Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 snoU13.30-201ENST00000458951 104 ntBASIC1.37□□□□□ -2.19
CDH4P55283 RNU7-138P-201ENST00000459479 64 ntBASIC1.37□□□□□ -2.19
CDH4P55283 AC007547.1-201ENST00000462177 490 ntBASIC1.37□□□□□ -2.19
CDH4P55283 AC010531.2-201ENST00000465012 153 ntBASIC1.37□□□□□ -2.19
CDH4P55283 AC083798.1-201ENST00000472671 131 ntBASIC1.37□□□□□ -2.19
CDH4P55283 RNA5SP61-201ENST00000516453 100 ntBASIC1.37□□□□□ -2.19
CDH4P55283 RNU6-1038P-201ENST00000516516 104 ntBASIC1.37□□□□□ -2.19
CDH4P55283 RNU6-405P-201ENST00000516637 110 ntBASIC1.37□□□□□ -2.19
CDH4P55283 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.37□□□□□ -2.19
CDH4P55283 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.37□□□□□ -2.19
CDH4P55283 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.37□□□□□ -2.19
CDH4P55283 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.37□□□□□ -2.19
CDH4P55283 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.37□□□□□ -2.19
CDH4P55283 SNORA77B-201ENST00000578179 125 ntBASIC1.37□□□□□ -2.19
CDH4P55283 RPL17P51-201ENST00000605218 238 ntBASIC1.37□□□□□ -2.19
CDH4P55283 Z99129.1-201ENST00000612510 255 ntBASIC1.37□□□□□ -2.19
CDH4P55283 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.37□□□□□ -2.19
CDH4P55283 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CDH4P55283 RNU1-76P-201ENST00000362903 159 ntBASIC1.36□□□□□ -2.19
CDH4P55283 RNU4-20P-201ENST00000365601 151 ntBASIC1.36□□□□□ -2.19
CDH4P55283 RNU6-1093P-201ENST00000391194 107 ntBASIC1.36□□□□□ -2.19
CDH4P55283 AP000275.1-201ENST00000411943 390 ntBASIC1.36□□□□□ -2.19
CDH4P55283 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.36□□□□□ -2.19
CDH4P55283 AC004965.1-201ENST00000413033 213 ntBASIC1.36□□□□□ -2.19
CDH4P55283 SDAD1P3-201ENST00000427380 333 ntBASIC1.36□□□□□ -2.19
CDH4P55283 Z82205.1-201ENST00000428456 297 ntBASIC1.36□□□□□ -2.19
CDH4P55283 JTBP1-201ENST00000441314 247 ntBASIC1.36□□□□□ -2.19
CDH4P55283 MTND1P29-201ENST00000448112 647 ntBASIC1.36□□□□□ -2.19
CDH4P55283 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.36□□□□□ -2.19
CDH4P55283 TPTE2P5-203ENST00000458118 728 ntBASIC1.36□□□□□ -2.19
CDH4P55283 RPL26P26-201ENST00000480251 434 ntBASIC1.36□□□□□ -2.19
CDH4P55283 ICE2P2-201ENST00000483823 2787 ntBASIC1.36□□□□□ -2.19
CDH4P55283 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.36□□□□□ -2.19
CDH4P55283 RPL39P5-202ENST00000512505 151 ntBASIC1.36□□□□□ -2.19
CDH4P55283 RNU6-189P-201ENST00000516120 101 ntBASIC1.36□□□□□ -2.19
CDH4P55283 RNU6-835P-201ENST00000516974 104 ntBASIC1.36□□□□□ -2.19
CDH4P55283 CENPUP1-201ENST00000526649 1202 ntBASIC1.36□□□□□ -2.19
CDH4P55283 AP005597.4-201ENST00000526762 229 ntBASIC1.36□□□□□ -2.19
CDH4P55283 AP003033.1-201ENST00000527244 415 ntBASIC1.36□□□□□ -2.19
CDH4P55283 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.36□□□□□ -2.19
CDH4P55283 PIGPP4-201ENST00000584447 307 ntBASIC1.36□□□□□ -2.19
CDH4P55283 AC023043.2-201ENST00000589678 1026 ntBASIC1.36□□□□□ -2.19
CDH4P55283 PRR13P7-201ENST00000605538 430 ntBASIC1.36□□□□□ -2.19
CDH4P55283 AC009994.1-201ENST00000606889 253 ntBASIC1.36□□□□□ -2.19
CDH4P55283 AC064807.4-201ENST00000607201 407 ntBASIC1.36□□□□□ -2.19
CDH4P55283 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.36□□□□□ -2.19
CDH4P55283 AC103705.1-201ENST00000619013 241 ntBASIC1.36□□□□□ -2.19
CDH4P55283 AL136221.1-201ENST00000621449 509 ntBASIC1.36□□□□□ -2.19
CDH4P55283 AC010615.1-201ENST00000594254 1764 ntBASIC1.36□□□□□ -2.19
CDH4P55283 AC009541.1-201ENST00000438279 2662 ntBASIC1.35□□□□□ -2.19
CDH4P55283 Y_RNA.167-201ENST00000363735 109 ntBASIC1.35□□□□□ -2.19
CDH4P55283 RNU6-82P-201ENST00000363970 107 ntBASIC1.35□□□□□ -2.19
CDH4P55283 Y_RNA.378-201ENST00000365652 113 ntBASIC1.35□□□□□ -2.19
CDH4P55283 RNU6-877P-201ENST00000383868 107 ntBASIC1.35□□□□□ -2.19
CDH4P55283 RNU6-259P-201ENST00000383999 107 ntBASIC1.35□□□□□ -2.19
CDH4P55283 SNORD116-2-201ENST00000384274 95 ntBASIC1.35□□□□□ -2.19
CDH4P55283 SNORD116-6-201ENST00000384711 96 ntBASIC1.35□□□□□ -2.19
CDH4P55283 MIR758-201ENST00000390227 88 ntBASIC1.35□□□□□ -2.19
CDH4P55283 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.35□□□□□ -2.19
CDH4P55283 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.35□□□□□ -2.19
CDH4P55283 USP9YP28-201ENST00000435142 589 ntBASIC1.35□□□□□ -2.19
CDH4P55283 RNU6-261P-201ENST00000459506 102 ntBASIC1.35□□□□□ -2.19
CDH4P55283 RPS26P55-201ENST00000471178 356 ntBASIC1.35□□□□□ -2.19
CDH4P55283 AL163540.1-201ENST00000485382 386 ntBASIC1.35□□□□□ -2.19
CDH4P55283 RNA5SP445-201ENST00000515889 115 ntBASIC1.35□□□□□ -2.19
CDH4P55283 RNU6-1041P-201ENST00000516254 102 ntBASIC1.35□□□□□ -2.19
CDH4P55283 RNU6-1069P-201ENST00000516612 133 ntBASIC1.35□□□□□ -2.19
CDH4P55283 RNA5SP437-201ENST00000517249 129 ntBASIC1.35□□□□□ -2.19
CDH4P55283 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.35□□□□□ -2.19
CDH4P55283 MIR3660-201ENST00000584845 100 ntBASIC1.35□□□□□ -2.19
CDH4P55283 AC016727.1-205ENST00000605437 569 ntBASIC1.35□□□□□ -2.19
CDH4P55283 AC064836.2-201ENST00000609491 462 ntBASIC1.35□□□□□ -2.19
CDH4P55283 AC005520.5-201ENST00000613926 164 ntBASIC1.35□□□□□ -2.19
CDH4P55283 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CDH4P55283 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.35□□□□□ -2.19
CDH4P55283 MTND5P10-201ENST00000603719 1809 ntBASIC1.34□□□□□ -2.19
CDH4P55283 AL391987.6-201ENST00000305671 199 ntBASIC1.34□□□□□ -2.19
CDH4P55283 RNU6-545P-201ENST00000362681 104 ntBASIC1.34□□□□□ -2.19
CDH4P55283 RNU1-96P-201ENST00000364163 162 ntBASIC1.34□□□□□ -2.19
CDH4P55283 Y_RNA.338-201ENST00000365320 114 ntBASIC1.34□□□□□ -2.19
CDH4P55283 SNORA18.2-201ENST00000383865 132 ntBASIC1.34□□□□□ -2.19
CDH4P55283 SNORA69-201ENST00000383895 132 ntBASIC1.34□□□□□ -2.19
CDH4P55283 MIR548B-201ENST00000385247 97 ntBASIC1.34□□□□□ -2.19
CDH4P55283 RNU6-360P-201ENST00000390944 104 ntBASIC1.34□□□□□ -2.19
CDH4P55283 CALM2P3-201ENST00000400429 449 ntBASIC1.34□□□□□ -2.19
CDH4P55283 RPL23AP36-201ENST00000413895 458 ntBASIC1.34□□□□□ -2.19
CDH4P55283 ARL5AP1-201ENST00000418991 388 ntBASIC1.34□□□□□ -2.19
CDH4P55283 AC245047.4-201ENST00000433189 144 ntBASIC1.34□□□□□ -2.19
CDH4P55283 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.34□□□□□ -2.19
CDH4P55283 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.34□□□□□ -2.19
CDH4P55283 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.34□□□□□ -2.19
CDH4P55283 RPS29P27-201ENST00000463711 170 ntBASIC1.34□□□□□ -2.19
CDH4P55283 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.34□□□□□ -2.19
CDH4P55283 AC091435.1-201ENST00000505442 584 ntBASIC1.34□□□□□ -2.19
CDH4P55283 AC108729.3-201ENST00000513484 108 ntBASIC1.34□□□□□ -2.19
CDH4P55283 RNA5SP401-201ENST00000515920 127 ntBASIC1.34□□□□□ -2.19
CDH4P55283 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.34□□□□□ -2.19
CDH4P55283 AL353770.2-201ENST00000620024 78 ntBASIC1.34□□□□□ -2.19
CDH4P55283 MIR6863-201ENST00000636112 90 ntBASIC1.34□□□□□ -2.19
CDH4P55283 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms