Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RNU6-933P-201ENST00000384424 107 ntBASIC1.89□□□□□ -2.11
PEX3P56589 MIR521-1-201ENST00000384902 87 ntBASIC1.89□□□□□ -2.11
PEX3P56589 RNU6-876P-201ENST00000391295 104 ntBASIC1.89□□□□□ -2.11
PEX3P56589 RNU6-174P-201ENST00000410406 106 ntBASIC1.89□□□□□ -2.11
PEX3P56589 AL358453.1-201ENST00000422522 250 ntBASIC1.89□□□□□ -2.11
PEX3P56589 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.89□□□□□ -2.11
PEX3P56589 FTH1P25-201ENST00000447665 469 ntBASIC1.89□□□□□ -2.11
PEX3P56589 HMGN2P23-201ENST00000456759 269 ntBASIC1.89□□□□□ -2.11
PEX3P56589 PMCHL2-203ENST00000457791 237 ntBASIC1.89□□□□□ -2.11
PEX3P56589 snoU13.23-201ENST00000458863 104 ntBASIC1.89□□□□□ -2.11
PEX3P56589 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.89□□□□□ -2.11
PEX3P56589 CKS1BP2-201ENST00000497342 240 ntBASIC1.89□□□□□ -2.11
PEX3P56589 Y_RNA.682-201ENST00000516457 100 ntBASIC1.89□□□□□ -2.11
PEX3P56589 SNORA25.15-201ENST00000516487 89 ntBASIC1.89□□□□□ -2.11
PEX3P56589 RNU6-567P-201ENST00000516746 107 ntBASIC1.89□□□□□ -2.11
PEX3P56589 RNA5SP137-201ENST00000516833 135 ntBASIC1.89□□□□□ -2.11
PEX3P56589 RNU6-667P-201ENST00000517186 102 ntBASIC1.89□□□□□ -2.11
PEX3P56589 AC118273.2-201ENST00000532092 465 ntBASIC1.89□□□□□ -2.11
PEX3P56589 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.89□□□□□ -2.11
PEX3P56589 DEFB122-202ENST00000569013 197 ntBASIC1.89□□□□□ -2.11
PEX3P56589 MIR3923-201ENST00000579521 83 ntBASIC1.89□□□□□ -2.11
PEX3P56589 MIR3618-201ENST00000580330 88 ntBASIC1.89□□□□□ -2.11
PEX3P56589 MIR4801-201ENST00000582704 82 ntBASIC1.89□□□□□ -2.11
PEX3P56589 AC022202.1-201ENST00000613515 211 ntBASIC1.89□□□□□ -2.11
PEX3P56589 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
PEX3P56589 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
PEX3P56589 Y_RNA.303-201ENST00000364998 94 ntBASIC1.88□□□□□ -2.11
PEX3P56589 RNU6-306P-201ENST00000384617 107 ntBASIC1.88□□□□□ -2.11
PEX3P56589 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.88□□□□□ -2.11
PEX3P56589 EDDM3CP-201ENST00000415977 425 ntBASIC1.88□□□□□ -2.11
PEX3P56589 EIF4EP2-201ENST00000422816 654 ntBASIC1.88□□□□□ -2.11
PEX3P56589 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
PEX3P56589 PPP1R2P5-201ENST00000457256 603 ntBASIC1.88□□□□□ -2.11
PEX3P56589 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.88□□□□□ -2.11
PEX3P56589 SNORA4.4-201ENST00000515921 135 ntBASIC1.88□□□□□ -2.11
PEX3P56589 RNU7-193P-201ENST00000516723 65 ntBASIC1.88□□□□□ -2.11
PEX3P56589 AC015712.3-201ENST00000559380 164 ntBASIC1.88□□□□□ -2.11
PEX3P56589 AC104581.2-201ENST00000572227 430 ntBASIC1.88□□□□□ -2.11
PEX3P56589 MIR4790-201ENST00000577799 79 ntBASIC1.88□□□□□ -2.11
PEX3P56589 MIR5696-201ENST00000578474 85 ntBASIC1.88□□□□□ -2.11
PEX3P56589 AC078899.2-201ENST00000595282 212 ntBASIC1.88□□□□□ -2.11
PEX3P56589 AC025754.2-201ENST00000606491 432 ntBASIC1.88□□□□□ -2.11
PEX3P56589 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.88□□□□□ -2.11
PEX3P56589 AL627230.6-201ENST00000611129 280 ntBASIC1.88□□□□□ -2.11
PEX3P56589 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.88□□□□□ -2.11
PEX3P56589 SCARNA4-201ENST00000629045 128 ntBASIC1.88□□□□□ -2.11
PEX3P56589 SNORD48-201ENST00000364953 64 ntBASIC1.87□□□□□ -2.11
PEX3P56589 SNORD81.2-201ENST00000365153 76 ntBASIC1.87□□□□□ -2.11
PEX3P56589 RNU6-968P-201ENST00000384076 107 ntBASIC1.87□□□□□ -2.11
PEX3P56589 U8.10-201ENST00000384260 133 ntBASIC1.87□□□□□ -2.11
PEX3P56589 RNU6-842P-201ENST00000384269 107 ntBASIC1.87□□□□□ -2.11
PEX3P56589 MIR548F5-201ENST00000408421 86 ntBASIC1.87□□□□□ -2.11
PEX3P56589 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.87□□□□□ -2.11
PEX3P56589 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.87□□□□□ -2.11
PEX3P56589 snoU13.6-201ENST00000458785 104 ntBASIC1.87□□□□□ -2.11
PEX3P56589 HMGN1P12-201ENST00000499125 195 ntBASIC1.87□□□□□ -2.11
PEX3P56589 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.87□□□□□ -2.11
PEX3P56589 MRPS17P9-201ENST00000511924 393 ntBASIC1.87□□□□□ -2.11
PEX3P56589 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.87□□□□□ -2.11
PEX3P56589 RNU6-965P-201ENST00000516721 96 ntBASIC1.87□□□□□ -2.11
PEX3P56589 RNU7-30P-201ENST00000516835 62 ntBASIC1.87□□□□□ -2.11
PEX3P56589 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.87□□□□□ -2.11
PEX3P56589 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.87□□□□□ -2.11
PEX3P56589 DEFB131C-201ENST00000528817 165 ntBASIC1.87□□□□□ -2.11
PEX3P56589 EIF4A1P12-201ENST00000551910 141 ntBASIC1.87□□□□□ -2.11
PEX3P56589 POLR3GP2-201ENST00000588366 668 ntBASIC1.87□□□□□ -2.11
PEX3P56589 RBM11P1-201ENST00000604951 799 ntBASIC1.87□□□□□ -2.11
PEX3P56589 AC019193.3-201ENST00000609144 554 ntBASIC1.87□□□□□ -2.11
PEX3P56589 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.87□□□□□ -2.11
PEX3P56589 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
PEX3P56589 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
PEX3P56589 AP006437.1-201ENST00000641440 3685 ntBASIC1.86□□□□□ -2.11
PEX3P56589 Y_RNA.88-201ENST00000363029 99 ntBASIC1.86□□□□□ -2.11
PEX3P56589 RNU6-1059P-201ENST00000363752 98 ntBASIC1.86□□□□□ -2.11
PEX3P56589 U3.9-201ENST00000363823 204 ntBASIC1.86□□□□□ -2.11
PEX3P56589 RNU4-56P-201ENST00000364700 142 ntBASIC1.86□□□□□ -2.11
PEX3P56589 RNU6-790P-201ENST00000384479 105 ntBASIC1.86□□□□□ -2.11
PEX3P56589 MIR1262-201ENST00000408276 93 ntBASIC1.86□□□□□ -2.11
PEX3P56589 AC243428.1-201ENST00000421099 264 ntBASIC1.86□□□□□ -2.11
PEX3P56589 AL139396.1-201ENST00000421137 167 ntBASIC1.86□□□□□ -2.11
PEX3P56589 USP9YP30-201ENST00000430729 455 ntBASIC1.86□□□□□ -2.11
PEX3P56589 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.86□□□□□ -2.11
PEX3P56589 HMGB1P18-201ENST00000438801 619 ntBASIC1.86□□□□□ -2.11
PEX3P56589 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.86□□□□□ -2.11
PEX3P56589 RPL23AP75-201ENST00000491601 451 ntBASIC1.86□□□□□ -2.11
PEX3P56589 AC108210.2-201ENST00000503681 201 ntBASIC1.86□□□□□ -2.11
PEX3P56589 AC026782.1-201ENST00000512952 449 ntBASIC1.86□□□□□ -2.11
PEX3P56589 SNORA31.25-201ENST00000517242 134 ntBASIC1.86□□□□□ -2.11
PEX3P56589 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.86□□□□□ -2.11
PEX3P56589 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.86□□□□□ -2.11
PEX3P56589 AC018462.2-201ENST00000605375 395 ntBASIC1.86□□□□□ -2.11
PEX3P56589 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.86□□□□□ -2.11
PEX3P56589 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
PEX3P56589 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
PEX3P56589 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PEX3P56589 RNU1-76P-201ENST00000362903 159 ntBASIC1.85□□□□□ -2.11
PEX3P56589 RNU6-593P-201ENST00000364716 112 ntBASIC1.85□□□□□ -2.11
PEX3P56589 RNA5SP190-201ENST00000365222 118 ntBASIC1.85□□□□□ -2.11
PEX3P56589 RPS3AP52-201ENST00000435639 297 ntBASIC1.85□□□□□ -2.11
PEX3P56589 AL353572.1-201ENST00000442490 417 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms