Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 HMGN2P18-201ENST00000450680 270 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.44□□□□□ -2.18
SMARCB1Q12824 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.44□□□□□ -2.18
SMARCB1Q12824 FO393415.2-201ENST00000480085 343 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 FAM206BP-201ENST00000510179 541 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 AC025465.4-201ENST00000513422 638 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 RNU6-1281P-201ENST00000516223 105 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 AC087854.1-201ENST00000519706 414 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 SCOCP1-201ENST00000554676 349 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 AL157687.1-201ENST00000554853 619 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 AL160236.1-201ENST00000556317 195 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 AC109446.1-201ENST00000566172 220 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 MIR3169-201ENST00000578032 83 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SMARCB1Q12824 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
SMARCB1Q12824 RNU6-26P-201ENST00000383985 107 ntBASIC1.43□□□□□ -2.18
SMARCB1Q12824 MTCO3P46-201ENST00000425787 232 ntBASIC1.43□□□□□ -2.18
SMARCB1Q12824 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.43□□□□□ -2.18
SMARCB1Q12824 ERLEC1P1-201ENST00000433806 578 ntBASIC1.43□□□□□ -2.18
SMARCB1Q12824 AL359672.1-201ENST00000442302 409 ntBASIC1.43□□□□□ -2.18
SMARCB1Q12824 RNU7-66P-201ENST00000459469 62 ntBASIC1.43□□□□□ -2.18
SMARCB1Q12824 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.43□□□□□ -2.18
SMARCB1Q12824 AC091885.1-201ENST00000506658 268 ntBASIC1.43□□□□□ -2.18
SMARCB1Q12824 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.43□□□□□ -2.18
SMARCB1Q12824 RNVU1-2-201ENST00000516326 135 ntBASIC1.43□□□□□ -2.18
SMARCB1Q12824 RNU6-1098P-201ENST00000516772 96 ntBASIC1.43□□□□□ -2.18
SMARCB1Q12824 RNA5SP490-201ENST00000517141 136 ntBASIC1.43□□□□□ -2.18
SMARCB1Q12824 MIR4781-201ENST00000585250 76 ntBASIC1.43□□□□□ -2.18
SMARCB1Q12824 AP000654.2-201ENST00000605633 586 ntBASIC1.43□□□□□ -2.18
SMARCB1Q12824 AC009994.1-201ENST00000606889 253 ntBASIC1.43□□□□□ -2.18
SMARCB1Q12824 AL157834.3-201ENST00000615543 103 ntBASIC1.43□□□□□ -2.18
SMARCB1Q12824 AC073534.2-201ENST00000620377 381 ntBASIC1.43□□□□□ -2.18
SMARCB1Q12824 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.43□□□□□ -2.18
SMARCB1Q12824 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.43□□□□□ -2.18
SMARCB1Q12824 AC099654.12-201ENST00000639868 649 ntBASIC1.43□□□□□ -2.18
SMARCB1Q12824 AC121333.1-201ENST00000567488 2709 ntBASIC1.43□□□□□ -2.18
SMARCB1Q12824 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SMARCB1Q12824 AC009541.1-201ENST00000438279 2662 ntBASIC1.43□□□□□ -2.18
SMARCB1Q12824 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
SMARCB1Q12824 RNA5SP493-201ENST00000364115 91 ntBASIC1.42□□□□□ -2.18
SMARCB1Q12824 Y_RNA.256-201ENST00000364594 104 ntBASIC1.42□□□□□ -2.18
SMARCB1Q12824 RNU6-203P-201ENST00000384038 104 ntBASIC1.42□□□□□ -2.18
SMARCB1Q12824 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.42□□□□□ -2.18
SMARCB1Q12824 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
SMARCB1Q12824 RNU6-325P-201ENST00000411132 105 ntBASIC1.42□□□□□ -2.18
SMARCB1Q12824 AC009310.1-201ENST00000414414 451 ntBASIC1.42□□□□□ -2.18
SMARCB1Q12824 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SMARCB1Q12824 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.42□□□□□ -2.18
SMARCB1Q12824 USP9YP28-201ENST00000435142 589 ntBASIC1.42□□□□□ -2.18
SMARCB1Q12824 RNU6-1037P-201ENST00000459571 107 ntBASIC1.42□□□□□ -2.18
SMARCB1Q12824 TOMM22P6-201ENST00000465035 409 ntBASIC1.42□□□□□ -2.18
SMARCB1Q12824 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.42□□□□□ -2.18
SMARCB1Q12824 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.42□□□□□ -2.18
SMARCB1Q12824 RNU6-1332P-201ENST00000516666 104 ntBASIC1.42□□□□□ -2.18
SMARCB1Q12824 MRPS36P4-201ENST00000534436 298 ntBASIC1.42□□□□□ -2.18
SMARCB1Q12824 AC245505.1-201ENST00000556398 224 ntBASIC1.42□□□□□ -2.18
SMARCB1Q12824 CYP4A27P-201ENST00000567218 190 ntBASIC1.42□□□□□ -2.18
SMARCB1Q12824 MIR3923-201ENST00000579521 83 ntBASIC1.42□□□□□ -2.18
SMARCB1Q12824 MIR3660-201ENST00000584845 100 ntBASIC1.42□□□□□ -2.18
SMARCB1Q12824 PRR13P7-201ENST00000605538 430 ntBASIC1.42□□□□□ -2.18
SMARCB1Q12824 RMST_3.1-201ENST00000611651 109 ntBASIC1.42□□□□□ -2.18
SMARCB1Q12824 AC005520.5-201ENST00000613926 164 ntBASIC1.42□□□□□ -2.18
SMARCB1Q12824 FER-210ENST00000628534 558 ntTSL 5 BASIC1.42□□□□□ -2.18
SMARCB1Q12824 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SMARCB1Q12824 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
SMARCB1Q12824 RNU6-227P-201ENST00000362865 103 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 U3.9-201ENST00000363823 204 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 RNU4-40P-201ENST00000364351 143 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 SNORA29-201ENST00000384183 140 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 Y_RNA.554-201ENST00000384672 102 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 MIR549A-201ENST00000385268 96 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
SMARCB1Q12824 EIF4E2P1-201ENST00000393781 255 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 MTCO3P41-201ENST00000414801 328 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 UBE2V1P4-201ENST00000425374 344 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 SEPT14P3-201ENST00000439401 183 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 AL732372.2-207ENST00000445840 183 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.41□□□□□ -2.18
SMARCB1Q12824 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.41□□□□□ -2.18
SMARCB1Q12824 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.41□□□□□ -2.18
SMARCB1Q12824 SEPT14P2-201ENST00000453405 183 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.41□□□□□ -2.18
SMARCB1Q12824 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.41□□□□□ -2.18
SMARCB1Q12824 RNU1-123P-201ENST00000458950 160 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 HMGN2P26-201ENST00000463169 339 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 RPL9P9-202ENST00000466501 579 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 MTCYBP18-201ENST00000501056 747 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 AC105313.1-201ENST00000509121 353 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 SEPT14P4-201ENST00000513445 186 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 RNU6-506P-201ENST00000516553 94 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.41□□□□□ -2.18
SMARCB1Q12824 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.41□□□□□ -2.18
SMARCB1Q12824 FO082796.1-201ENST00000523795 183 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.41□□□□□ -2.18
SMARCB1Q12824 AC021231.3-201ENST00000558497 370 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 CPDP1-201ENST00000579660 283 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 AL162413.1-201ENST00000603198 110 ntBASIC1.41□□□□□ -2.18
SMARCB1Q12824 LINC02555-201ENST00000563933 1951 ntBASIC1.4□□□□□ -2.19
SMARCB1Q12824 RNU5B-2P-201ENST00000363036 113 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms