Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDH1Q08174 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDH1Q08174 RNU6-1305P-201ENST00000364353 104 ntBASIC3.67□□□□□ -1.82
PCDH1Q08174 Y_RNA.337-201ENST00000365312 102 ntBASIC3.67□□□□□ -1.82
PCDH1Q08174 SNORA3.3-201ENST00000408712 125 ntBASIC3.67□□□□□ -1.82
PCDH1Q08174 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDH1Q08174 AC245047.8-201ENST00000456455 284 ntBASIC3.67□□□□□ -1.82
PCDH1Q08174 RPS29P2-201ENST00000479278 136 ntBASIC3.67□□□□□ -1.82
PCDH1Q08174 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDH1Q08174 RAC1P2-201ENST00000511164 579 ntBASIC3.67□□□□□ -1.82
PCDH1Q08174 SNORA31.21-201ENST00000517180 77 ntBASIC3.67□□□□□ -1.82
PCDH1Q08174 CYCSP30-201ENST00000546447 172 ntBASIC3.67□□□□□ -1.82
PCDH1Q08174 MIR5688-201ENST00000580619 83 ntBASIC3.67□□□□□ -1.82
PCDH1Q08174 AL606490.9-201ENST00000603331 271 ntBASIC3.67□□□□□ -1.82
PCDH1Q08174 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDH1Q08174 AC006111.3-201ENST00000622137 383 ntBASIC3.67□□□□□ -1.82
PCDH1Q08174 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
PCDH1Q08174 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDH1Q08174 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDH1Q08174 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDH1Q08174 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDH1Q08174 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.67□□□□□ -1.82
PCDH1Q08174 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDH1Q08174 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDH1Q08174 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PCDH1Q08174 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDH1Q08174 AP002088.1-201ENST00000382740 395 ntBASIC3.66□□□□□ -1.82
PCDH1Q08174 MIR586-201ENST00000385035 97 ntBASIC3.66□□□□□ -1.82
PCDH1Q08174 MTND4LP9-201ENST00000427694 174 ntBASIC3.66□□□□□ -1.82
PCDH1Q08174 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDH1Q08174 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDH1Q08174 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDH1Q08174 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.66□□□□□ -1.82
PCDH1Q08174 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDH1Q08174 SCARNA14-201ENST00000516903 136 ntBASIC3.66□□□□□ -1.82
PCDH1Q08174 AC106785.1-201ENST00000565935 262 ntBASIC3.66□□□□□ -1.82
PCDH1Q08174 MIR6875-201ENST00000617506 72 ntBASIC3.66□□□□□ -1.82
PCDH1Q08174 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDH1Q08174 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDH1Q08174 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDH1Q08174 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
PCDH1Q08174 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PCDH1Q08174 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PCDH1Q08174 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.65□□□□□ -1.82
PCDH1Q08174 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.65□□□□□ -1.82
PCDH1Q08174 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PCDH1Q08174 RNU6-199P-201ENST00000362954 107 ntBASIC3.65□□□□□ -1.83
PCDH1Q08174 MIR134-201ENST00000385258 73 ntBASIC3.65□□□□□ -1.83
PCDH1Q08174 YME1L1P1-201ENST00000429435 297 ntBASIC3.65□□□□□ -1.83
PCDH1Q08174 HMGN2P31-201ENST00000432430 273 ntBASIC3.65□□□□□ -1.83
PCDH1Q08174 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDH1Q08174 AL121914.1-201ENST00000450188 156 ntBASIC3.65□□□□□ -1.83
PCDH1Q08174 AL137159.1-201ENST00000452808 512 ntBASIC3.65□□□□□ -1.83
PCDH1Q08174 SNRPGP3-201ENST00000469405 227 ntBASIC3.65□□□□□ -1.83
PCDH1Q08174 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.83
PCDH1Q08174 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.65□□□□□ -1.83
PCDH1Q08174 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDH1Q08174 MIR5047-201ENST00000579212 100 ntBASIC3.65□□□□□ -1.83
PCDH1Q08174 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDH1Q08174 AL670379.2-201ENST00000604983 252 ntBASIC3.65□□□□□ -1.83
PCDH1Q08174 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDH1Q08174 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PCDH1Q08174 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.83
PCDH1Q08174 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDH1Q08174 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDH1Q08174 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDH1Q08174 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDH1Q08174 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDH1Q08174 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCDH1Q08174 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDH1Q08174 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
PCDH1Q08174 SNORD32B-201ENST00000364460 84 ntBASIC3.64□□□□□ -1.83
PCDH1Q08174 RNA5SP205-201ENST00000364653 136 ntBASIC3.64□□□□□ -1.83
PCDH1Q08174 RNU6-144P-201ENST00000383951 107 ntBASIC3.64□□□□□ -1.83
PCDH1Q08174 RNA5SP424-201ENST00000390988 115 ntBASIC3.64□□□□□ -1.83
PCDH1Q08174 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PCDH1Q08174 AC006461.1-201ENST00000412637 326 ntBASIC3.64□□□□□ -1.83
PCDH1Q08174 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDH1Q08174 RBMY2UP-201ENST00000453474 324 ntBASIC3.64□□□□□ -1.83
PCDH1Q08174 RNU6-971P-201ENST00000516920 106 ntBASIC3.64□□□□□ -1.83
PCDH1Q08174 MIR4724-201ENST00000579485 89 ntBASIC3.64□□□□□ -1.83
PCDH1Q08174 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDH1Q08174 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDH1Q08174 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDH1Q08174 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.63□□□□□ -1.83
PCDH1Q08174 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDH1Q08174 SNORA20-201ENST00000384662 132 ntBASIC3.63□□□□□ -1.83
PCDH1Q08174 MIR1185-2-201ENST00000408687 86 ntBASIC3.63□□□□□ -1.83
PCDH1Q08174 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDH1Q08174 AC097463.2-201ENST00000421074 142 ntBASIC3.63□□□□□ -1.83
PCDH1Q08174 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDH1Q08174 RPS4XP2-201ENST00000458402 793 ntBASIC3.63□□□□□ -1.83
PCDH1Q08174 SNORA84-201ENST00000459229 133 ntBASIC3.63□□□□□ -1.83
PCDH1Q08174 AC006445.1-201ENST00000491925 405 ntBASIC3.63□□□□□ -1.83
PCDH1Q08174 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDH1Q08174 MIR3186-201ENST00000577404 85 ntBASIC3.63□□□□□ -1.83
PCDH1Q08174 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDH1Q08174 MIR5187-201ENST00000583479 76 ntBASIC3.63□□□□□ -1.83
PCDH1Q08174 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDH1Q08174 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms