Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MTCO1P19-201ENST00000443487 500 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 RPS29P15-201ENST00000458329 171 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 RNU6-528P-201ENST00000516926 100 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 MIR548AO-201ENST00000579992 96 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 AF038458.1-201ENST00000588406 262 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 RNU6-395P-201ENST00000365662 106 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 SNORA75.2-201ENST00000391138 150 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 SNORA75.3-201ENST00000391231 150 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-0.28□□□□□ -2.45
PRKDCP78527 AC006366.1-201ENST00000422002 759 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.28□□□□□ -2.45
PRKDCP78527 RPS23P5-201ENST00000495419 428 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.28□□□□□ -2.45
PRKDCP78527 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.28□□□□□ -2.45
PRKDCP78527 MTND3P19-201ENST00000603825 345 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 AC007014.2-201ENST00000615581 479 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 AC068205.3-201ENST00000636385 468 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 snoZ40.1-201ENST00000364540 72 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 MIR520G-201ENST00000385064 90 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 MIR520H-201ENST00000385126 88 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 RPS20P2-201ENST00000402520 389 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 RNU2-59P-201ENST00000410482 191 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.29□□□□□ -2.46
PRKDCP78527 snoU13.30-201ENST00000458951 104 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.29□□□□□ -2.46
PRKDCP78527 AC109446.1-201ENST00000566172 220 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 BNIP3P30-201ENST00000601184 574 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 AL603839.4-201ENST00000624658 1005 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 SNORD113.3-201ENST00000364630 78 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 RNU6-975P-201ENST00000384296 105 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 MIR186-201ENST00000384988 86 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 RNU7-34P-201ENST00000459394 64 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
PRKDCP78527 TMEM251P1-201ENST00000503717 318 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 AC008628.1-201ENST00000508663 265 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 RNU6-320P-201ENST00000516511 106 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC-0.29□□□□□ -2.46
PRKDCP78527 MIR5697-201ENST00000578045 78 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 MIR1273C-201ENST00000578669 77 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 AL359697.1-201ENST00000624879 587 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 MIR421-201ENST00000365696 85 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 RNU6-735P-201ENST00000410612 107 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 AC016909.1-201ENST00000415916 166 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.29□□□□□ -2.46
PRKDCP78527 LARP1BP3-201ENST00000437229 869 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 OR9P1P-201ENST00000496431 281 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.29□□□□□ -2.46
PRKDCP78527 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
PRKDCP78527 AC074133.1-201ENST00000515696 183 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 RNA5SP180-201ENST00000516181 101 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 AC025678.1-201ENST00000567861 338 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 AC122134.1-202ENST00000569111 1201 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 AC090615.1-201ENST00000577519 154 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 AL606834.3-201ENST00000602615 496 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 AL161798.1-201ENST00000604630 131 ntBASIC-0.29□□□□□ -2.46
PRKDCP78527 SNORA1.1-201ENST00000364671 133 ntBASIC-0.3□□□□□ -2.46
PRKDCP78527 RNU6-40P-201ENST00000384254 107 ntBASIC-0.3□□□□□ -2.46
PRKDCP78527 RNU6-278P-201ENST00000390945 109 ntBASIC-0.3□□□□□ -2.46
PRKDCP78527 AL603865.2-201ENST00000401679 213 ntBASIC-0.3□□□□□ -2.46
PRKDCP78527 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.3□□□□□ -2.46
PRKDCP78527 AC007000.2-201ENST00000442564 487 ntBASIC-0.3□□□□□ -2.46
PRKDCP78527 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.3□□□□□ -2.46
PRKDCP78527 snoU13.27-201ENST00000459278 104 ntBASIC-0.3□□□□□ -2.46
PRKDCP78527 RNU6-922P-201ENST00000516753 99 ntBASIC-0.3□□□□□ -2.46
PRKDCP78527 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.3□□□□□ -2.46
PRKDCP78527 AC138749.5-201ENST00000611461 208 ntBASIC-0.3□□□□□ -2.46
PRKDCP78527 FTX_2.1-201ENST00000618816 94 ntBASIC-0.3□□□□□ -2.46
PRKDCP78527 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.3□□□□□ -2.46
PRKDCP78527 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.3□□□□□ -2.46
PRKDCP78527 AL353752.1-201ENST00000454946 260 ntBASIC-0.3□□□□□ -2.46
PRKDCP78527 AC026616.1-201ENST00000523157 525 ntBASIC-0.3□□□□□ -2.46
PRKDCP78527 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.3□□□□□ -2.46
PRKDCP78527 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.3□□□□□ -2.46
PRKDCP78527 AC005332.6-201ENST00000613178 446 ntBASIC-0.3□□□□□ -2.46
PRKDCP78527 RNU6-925P-201ENST00000384629 104 ntBASIC-0.3□□□□□ -2.46
PRKDCP78527 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.3□□□□□ -2.46
PRKDCP78527 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.3□□□□□ -2.46
PRKDCP78527 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.3□□□□□ -2.46
PRKDCP78527 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-0.3□□□□□ -2.46
PRKDCP78527 AC019178.2-201ENST00000423595 505 ntBASIC-0.3□□□□□ -2.46
PRKDCP78527 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC-0.3□□□□□ -2.46
PRKDCP78527 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.3□□□□□ -2.46
PRKDCP78527 AP002004.2-201ENST00000531656 154 ntBASIC-0.3□□□□□ -2.46
PRKDCP78527 RNU6-1167P-201ENST00000363227 94 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 RNU6-487P-201ENST00000365430 104 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 SNORA40.8-201ENST00000411034 126 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 MTCYBP39-201ENST00000437562 491 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 AC040926.1-201ENST00000530195 238 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 TMF1P1-201ENST00000576058 373 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 AC004223.2-201ENST00000590309 544 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 SNORA25.18-201ENST00000607153 114 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 AL162726.3-218ENST00000636401 95 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 RNU6-543P-201ENST00000362576 108 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 MIR660-201ENST00000385235 97 ntBASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms