Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.4□□□□□ -2.19
PKNOX1P55347 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.4□□□□□ -2.19
PKNOX1P55347 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.4□□□□□ -2.19
PKNOX1P55347 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.4□□□□□ -2.19
PKNOX1P55347 AC104458.1-201ENST00000608243 463 ntBASIC1.4□□□□□ -2.19
PKNOX1P55347 AC083806.3-201ENST00000614016 455 ntBASIC1.4□□□□□ -2.19
PKNOX1P55347 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.4□□□□□ -2.19
PKNOX1P55347 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
PKNOX1P55347 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
PKNOX1P55347 AL159152.1-201ENST00000635019 2587 ntBASIC1.4□□□□□ -2.19
PKNOX1P55347 AL161722.3-201ENST00000605789 2983 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
PKNOX1P55347 U8.1-201ENST00000362843 134 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 Y_RNA.372-201ENST00000365599 102 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 RNU6-483P-201ENST00000384088 108 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 RNU6-214P-201ENST00000384130 107 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 Y_RNA.559-201ENST00000384686 107 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 MIR549A-201ENST00000385268 96 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 MIR450B-201ENST00000401182 78 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 RNU6-908P-201ENST00000410160 94 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 RNU6-955P-201ENST00000410497 104 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 RNA5SP494-201ENST00000410653 129 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.39□□□□□ -2.19
PKNOX1P55347 AC245047.4-201ENST00000433189 144 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 ERLEC1P1-201ENST00000433806 578 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 HMGB1P18-201ENST00000438801 619 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 SEPT14P3-201ENST00000439401 183 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 MTND2P22-201ENST00000444325 1033 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 AL732372.2-207ENST00000445840 183 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 SEPT14P2-201ENST00000453405 183 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 AC087477.1-201ENST00000465747 340 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 AC025465.3-201ENST00000510570 311 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 SEPT14P4-201ENST00000513445 186 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 Y_RNA.665-201ENST00000516177 98 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 FO082796.1-201ENST00000523795 183 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
PKNOX1P55347 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.39□□□□□ -2.19
PKNOX1P55347 FGF7P1-201ENST00000582820 288 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 AC010525.2-201ENST00000590920 195 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 AC004492.1-201ENST00000607036 742 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 AC103591.3-201ENST00000608684 209 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 AC005562.2-201ENST00000618264 111 ntBASIC1.39□□□□□ -2.19
PKNOX1P55347 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.39□□□□□ -2.19
PKNOX1P55347 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.39□□□□□ -2.19
PKNOX1P55347 RNU6-862P-201ENST00000362804 105 ntBASIC1.38□□□□□ -2.19
PKNOX1P55347 SNORD113-7-201ENST00000363762 77 ntBASIC1.38□□□□□ -2.19
PKNOX1P55347 RNU6-60P-201ENST00000364792 103 ntBASIC1.38□□□□□ -2.19
PKNOX1P55347 RNU6-418P-201ENST00000384035 107 ntBASIC1.38□□□□□ -2.19
PKNOX1P55347 RNU6-968P-201ENST00000384076 107 ntBASIC1.38□□□□□ -2.19
PKNOX1P55347 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
PKNOX1P55347 AL117342.1-201ENST00000404861 406 ntBASIC1.38□□□□□ -2.19
PKNOX1P55347 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.38□□□□□ -2.19
PKNOX1P55347 RPL21P111-201ENST00000418453 477 ntBASIC1.38□□□□□ -2.19
PKNOX1P55347 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.38□□□□□ -2.19
PKNOX1P55347 SNRPEP10-201ENST00000420249 274 ntBASIC1.38□□□□□ -2.19
PKNOX1P55347 AC004386.2-201ENST00000441858 148 ntBASIC1.38□□□□□ -2.19
PKNOX1P55347 ATP5J2P3-201ENST00000451550 258 ntBASIC1.38□□□□□ -2.19
PKNOX1P55347 MTCO1P29-201ENST00000496868 288 ntBASIC1.38□□□□□ -2.19
PKNOX1P55347 AC114801.2-201ENST00000503825 781 ntBASIC1.38□□□□□ -2.19
PKNOX1P55347 RNU6-1281P-201ENST00000516223 105 ntBASIC1.38□□□□□ -2.19
PKNOX1P55347 RNU6-856P-201ENST00000516959 98 ntBASIC1.38□□□□□ -2.19
PKNOX1P55347 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.38□□□□□ -2.19
PKNOX1P55347 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.38□□□□□ -2.19
PKNOX1P55347 HMGB1P33-201ENST00000563485 527 ntBASIC1.38□□□□□ -2.19
PKNOX1P55347 MIR8076-201ENST00000611401 83 ntBASIC1.38□□□□□ -2.19
PKNOX1P55347 MIR8074-201ENST00000615081 81 ntBASIC1.38□□□□□ -2.19
PKNOX1P55347 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.38□□□□□ -2.19
PKNOX1P55347 AC048344.4-201ENST00000619744 527 ntBASIC1.38□□□□□ -2.19
PKNOX1P55347 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
PKNOX1P55347 Y_RNA.41-201ENST00000362646 102 ntBASIC1.37□□□□□ -2.19
PKNOX1P55347 RNU6-254P-201ENST00000363377 107 ntBASIC1.37□□□□□ -2.19
PKNOX1P55347 RNU4-75P-201ENST00000364621 146 ntBASIC1.37□□□□□ -2.19
PKNOX1P55347 RNU6-877P-201ENST00000383868 107 ntBASIC1.37□□□□□ -2.19
PKNOX1P55347 RNU6-784P-201ENST00000384330 106 ntBASIC1.37□□□□□ -2.19
PKNOX1P55347 MIR521-1-201ENST00000384902 87 ntBASIC1.37□□□□□ -2.19
PKNOX1P55347 MIR1283-1-201ENST00000408494 87 ntBASIC1.37□□□□□ -2.19
PKNOX1P55347 MTCO1P21-201ENST00000416634 589 ntBASIC1.37□□□□□ -2.19
PKNOX1P55347 AC060773.1-201ENST00000421698 310 ntBASIC1.37□□□□□ -2.19
PKNOX1P55347 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.37□□□□□ -2.19
PKNOX1P55347 SNRPGP13-201ENST00000442212 177 ntBASIC1.37□□□□□ -2.19
PKNOX1P55347 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.37□□□□□ -2.19
PKNOX1P55347 AL513124.1-201ENST00000450410 614 ntBASIC1.37□□□□□ -2.19
PKNOX1P55347 HSPE1P24-201ENST00000450782 238 ntBASIC1.37□□□□□ -2.19
PKNOX1P55347 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.37□□□□□ -2.19
PKNOX1P55347 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.37□□□□□ -2.19
PKNOX1P55347 snoU13.30-201ENST00000458951 104 ntBASIC1.37□□□□□ -2.19
PKNOX1P55347 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.37□□□□□ -2.19
PKNOX1P55347 AC067942.3-201ENST00000512025 362 ntBASIC1.37□□□□□ -2.19
PKNOX1P55347 RNA5SP437-201ENST00000517249 129 ntBASIC1.37□□□□□ -2.19
PKNOX1P55347 AC024909.2-201ENST00000553035 286 ntBASIC1.37□□□□□ -2.19
PKNOX1P55347 MIR4422-201ENST00000581938 83 ntBASIC1.37□□□□□ -2.19
PKNOX1P55347 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.37□□□□□ -2.19
PKNOX1P55347 AC146944.4-201ENST00000602697 718 ntBASIC1.37□□□□□ -2.19
PKNOX1P55347 AL162413.1-201ENST00000603198 110 ntBASIC1.37□□□□□ -2.19
PKNOX1P55347 AL133215.3-201ENST00000609801 448 ntBASIC1.37□□□□□ -2.19
PKNOX1P55347 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.37□□□□□ -2.19
PKNOX1P55347 Y_RNA.132-201ENST00000363421 102 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 Y_RNA.194-201ENST00000363985 102 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 RNU4-13P-201ENST00000364019 141 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 MIR487A-201ENST00000385009 80 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms