Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 RNU1-62P-201ENST00000362599 164 ntBASIC3.58□□□□□ -1.84
ERVFC1P60507 SNORA80A-201ENST00000363922 136 ntBASIC3.58□□□□□ -1.84
ERVFC1P60507 RNU6-818P-201ENST00000364837 108 ntBASIC3.58□□□□□ -1.84
ERVFC1P60507 RNU6-381P-201ENST00000391259 108 ntBASIC3.58□□□□□ -1.84
ERVFC1P60507 RPL26P9-201ENST00000457466 433 ntBASIC3.58□□□□□ -1.84
ERVFC1P60507 SNRPGP7-201ENST00000469016 106 ntBASIC3.58□□□□□ -1.84
ERVFC1P60507 AC091179.3-201ENST00000474761 144 ntBASIC3.58□□□□□ -1.84
ERVFC1P60507 RNU1-61P-201ENST00000516107 151 ntBASIC3.58□□□□□ -1.84
ERVFC1P60507 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.58□□□□□ -1.84
ERVFC1P60507 MIR4431-201ENST00000579990 94 ntBASIC3.58□□□□□ -1.84
ERVFC1P60507 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.58□□□□□ -1.84
ERVFC1P60507 MIR3674-201ENST00000636576 68 ntBASIC3.58□□□□□ -1.84
ERVFC1P60507 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.58□□□□□ -1.84
ERVFC1P60507 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ERVFC1P60507 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.58□□□□□ -1.84
ERVFC1P60507 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ERVFC1P60507 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
ERVFC1P60507 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ERVFC1P60507 Y_RNA.127-201ENST00000363386 109 ntBASIC3.57□□□□□ -1.84
ERVFC1P60507 RNU6-799P-201ENST00000363567 107 ntBASIC3.57□□□□□ -1.84
ERVFC1P60507 RNU6-884P-201ENST00000363889 107 ntBASIC3.57□□□□□ -1.84
ERVFC1P60507 RNU6-622P-201ENST00000384272 103 ntBASIC3.57□□□□□ -1.84
ERVFC1P60507 RNU6-376P-201ENST00000384731 106 ntBASIC3.57□□□□□ -1.84
ERVFC1P60507 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.57□□□□□ -1.84
ERVFC1P60507 RNU4-47P-201ENST00000410876 114 ntBASIC3.57□□□□□ -1.84
ERVFC1P60507 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.57□□□□□ -1.84
ERVFC1P60507 RPS29P31-201ENST00000446147 164 ntBASIC3.57□□□□□ -1.84
ERVFC1P60507 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
ERVFC1P60507 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.57□□□□□ -1.84
ERVFC1P60507 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.57□□□□□ -1.84
ERVFC1P60507 RNU2-12P-201ENST00000517216 168 ntBASIC3.57□□□□□ -1.84
ERVFC1P60507 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.57□□□□□ -1.84
ERVFC1P60507 AP002001.1-203ENST00000534002 267 ntBASIC3.57□□□□□ -1.84
ERVFC1P60507 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.57□□□□□ -1.84
ERVFC1P60507 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.57□□□□□ -1.84
ERVFC1P60507 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.57□□□□□ -1.84
ERVFC1P60507 AC005520.5-201ENST00000613926 164 ntBASIC3.57□□□□□ -1.84
ERVFC1P60507 AF117829.1-206ENST00000621883 3802 ntBASIC3.57□□□□□ -1.84
ERVFC1P60507 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ERVFC1P60507 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
ERVFC1P60507 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.56□□□□□ -1.84
ERVFC1P60507 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.56□□□□□ -1.84
ERVFC1P60507 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ERVFC1P60507 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
ERVFC1P60507 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.56□□□□□ -1.84
ERVFC1P60507 MIR422A-201ENST00000362286 90 ntBASIC3.56□□□□□ -1.84
ERVFC1P60507 RNU6-103P-201ENST00000363686 107 ntBASIC3.56□□□□□ -1.84
ERVFC1P60507 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.56□□□□□ -1.84
ERVFC1P60507 MIR493-201ENST00000385254 89 ntBASIC3.56□□□□□ -1.84
ERVFC1P60507 MIR591-201ENST00000385290 95 ntBASIC3.56□□□□□ -1.84
ERVFC1P60507 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
ERVFC1P60507 AC096649.2-201ENST00000416186 393 ntBASIC3.56□□□□□ -1.84
ERVFC1P60507 RPL39P29-201ENST00000447779 157 ntBASIC3.56□□□□□ -1.84
ERVFC1P60507 RPS20P10-201ENST00000451209 253 ntBASIC3.56□□□□□ -1.84
ERVFC1P60507 AC114982.1-201ENST00000469402 321 ntBASIC3.56□□□□□ -1.84
ERVFC1P60507 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ERVFC1P60507 RN7SKP164-201ENST00000516138 266 ntBASIC3.56□□□□□ -1.84
ERVFC1P60507 RNU6-436P-201ENST00000516171 114 ntBASIC3.56□□□□□ -1.84
ERVFC1P60507 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.56□□□□□ -1.84
ERVFC1P60507 AC026333.2-201ENST00000542164 106 ntBASIC3.56□□□□□ -1.84
ERVFC1P60507 NACAP3-201ENST00000552100 481 ntBASIC3.56□□□□□ -1.84
ERVFC1P60507 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.56□□□□□ -1.84
ERVFC1P60507 AC090897.2-201ENST00000581715 130 ntBASIC3.56□□□□□ -1.84
ERVFC1P60507 AL033523.1-201ENST00000605153 153 ntBASIC3.56□□□□□ -1.84
ERVFC1P60507 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.56□□□□□ -1.84
ERVFC1P60507 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.56□□□□□ -1.84
ERVFC1P60507 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ERVFC1P60507 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.56□□□□□ -1.84
ERVFC1P60507 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.56□□□□□ -1.84
ERVFC1P60507 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
ERVFC1P60507 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ERVFC1P60507 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ERVFC1P60507 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.55□□□□□ -1.84
ERVFC1P60507 RNU6-899P-201ENST00000363947 107 ntBASIC3.55□□□□□ -1.84
ERVFC1P60507 Y_RNA.329-201ENST00000365209 107 ntBASIC3.55□□□□□ -1.84
ERVFC1P60507 RNU6-1280P-201ENST00000365211 107 ntBASIC3.55□□□□□ -1.84
ERVFC1P60507 RNU6-763P-201ENST00000390865 106 ntBASIC3.55□□□□□ -1.84
ERVFC1P60507 RNA5SP475-201ENST00000410568 110 ntBASIC3.55□□□□□ -1.84
ERVFC1P60507 MTND4LP9-201ENST00000427694 174 ntBASIC3.55□□□□□ -1.84
ERVFC1P60507 AC074290.1-201ENST00000448883 135 ntBASIC3.55□□□□□ -1.84
ERVFC1P60507 AL137159.1-201ENST00000452808 512 ntBASIC3.55□□□□□ -1.84
ERVFC1P60507 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.55□□□□□ -1.84
ERVFC1P60507 RPS27AP10-201ENST00000496103 208 ntBASIC3.55□□□□□ -1.84
ERVFC1P60507 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.55□□□□□ -1.84
ERVFC1P60507 Y_RNA.797-201ENST00000515977 94 ntBASIC3.55□□□□□ -1.84
ERVFC1P60507 AC115990.1-201ENST00000526957 301 ntBASIC3.55□□□□□ -1.84
ERVFC1P60507 CYP4A27P-201ENST00000567218 190 ntBASIC3.55□□□□□ -1.84
ERVFC1P60507 MIR3186-201ENST00000577404 85 ntBASIC3.55□□□□□ -1.84
ERVFC1P60507 MIR4744-201ENST00000581563 82 ntBASIC3.55□□□□□ -1.84
ERVFC1P60507 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.55□□□□□ -1.84
ERVFC1P60507 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.55□□□□□ -1.84
ERVFC1P60507 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
ERVFC1P60507 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.55□□□□□ -1.84
ERVFC1P60507 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ERVFC1P60507 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.54□□□□□ -1.84
ERVFC1P60507 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ERVFC1P60507 Y_RNA.218-201ENST00000364218 104 ntBASIC3.54□□□□□ -1.84
ERVFC1P60507 Y_RNA.261-201ENST00000364631 102 ntBASIC3.54□□□□□ -1.84
ERVFC1P60507 RNU6-578P-201ENST00000390980 103 ntBASIC3.54□□□□□ -1.84
ERVFC1P60507 RPL30P13-201ENST00000418873 348 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms