Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 C8orf59P2-201ENST00000603441 271 ntBASIC1.82□□□□□ -2.12
SRPXP78539 MIR1244-1-201ENST00000612829 85 ntBASIC1.82□□□□□ -2.12
SRPXP78539 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.82□□□□□ -2.12
SRPXP78539 MIR1244-3-201ENST00000635744 85 ntBASIC1.82□□□□□ -2.12
SRPXP78539 MIR1244-2-201ENST00000636449 85 ntBASIC1.82□□□□□ -2.12
SRPXP78539 MIR1244-4-202ENST00000636813 85 ntBASIC1.82□□□□□ -2.12
SRPXP78539 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
SRPXP78539 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
SRPXP78539 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.82□□□□□ -2.12
SRPXP78539 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SRPXP78539 ZNF204P-201ENST00000416749 2397 ntBASIC1.81□□□□□ -2.12
SRPXP78539 RNU4-79P-201ENST00000362764 141 ntBASIC1.81□□□□□ -2.12
SRPXP78539 RNU6-1159P-201ENST00000362933 107 ntBASIC1.81□□□□□ -2.12
SRPXP78539 SNORD115-32-201ENST00000364079 82 ntBASIC1.81□□□□□ -2.12
SRPXP78539 RNU6-99P-201ENST00000364721 107 ntBASIC1.81□□□□□ -2.12
SRPXP78539 Y_RNA.319-201ENST00000365138 92 ntBASIC1.81□□□□□ -2.12
SRPXP78539 RNU6-17P-201ENST00000384245 107 ntBASIC1.81□□□□□ -2.12
SRPXP78539 RNU6-18P-201ENST00000384527 107 ntBASIC1.81□□□□□ -2.12
SRPXP78539 MT-TD-201ENST00000387419 68 ntBASIC1.81□□□□□ -2.12
SRPXP78539 SNORA75.6-201ENST00000391318 127 ntBASIC1.81□□□□□ -2.12
SRPXP78539 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.81□□□□□ -2.12
SRPXP78539 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.81□□□□□ -2.12
SRPXP78539 MTCO3P8-201ENST00000453691 755 ntBASIC1.81□□□□□ -2.12
SRPXP78539 PRELID3BP1-201ENST00000457142 540 ntBASIC1.81□□□□□ -2.12
SRPXP78539 RN7SKP210-201ENST00000459176 261 ntBASIC1.81□□□□□ -2.12
SRPXP78539 AP000870.1-201ENST00000472927 406 ntBASIC1.81□□□□□ -2.12
SRPXP78539 RPS27P21-201ENST00000486977 252 ntBASIC1.81□□□□□ -2.12
SRPXP78539 AC022493.2-201ENST00000506122 481 ntBASIC1.81□□□□□ -2.12
SRPXP78539 RNU7-175P-201ENST00000515915 61 ntBASIC1.81□□□□□ -2.12
SRPXP78539 RNA5SP200-201ENST00000516360 103 ntBASIC1.81□□□□□ -2.12
SRPXP78539 MIR514B-201ENST00000516774 80 ntBASIC1.81□□□□□ -2.12
SRPXP78539 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.81□□□□□ -2.12
SRPXP78539 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.81□□□□□ -2.12
SRPXP78539 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.81□□□□□ -2.12
SRPXP78539 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.81□□□□□ -2.12
SRPXP78539 NDUFA5P6-201ENST00000542110 379 ntBASIC1.81□□□□□ -2.12
SRPXP78539 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.81□□□□□ -2.12
SRPXP78539 AC002984.1-201ENST00000591692 448 ntBASIC1.81□□□□□ -2.12
SRPXP78539 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.81□□□□□ -2.12
SRPXP78539 AC025754.2-201ENST00000606491 432 ntBASIC1.81□□□□□ -2.12
SRPXP78539 RMST_6.1-201ENST00000611980 203 ntBASIC1.81□□□□□ -2.12
SRPXP78539 AC104985.2-201ENST00000620598 500 ntBASIC1.81□□□□□ -2.12
SRPXP78539 AC012640.5-201ENST00000623897 319 ntBASIC1.81□□□□□ -2.12
SRPXP78539 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.81□□□□□ -2.12
SRPXP78539 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SRPXP78539 SNORA16B-201ENST00000364674 135 ntBASIC1.8□□□□□ -2.12
SRPXP78539 RNA5SP138-201ENST00000365098 114 ntBASIC1.8□□□□□ -2.12
SRPXP78539 RNU6-611P-201ENST00000384276 104 ntBASIC1.8□□□□□ -2.12
SRPXP78539 Y_RNA.509-201ENST00000384506 99 ntBASIC1.8□□□□□ -2.12
SRPXP78539 MIR196B-201ENST00000384852 84 ntBASIC1.8□□□□□ -2.12
SRPXP78539 MIR483-201ENST00000385070 76 ntBASIC1.8□□□□□ -2.12
SRPXP78539 MIR153-2-201ENST00000385225 87 ntBASIC1.8□□□□□ -2.12
SRPXP78539 EDDM3CP-201ENST00000415977 425 ntBASIC1.8□□□□□ -2.12
SRPXP78539 AF228730.4-201ENST00000421457 183 ntBASIC1.8□□□□□ -2.12
SRPXP78539 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.8□□□□□ -2.12
SRPXP78539 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.8□□□□□ -2.12
SRPXP78539 AC092423.1-201ENST00000430165 186 ntBASIC1.8□□□□□ -2.12
SRPXP78539 MTND3P23-201ENST00000431980 347 ntBASIC1.8□□□□□ -2.12
SRPXP78539 AC107083.1-201ENST00000439643 279 ntBASIC1.8□□□□□ -2.12
SRPXP78539 AC004386.2-201ENST00000441858 148 ntBASIC1.8□□□□□ -2.12
SRPXP78539 AL035666.1-201ENST00000446195 348 ntBASIC1.8□□□□□ -2.12
SRPXP78539 HMGN2P18-201ENST00000450680 270 ntBASIC1.8□□□□□ -2.12
SRPXP78539 AL021397.1-201ENST00000451806 248 ntBASIC1.8□□□□□ -2.12
SRPXP78539 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.8□□□□□ -2.12
SRPXP78539 MIR2053-201ENST00000459295 91 ntBASIC1.8□□□□□ -2.12
SRPXP78539 AC093259.1-201ENST00000509755 300 ntBASIC1.8□□□□□ -2.12
SRPXP78539 RNU5F-4P-201ENST00000516581 114 ntBASIC1.8□□□□□ -2.12
SRPXP78539 RNU6-58P-201ENST00000517143 103 ntBASIC1.8□□□□□ -2.12
SRPXP78539 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.8□□□□□ -2.12
SRPXP78539 AC104581.2-201ENST00000572227 430 ntBASIC1.8□□□□□ -2.12
SRPXP78539 MIR3200-201ENST00000580767 85 ntBASIC1.8□□□□□ -2.12
SRPXP78539 AC005000.2-201ENST00000605468 310 ntBASIC1.8□□□□□ -2.12
SRPXP78539 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.8□□□□□ -2.12
SRPXP78539 AC135507.2-201ENST00000612443 309 ntBASIC1.8□□□□□ -2.12
SRPXP78539 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.8□□□□□ -2.12
SRPXP78539 AC005562.2-201ENST00000618264 111 ntBASIC1.8□□□□□ -2.12
SRPXP78539 AL137790.1-201ENST00000634283 177 ntBASIC1.8□□□□□ -2.12
SRPXP78539 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SRPXP78539 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
SRPXP78539 AL359851.1-201ENST00000569460 4997 ntBASIC1.79□□□□□ -2.12
SRPXP78539 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SRPXP78539 RNU1-76P-201ENST00000362903 159 ntBASIC1.79□□□□□ -2.12
SRPXP78539 SNORD115-3-201ENST00000363100 82 ntBASIC1.79□□□□□ -2.12
SRPXP78539 Y_RNA.106-201ENST00000363189 100 ntBASIC1.79□□□□□ -2.12
SRPXP78539 Y_RNA.419-201ENST00000384041 102 ntBASIC1.79□□□□□ -2.12
SRPXP78539 MIR128-1-201ENST00000384921 82 ntBASIC1.79□□□□□ -2.12
SRPXP78539 RNU2-52P-201ENST00000410680 190 ntBASIC1.79□□□□□ -2.12
SRPXP78539 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.79□□□□□ -2.12
SRPXP78539 ELOCP24-201ENST00000456370 334 ntBASIC1.79□□□□□ -2.12
SRPXP78539 U8.22-201ENST00000459141 133 ntBASIC1.79□□□□□ -2.12
SRPXP78539 RNU7-14P-201ENST00000459331 62 ntBASIC1.79□□□□□ -2.12
SRPXP78539 AC007215.1-201ENST00000464893 276 ntBASIC1.79□□□□□ -2.12
SRPXP78539 AC105758.1-201ENST00000506038 399 ntBASIC1.79□□□□□ -2.12
SRPXP78539 RNU2-44P-201ENST00000516795 194 ntBASIC1.79□□□□□ -2.12
SRPXP78539 Y_RNA.706-201ENST00000516933 99 ntBASIC1.79□□□□□ -2.12
SRPXP78539 RNA5SP490-201ENST00000517141 136 ntBASIC1.79□□□□□ -2.12
SRPXP78539 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.79□□□□□ -2.12
SRPXP78539 ANP32BP3-201ENST00000559213 706 ntBASIC1.79□□□□□ -2.12
SRPXP78539 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.79□□□□□ -2.12
SRPXP78539 MIR3126-201ENST00000577443 74 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms