Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 AC027288.2-201ENST00000553028 243 ntBASIC3.39□□□□□ -1.87
EPHB4P54760 LINC00933-203ENST00000559812 219 ntBASIC3.39□□□□□ -1.87
EPHB4P54760 UBL5P4-201ENST00000562584 236 ntBASIC3.39□□□□□ -1.87
EPHB4P54760 MIR4423-201ENST00000580922 80 ntBASIC3.39□□□□□ -1.87
EPHB4P54760 MIR4435-1-201ENST00000582552 80 ntBASIC3.39□□□□□ -1.87
EPHB4P54760 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.39□□□□□ -1.87
EPHB4P54760 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.39□□□□□ -1.87
EPHB4P54760 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.39□□□□□ -1.87
EPHB4P54760 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
EPHB4P54760 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
EPHB4P54760 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.38□□□□□ -1.87
EPHB4P54760 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.38□□□□□ -1.87
EPHB4P54760 BX322639.1-202ENST00000423987 2213 ntBASIC3.38□□□□□ -1.87
EPHB4P54760 Y_RNA.319-201ENST00000365138 92 ntBASIC3.38□□□□□ -1.87
EPHB4P54760 DYNLT3P1-201ENST00000378574 347 ntBASIC3.38□□□□□ -1.87
EPHB4P54760 RNY1P5-201ENST00000383890 115 ntBASIC3.38□□□□□ -1.87
EPHB4P54760 SNORA18.3-201ENST00000384122 132 ntBASIC3.38□□□□□ -1.87
EPHB4P54760 Y_RNA.446-201ENST00000384178 104 ntBASIC3.38□□□□□ -1.87
EPHB4P54760 RNU6-1289P-201ENST00000384431 106 ntBASIC3.38□□□□□ -1.87
EPHB4P54760 MIR10B-201ENST00000385011 110 ntBASIC3.38□□□□□ -1.87
EPHB4P54760 SNORD67-201ENST00000390833 111 ntBASIC3.38□□□□□ -1.87
EPHB4P54760 MRPS10P1-201ENST00000448483 130 ntBASIC3.38□□□□□ -1.87
EPHB4P54760 RPL23AP3-201ENST00000453844 468 ntBASIC3.38□□□□□ -1.87
EPHB4P54760 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.38□□□□□ -1.87
EPHB4P54760 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.38□□□□□ -1.87
EPHB4P54760 RNY3P16-201ENST00000516338 101 ntBASIC3.38□□□□□ -1.87
EPHB4P54760 RNU6-703P-201ENST00000516946 107 ntBASIC3.38□□□□□ -1.87
EPHB4P54760 RPL21P9-201ENST00000556149 474 ntBASIC3.38□□□□□ -1.87
EPHB4P54760 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.38□□□□□ -1.87
EPHB4P54760 MIR4282-201ENST00000583613 67 ntBASIC3.38□□□□□ -1.87
EPHB4P54760 MIR4506-201ENST00000584693 77 ntBASIC3.38□□□□□ -1.87
EPHB4P54760 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.38□□□□□ -1.87
EPHB4P54760 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.38□□□□□ -1.87
EPHB4P54760 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
EPHB4P54760 U6.106-201ENST00000636360 105 ntBASIC3.38□□□□□ -1.87
EPHB4P54760 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
EPHB4P54760 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
EPHB4P54760 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
EPHB4P54760 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.37□□□□□ -1.87
EPHB4P54760 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
EPHB4P54760 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
EPHB4P54760 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
EPHB4P54760 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
EPHB4P54760 MIR410-201ENST00000362222 80 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 RNU6-942P-201ENST00000363002 107 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 RNU6-961P-201ENST00000363893 105 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 RNU6-704P-201ENST00000364162 103 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 Y_RNA.304-201ENST00000365011 112 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 RNU6-1175P-201ENST00000365200 107 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 RNU6-281P-201ENST00000384212 103 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 RNU6-1035P-201ENST00000384477 107 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 SNORD116-20-201ENST00000384529 92 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 SNORD15B-201ENST00000384714 146 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 Y_RNA.570-201ENST00000384750 101 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 MIR518D-201ENST00000385014 87 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 RNU6-918P-201ENST00000391219 106 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 MTCO1P5-201ENST00000433573 344 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 AP001324.2-201ENST00000461163 319 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 RNU1-41P-201ENST00000516161 162 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 RNU1-48P-201ENST00000516400 162 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 MIR3144-201ENST00000579460 79 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 AC068831.7-201ENST00000616954 363 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 AC024581.2-201ENST00000619986 252 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 AC006001.4-201ENST00000622243 395 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 SNORA43.4-201ENST00000629559 138 ntBASIC3.37□□□□□ -1.87
EPHB4P54760 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
EPHB4P54760 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.37□□□□□ -1.87
EPHB4P54760 MAPK10-362ENST00000641864 4484 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
EPHB4P54760 MIR22-201ENST00000362190 85 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 SNORD56.1-201ENST00000362913 68 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 Y_RNA.82-201ENST00000363000 102 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 Y_RNA.92-201ENST00000363043 102 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 Y_RNA.235-201ENST00000364412 102 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 Y_RNA.240-201ENST00000364469 95 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 SNORD32A-201ENST00000364805 84 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 Y_RNA.306-201ENST00000365015 102 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 Y_RNA.312-201ENST00000365089 102 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 Y_RNA.322-201ENST00000365151 102 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 Y_RNA.331-201ENST00000365267 102 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 RNU6-142P-201ENST00000384019 107 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 U8.10-201ENST00000384260 133 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 RNU6-1077P-201ENST00000410506 102 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.36□□□□□ -1.87
EPHB4P54760 POLR2KP2-201ENST00000438155 177 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.36□□□□□ -1.87
EPHB4P54760 Y_RNA.650-201ENST00000459002 102 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.36□□□□□ -1.87
EPHB4P54760 RNA5SP385-201ENST00000515947 110 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 RNU6-237P-201ENST00000515985 71 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 Y_RNA.777-201ENST00000516982 102 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.36□□□□□ -1.87
EPHB4P54760 MRPS18CP4-201ENST00000535821 231 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.36□□□□□ -1.87
EPHB4P54760 AL391261.3-201ENST00000557194 520 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 Y_RNA.771-201ENST00000598668 102 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 AC002076.2-201ENST00000617362 122 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 Y_RNA.789-201ENST00000622480 102 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms