Protein–RNA interactions for Protein: Q09028

RBBP4, Histone-binding protein RBBP4, humanhuman

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4Q09028 AC090517.1-201ENST00000569307 266 ntBASIC1.84□□□□□ -2.11
RBBP4Q09028 AC026271.5-201ENST00000577873 130 ntBASIC1.84□□□□□ -2.11
RBBP4Q09028 AL158827.2-201ENST00000602494 330 ntBASIC1.84□□□□□ -2.11
RBBP4Q09028 AC016727.2-201ENST00000603988 621 ntBASIC1.84□□□□□ -2.11
RBBP4Q09028 AP000654.2-201ENST00000605633 586 ntBASIC1.84□□□□□ -2.11
RBBP4Q09028 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.84□□□□□ -2.11
RBBP4Q09028 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.84□□□□□ -2.11
RBBP4Q09028 uc_338.20-201ENST00000621563 178 ntBASIC1.84□□□□□ -2.11
RBBP4Q09028 AC091932.3-201ENST00000624223 323 ntBASIC1.84□□□□□ -2.11
RBBP4Q09028 SCARNA4-201ENST00000629045 128 ntBASIC1.84□□□□□ -2.11
RBBP4Q09028 AL691447.3-201ENST00000635020 330 ntBASIC1.84□□□□□ -2.11
RBBP4Q09028 ZNF355P-201ENST00000427301 3216 ntBASIC1.83□□□□□ -2.12
RBBP4Q09028 U8.10-201ENST00000384260 133 ntBASIC1.83□□□□□ -2.12
RBBP4Q09028 Y_RNA.533-201ENST00000384596 114 ntBASIC1.83□□□□□ -2.12
RBBP4Q09028 SRIP3-201ENST00000413200 219 ntBASIC1.83□□□□□ -2.12
RBBP4Q09028 AC074085.1-201ENST00000413598 418 ntBASIC1.83□□□□□ -2.12
RBBP4Q09028 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.83□□□□□ -2.12
RBBP4Q09028 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.83□□□□□ -2.12
RBBP4Q09028 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.83□□□□□ -2.12
RBBP4Q09028 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.83□□□□□ -2.12
RBBP4Q09028 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.83□□□□□ -2.12
RBBP4Q09028 RN7SL274P-201ENST00000492268 272 ntBASIC1.83□□□□□ -2.12
RBBP4Q09028 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.83□□□□□ -2.12
RBBP4Q09028 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.83□□□□□ -2.12
RBBP4Q09028 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.83□□□□□ -2.12
RBBP4Q09028 AC011494.1-201ENST00000596454 237 ntBASIC1.83□□□□□ -2.12
RBBP4Q09028 RBM11P1-201ENST00000604951 799 ntBASIC1.83□□□□□ -2.12
RBBP4Q09028 AC018462.2-201ENST00000605375 395 ntBASIC1.83□□□□□ -2.12
RBBP4Q09028 AL627230.6-201ENST00000611129 280 ntBASIC1.83□□□□□ -2.12
RBBP4Q09028 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.83□□□□□ -2.12
RBBP4Q09028 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RBBP4Q09028 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RBBP4Q09028 AC092881.1-201ENST00000638218 2733 ntBASIC1.82□□□□□ -2.12
RBBP4Q09028 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
RBBP4Q09028 RNU1-76P-201ENST00000362903 159 ntBASIC1.82□□□□□ -2.12
RBBP4Q09028 Y_RNA.88-201ENST00000363029 99 ntBASIC1.82□□□□□ -2.12
RBBP4Q09028 RNU6-1164P-201ENST00000364428 107 ntBASIC1.82□□□□□ -2.12
RBBP4Q09028 Y_RNA.303-201ENST00000364998 94 ntBASIC1.82□□□□□ -2.12
RBBP4Q09028 RNA5SP489-201ENST00000410986 109 ntBASIC1.82□□□□□ -2.12
RBBP4Q09028 AC243428.1-201ENST00000421099 264 ntBASIC1.82□□□□□ -2.12
RBBP4Q09028 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.82□□□□□ -2.12
RBBP4Q09028 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.82□□□□□ -2.12
RBBP4Q09028 Y_RNA.691-201ENST00000516611 103 ntBASIC1.82□□□□□ -2.12
RBBP4Q09028 RNU6-1016P-201ENST00000516689 94 ntBASIC1.82□□□□□ -2.12
RBBP4Q09028 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.82□□□□□ -2.12
RBBP4Q09028 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.82□□□□□ -2.12
RBBP4Q09028 ANP32BP3-201ENST00000559213 706 ntBASIC1.82□□□□□ -2.12
RBBP4Q09028 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.82□□□□□ -2.12
RBBP4Q09028 MIR4648-201ENST00000580107 72 ntBASIC1.82□□□□□ -2.12
RBBP4Q09028 MIR4801-201ENST00000582704 82 ntBASIC1.82□□□□□ -2.12
RBBP4Q09028 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.82□□□□□ -2.12
RBBP4Q09028 AL096840.1-201ENST00000603287 93 ntBASIC1.82□□□□□ -2.12
RBBP4Q09028 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.82□□□□□ -2.12
RBBP4Q09028 Y_RNA.783-201ENST00000613546 102 ntBASIC1.82□□□□□ -2.12
RBBP4Q09028 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.82□□□□□ -2.12
RBBP4Q09028 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
RBBP4Q09028 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
RBBP4Q09028 SNORD115-3-201ENST00000363100 82 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.81□□□□□ -2.12
RBBP4Q09028 SNORA18.2-201ENST00000383865 132 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 SNORD14D-201ENST00000384390 87 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 SNORA64-201ENST00000384674 134 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 MIR518A2-201ENST00000384966 87 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 SNORA12.2-201ENST00000391040 156 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 Y_RNA.594-201ENST00000410373 140 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 RNU4-14P-201ENST00000410858 122 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 HMGN2P19-201ENST00000425149 265 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 AL445646.1-201ENST00000431784 216 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 AC098614.3-201ENST00000438957 440 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 AL035666.1-201ENST00000446195 348 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.81□□□□□ -2.12
RBBP4Q09028 AC107399.1-201ENST00000451226 265 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 AC007215.1-201ENST00000464893 276 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 TOMM22P6-201ENST00000465035 409 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 MTND4P17-201ENST00000470444 350 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.81□□□□□ -2.12
RBBP4Q09028 Y_RNA.670-201ENST00000516255 105 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 RNA5SP490-201ENST00000517141 136 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.81□□□□□ -2.12
RBBP4Q09028 AC005668.1-201ENST00000571142 476 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.81□□□□□ -2.12
RBBP4Q09028 uc_338.5-201ENST00000611839 155 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 AL355073.2-201ENST00000612106 557 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 TPTEP1-208ENST00000636884 213 ntBASIC1.81□□□□□ -2.12
RBBP4Q09028 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RBBP4Q09028 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
RBBP4Q09028 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
RBBP4Q09028 Y_RNA.48-201ENST00000362710 103 ntBASIC1.8□□□□□ -2.12
RBBP4Q09028 RNU6-1159P-201ENST00000362933 107 ntBASIC1.8□□□□□ -2.12
RBBP4Q09028 RNU6-593P-201ENST00000364716 112 ntBASIC1.8□□□□□ -2.12
RBBP4Q09028 RNU4-9P-201ENST00000364951 139 ntBASIC1.8□□□□□ -2.12
RBBP4Q09028 Y_RNA.332-201ENST00000365271 113 ntBASIC1.8□□□□□ -2.12
RBBP4Q09028 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RBBP4Q09028 RNU6-601P-201ENST00000384540 107 ntBASIC1.8□□□□□ -2.12
RBBP4Q09028 AL512604.1-201ENST00000404812 257 ntBASIC1.8□□□□□ -2.12
RBBP4Q09028 AL356432.1-201ENST00000405809 419 ntBASIC1.8□□□□□ -2.12
RBBP4Q09028 AL357139.1-201ENST00000407792 426 ntBASIC1.8□□□□□ -2.12
RBBP4Q09028 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.8□□□□□ -2.12
RBBP4Q09028 MIR1283-2-201ENST00000408621 87 ntBASIC1.8□□□□□ -2.12
RBBP4Q09028 RN7SKP284-201ENST00000411002 343 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms