC1.44□□□□□ -2.18
RAB40BQ12829 MTCO3P8-201ENST00000453691 755 ntBASIC1.44□□□□□ -2.18
RAB40BQ12829 PCMTD1P1-201ENST00000455560 355 ntBASIC1.44□□□□□ -2.18
RAB40BQ12829 RNU6-1041P-201ENST00000516254 102 ntBASIC1.44□□□□□ -2.18
RAB40BQ12829 RNU6-856P-201ENST00000516959 98 ntBASIC1.44□□□□□ -2.18
RAB40BQ12829 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.44□□□□□ -2.18
RAB40BQ12829 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.44□□□□□ -2.18
RAB40BQ12829 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms