Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 RNU4-46P-201ENST00000410818 138 ntBASIC0.73□□□□□ -2.29
GTF2BQ00403 POLR2J4-204ENST00000418424 324 ntBASIC0.73□□□□□ -2.29
GTF2BQ00403 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.73□□□□□ -2.29
GTF2BQ00403 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.73□□□□□ -2.29
GTF2BQ00403 GPR143P-201ENST00000434155 205 ntBASIC0.73□□□□□ -2.29
GTF2BQ00403 AC079781.2-201ENST00000446424 169 ntBASIC0.73□□□□□ -2.29
GTF2BQ00403 AC016717.1-201ENST00000448918 286 ntBASIC0.73□□□□□ -2.29
GTF2BQ00403 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.73□□□□□ -2.29
GTF2BQ00403 RNU7-182P-201ENST00000459009 62 ntBASIC0.73□□□□□ -2.29
GTF2BQ00403 AC117454.1-201ENST00000491120 168 ntBASIC0.73□□□□□ -2.29
GTF2BQ00403 AC010486.2-201ENST00000505572 483 ntBASIC0.73□□□□□ -2.29
GTF2BQ00403 RNU2-69P-201ENST00000516061 100 ntBASIC0.73□□□□□ -2.29
GTF2BQ00403 ACA64.5-201ENST00000516207 127 ntBASIC0.73□□□□□ -2.29
GTF2BQ00403 AP003461.1-201ENST00000528866 78 ntBASIC0.73□□□□□ -2.29
GTF2BQ00403 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.73□□□□□ -2.29
GTF2BQ00403 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.73□□□□□ -2.29
GTF2BQ00403 MIR4753-201ENST00000585119 83 ntBASIC0.73□□□□□ -2.29
GTF2BQ00403 AL391834.2-201ENST00000609982 546 ntBASIC0.73□□□□□ -2.29
GTF2BQ00403 AL021879.1-201ENST00000611756 288 ntBASIC0.73□□□□□ -2.29
GTF2BQ00403 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.73□□□□□ -2.29
GTF2BQ00403 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.73□□□□□ -2.29
GTF2BQ00403 RNU1-36P-201ENST00000365130 165 ntBASIC0.72□□□□□ -2.29
GTF2BQ00403 RNU6-74P-201ENST00000384235 107 ntBASIC0.72□□□□□ -2.29
GTF2BQ00403 SNORD70.1-201ENST00000391007 85 ntBASIC0.72□□□□□ -2.29
GTF2BQ00403 RPL21P1-201ENST00000399532 476 ntBASIC0.72□□□□□ -2.29
GTF2BQ00403 RNU6-195P-201ENST00000411352 109 ntBASIC0.72□□□□□ -2.29
GTF2BQ00403 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.72□□□□□ -2.29
GTF2BQ00403 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.72□□□□□ -2.29
GTF2BQ00403 SCARNA16.2-201ENST00000516520 172 ntBASIC0.72□□□□□ -2.29
GTF2BQ00403 SNORA70.22-201ENST00000517160 124 ntBASIC0.72□□□□□ -2.29
GTF2BQ00403 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.72□□□□□ -2.29
GTF2BQ00403 AL137100.2-201ENST00000555786 315 ntBASIC0.72□□□□□ -2.29
GTF2BQ00403 MTCO3P23-201ENST00000561363 289 ntBASIC0.72□□□□□ -2.29
GTF2BQ00403 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.72□□□□□ -2.29
GTF2BQ00403 MIR4661-201ENST00000582720 75 ntBASIC0.72□□□□□ -2.29
GTF2BQ00403 AL929325.1-201ENST00000603096 117 ntBASIC0.72□□□□□ -2.29
GTF2BQ00403 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.72□□□□□ -2.29
GTF2BQ00403 AC016727.2-201ENST00000603988 621 ntBASIC0.72□□□□□ -2.29
GTF2BQ00403 uc_338.11-201ENST00000619132 160 ntBASIC0.72□□□□□ -2.29
GTF2BQ00403 AC009509.4-201ENST00000619202 509 ntBASIC0.72□□□□□ -2.29
GTF2BQ00403 SEPT14P19-203ENST00000633205 211 ntBASIC0.72□□□□□ -2.29
GTF2BQ00403 AC009541.1-201ENST00000438279 2662 ntBASIC0.72□□□□□ -2.29
GTF2BQ00403 RNU6-266P-201ENST00000364225 107 ntBASIC0.71□□□□□ -2.3
GTF2BQ00403 RNU6-434P-201ENST00000384376 107 ntBASIC0.71□□□□□ -2.3
GTF2BQ00403 MIR508-201ENST00000384857 115 ntBASIC0.71□□□□□ -2.3
GTF2BQ00403 MIR1-2-201ENST00000384961 85 ntBASIC0.71□□□□□ -2.3
GTF2BQ00403 SNORA16.2-201ENST00000390991 127 ntBASIC0.71□□□□□ -2.3
GTF2BQ00403 RNA5SP109-201ENST00000391010 116 ntBASIC0.71□□□□□ -2.3
GTF2BQ00403 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
GTF2BQ00403 MTND5P15-201ENST00000434246 349 ntBASIC0.71□□□□□ -2.3
GTF2BQ00403 HMGN2P34-201ENST00000437647 269 ntBASIC0.71□□□□□ -2.3
GTF2BQ00403 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.71□□□□□ -2.3
GTF2BQ00403 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.71□□□□□ -2.3
GTF2BQ00403 snoU13.6-201ENST00000458785 104 ntBASIC0.71□□□□□ -2.3
GTF2BQ00403 RPL39P38-201ENST00000467018 153 ntBASIC0.71□□□□□ -2.3
GTF2BQ00403 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.71□□□□□ -2.3
GTF2BQ00403 SNORD27.1-201ENST00000516319 72 ntBASIC0.71□□□□□ -2.3
GTF2BQ00403 AC004812.1-201ENST00000540773 146 ntBASIC0.71□□□□□ -2.3
GTF2BQ00403 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.71□□□□□ -2.3
GTF2BQ00403 TPRKBP2-201ENST00000565969 475 ntBASIC0.71□□□□□ -2.3
GTF2BQ00403 MIR548AB-201ENST00000584917 84 ntBASIC0.71□□□□□ -2.3
GTF2BQ00403 RSL24D1P11-201ENST00000591045 491 ntBASIC0.71□□□□□ -2.3
GTF2BQ00403 AL078603.1-201ENST00000603824 313 ntBASIC0.71□□□□□ -2.3
GTF2BQ00403 AL590095.2-201ENST00000604136 117 ntBASIC0.71□□□□□ -2.3
GTF2BQ00403 AC021506.2-201ENST00000612354 169 ntBASIC0.71□□□□□ -2.3
GTF2BQ00403 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.71□□□□□ -2.3
GTF2BQ00403 AC010154.1-201ENST00000425857 269 ntBASIC0.7□□□□□ -2.3
GTF2BQ00403 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.7□□□□□ -2.3
GTF2BQ00403 MTATP6P9-201ENST00000515039 680 ntBASIC0.7□□□□□ -2.3
GTF2BQ00403 AC133485.1-201ENST00000567176 124 ntBASIC0.7□□□□□ -2.3
GTF2BQ00403 AC138907.6-201ENST00000568401 126 ntBASIC0.7□□□□□ -2.3
GTF2BQ00403 MIR4714-201ENST00000580728 77 ntBASIC0.7□□□□□ -2.3
GTF2BQ00403 MIR151B-201ENST00000584249 96 ntBASIC0.7□□□□□ -2.3
GTF2BQ00403 MIR4653-201ENST00000585107 83 ntBASIC0.7□□□□□ -2.3
GTF2BQ00403 AL022161.1-201ENST00000604390 213 ntBASIC0.7□□□□□ -2.3
GTF2BQ00403 AC106800.4-201ENST00000614905 153 ntBASIC0.7□□□□□ -2.3
GTF2BQ00403 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.7□□□□□ -2.3
GTF2BQ00403 AC006001.4-201ENST00000622243 395 ntBASIC0.7□□□□□ -2.3
GTF2BQ00403 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.7□□□□□ -2.3
GTF2BQ00403 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
GTF2BQ00403 RNU6-1235P-201ENST00000384559 107 ntBASIC0.69□□□□□ -2.3
GTF2BQ00403 RNU6-1127P-201ENST00000384580 107 ntBASIC0.69□□□□□ -2.3
GTF2BQ00403 RNU6-417P-201ENST00000384712 107 ntBASIC0.69□□□□□ -2.3
GTF2BQ00403 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
GTF2BQ00403 RPS3AP3-201ENST00000411933 242 ntBASIC0.69□□□□□ -2.3
GTF2BQ00403 PIGFP2-201ENST00000421400 651 ntBASIC0.69□□□□□ -2.3
GTF2BQ00403 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.69□□□□□ -2.3
GTF2BQ00403 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.69□□□□□ -2.3
GTF2BQ00403 RNU6-498P-201ENST00000459468 107 ntBASIC0.69□□□□□ -2.3
GTF2BQ00403 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.69□□□□□ -2.3
GTF2BQ00403 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.69□□□□□ -2.3
GTF2BQ00403 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.69□□□□□ -2.3
GTF2BQ00403 SNORA31.2-201ENST00000516019 134 ntBASIC0.69□□□□□ -2.3
GTF2BQ00403 RNA5SP220-201ENST00000516298 104 ntBASIC0.69□□□□□ -2.3
GTF2BQ00403 RNU6-948P-201ENST00000516374 107 ntBASIC0.69□□□□□ -2.3
GTF2BQ00403 AC024995.1-201ENST00000523014 93 ntBASIC0.69□□□□□ -2.3
GTF2BQ00403 AGGF1P4-201ENST00000568249 801 ntBASIC0.69□□□□□ -2.3
GTF2BQ00403 MIR4703-201ENST00000577728 79 ntBASIC0.69□□□□□ -2.3
GTF2BQ00403 MIR3941-201ENST00000582572 103 ntBASIC0.69□□□□□ -2.3
GTF2BQ00403 Z99497.2-201ENST00000603634 310 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms