Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC106785.1-201ENST00000565935 262 ntBASIC4.41□□□□□ -1.7
USP46P62068 AC025166.1-201ENST00000612411 163 ntBASIC4.41□□□□□ -1.7
USP46P62068 uc_338.14-201ENST00000613162 166 ntBASIC4.41□□□□□ -1.7
USP46P62068 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.41□□□□□ -1.7
USP46P62068 AC058791.1-201ENST00000608412 3198 ntBASIC4.41□□□□□ -1.7
USP46P62068 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.41□□□□□ -1.7
USP46P62068 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP46P62068 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
USP46P62068 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.41□□□□□ -1.7
USP46P62068 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP46P62068 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.41□□□□□ -1.7
USP46P62068 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP46P62068 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
USP46P62068 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.4□□□□□ -1.7
USP46P62068 RNA5SP283-201ENST00000365604 119 ntBASIC4.4□□□□□ -1.71
USP46P62068 SNORA72-201ENST00000384339 132 ntBASIC4.4□□□□□ -1.71
USP46P62068 SNORA57.1-201ENST00000391227 145 ntBASIC4.4□□□□□ -1.71
USP46P62068 MIR1294-201ENST00000408503 142 ntBASIC4.4□□□□□ -1.71
USP46P62068 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.4□□□□□ -1.71
USP46P62068 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.4□□□□□ -1.71
USP46P62068 RPS29P24-201ENST00000486345 171 ntBASIC4.4□□□□□ -1.71
USP46P62068 SNORA18.4-201ENST00000516440 124 ntBASIC4.4□□□□□ -1.71
USP46P62068 VN1R85P-201ENST00000601587 426 ntBASIC4.4□□□□□ -1.71
USP46P62068 AC096577.2-201ENST00000611455 153 ntBASIC4.4□□□□□ -1.71
USP46P62068 AL138721.1-201ENST00000616756 179 ntBASIC4.4□□□□□ -1.71
USP46P62068 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
USP46P62068 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
USP46P62068 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP46P62068 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP46P62068 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP46P62068 Y_RNA.116-201ENST00000363292 103 ntBASIC4.39□□□□□ -1.71
USP46P62068 RNU6-975P-201ENST00000384296 105 ntBASIC4.39□□□□□ -1.71
USP46P62068 SNORA37-201ENST00000384504 129 ntBASIC4.39□□□□□ -1.71
USP46P62068 EIF4EP4-201ENST00000424916 578 ntBASIC4.39□□□□□ -1.71
USP46P62068 HMGN2P31-201ENST00000432430 273 ntBASIC4.39□□□□□ -1.71
USP46P62068 RNA5SP246-201ENST00000458909 119 ntBASIC4.39□□□□□ -1.71
USP46P62068 RPS27P22-201ENST00000478056 241 ntBASIC4.39□□□□□ -1.71
USP46P62068 Y_RNA.677-201ENST00000516401 85 ntBASIC4.39□□□□□ -1.71
USP46P62068 MIR2116-201ENST00000517221 80 ntBASIC4.39□□□□□ -1.71
USP46P62068 AC107934.2-201ENST00000518653 310 ntBASIC4.39□□□□□ -1.71
USP46P62068 IFITM8P-201ENST00000522529 394 ntBASIC4.39□□□□□ -1.71
USP46P62068 AC105245.1-201ENST00000581934 244 ntBASIC4.39□□□□□ -1.71
USP46P62068 MIR7151-201ENST00000617477 60 ntBASIC4.39□□□□□ -1.71
USP46P62068 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP46P62068 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP46P62068 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP46P62068 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.39□□□□□ -1.71
USP46P62068 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.39□□□□□ -1.71
USP46P62068 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
USP46P62068 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.38□□□□□ -1.71
USP46P62068 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
USP46P62068 AL117339.2-201ENST00000430475 180 ntBASIC4.38□□□□□ -1.71
USP46P62068 HLA-N-201ENST00000437516 135 ntBASIC4.38□□□□□ -1.71
USP46P62068 AC010531.2-201ENST00000465012 153 ntBASIC4.38□□□□□ -1.71
USP46P62068 RPS26P15-201ENST00000488067 348 ntBASIC4.38□□□□□ -1.71
USP46P62068 SNORD77.4-201ENST00000516158 81 ntBASIC4.38□□□□□ -1.71
USP46P62068 MIR2681-201ENST00000581814 105 ntBASIC4.38□□□□□ -1.71
USP46P62068 AL022345.2-201ENST00000606307 135 ntBASIC4.38□□□□□ -1.71
USP46P62068 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP46P62068 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP46P62068 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP46P62068 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP46P62068 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USP46P62068 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.37□□□□□ -1.71
USP46P62068 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP46P62068 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USP46P62068 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP46P62068 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.37□□□□□ -1.71
USP46P62068 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.37□□□□□ -1.71
USP46P62068 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP46P62068 Y_RNA.203-201ENST00000364106 102 ntBASIC4.37□□□□□ -1.71
USP46P62068 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
USP46P62068 HSPE1P26-201ENST00000405341 275 ntBASIC4.37□□□□□ -1.71
USP46P62068 U6atac.2-201ENST00000408644 118 ntBASIC4.37□□□□□ -1.71
USP46P62068 SNORA11-201ENST00000408789 128 ntBASIC4.37□□□□□ -1.71
USP46P62068 RNA5SP239-201ENST00000410218 129 ntBASIC4.37□□□□□ -1.71
USP46P62068 RNA5SP38-201ENST00000410750 119 ntBASIC4.37□□□□□ -1.71
USP46P62068 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.37□□□□□ -1.71
USP46P62068 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP46P62068 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.37□□□□□ -1.71
USP46P62068 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP46P62068 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP46P62068 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP46P62068 AC010300.1-201ENST00000600671 5134 ntBASIC4.36□□□□□ -1.71
USP46P62068 RNU1-15P-201ENST00000353977 144 ntBASIC4.36□□□□□ -1.71
USP46P62068 Y_RNA.52-201ENST00000362760 96 ntBASIC4.36□□□□□ -1.71
USP46P62068 RPL21P65-201ENST00000406094 466 ntBASIC4.36□□□□□ -1.71
USP46P62068 RPL23AP46-201ENST00000438548 490 ntBASIC4.36□□□□□ -1.71
USP46P62068 AC006011.1-201ENST00000442758 349 ntBASIC4.36□□□□□ -1.71
USP46P62068 RPL21P10-201ENST00000463521 490 ntBASIC4.36□□□□□ -1.71
USP46P62068 RN7SL604P-201ENST00000492589 296 ntBASIC4.36□□□□□ -1.71
USP46P62068 AC013412.1-201ENST00000610687 192 ntBASIC4.36□□□□□ -1.71
USP46P62068 MTND5P18-201ENST00000445624 1801 ntBASIC4.36□□□□□ -1.71
USP46P62068 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
USP46P62068 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
USP46P62068 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.36□□□□□ -1.71
USP46P62068 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
USP46P62068 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
USP46P62068 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
USP46P62068 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms