Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 Y_RNA.459-201ENST00000384251 102 ntBASIC2.59□□□□□ -1.99
PMS2P54278 SNORA80E-201ENST00000384744 137 ntBASIC2.59□□□□□ -1.99
PMS2P54278 RNU6-1105P-201ENST00000384774 107 ntBASIC2.59□□□□□ -1.99
PMS2P54278 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
PMS2P54278 MIR190B-201ENST00000401119 79 ntBASIC2.59□□□□□ -1.99
PMS2P54278 MIR548F4-201ENST00000408515 105 ntBASIC2.59□□□□□ -1.99
PMS2P54278 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.59□□□□□ -1.99
PMS2P54278 AL513328.1-201ENST00000446460 224 ntBASIC2.59□□□□□ -1.99
PMS2P54278 snoU13.30-201ENST00000458951 104 ntBASIC2.59□□□□□ -1.99
PMS2P54278 AC016632.1-201ENST00000503994 196 ntBASIC2.59□□□□□ -1.99
PMS2P54278 RNU7-175P-201ENST00000515915 61 ntBASIC2.59□□□□□ -1.99
PMS2P54278 IGLV3-17-201ENST00000519099 244 ntBASIC2.59□□□□□ -1.99
PMS2P54278 AC022616.4-201ENST00000522985 181 ntBASIC2.59□□□□□ -1.99
PMS2P54278 AL117187.1-201ENST00000555482 181 ntBASIC2.59□□□□□ -1.99
PMS2P54278 AC023824.2-201ENST00000566185 400 ntBASIC2.59□□□□□ -1.99
PMS2P54278 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.59□□□□□ -1.99
PMS2P54278 AC010928.2-201ENST00000588017 287 ntBASIC2.59□□□□□ -1.99
PMS2P54278 VN1R91P-201ENST00000594377 169 ntBASIC2.59□□□□□ -1.99
PMS2P54278 7SK.7-201ENST00000603504 247 ntBASIC2.59□□□□□ -1.99
PMS2P54278 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.59□□□□□ -2
PMS2P54278 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
PMS2P54278 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
PMS2P54278 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.58□□□□□ -2
PMS2P54278 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.58□□□□□ -2
PMS2P54278 AC092268.1-201ENST00000342691 405 ntBASIC2.58□□□□□ -2
PMS2P54278 RNU6-874P-201ENST00000362390 105 ntBASIC2.58□□□□□ -2
PMS2P54278 Y_RNA.405-201ENST00000383979 100 ntBASIC2.58□□□□□ -2
PMS2P54278 RNU6-968P-201ENST00000384076 107 ntBASIC2.58□□□□□ -2
PMS2P54278 SNORA29-201ENST00000384183 140 ntBASIC2.58□□□□□ -2
PMS2P54278 Y_RNA.451-201ENST00000384200 100 ntBASIC2.58□□□□□ -2
PMS2P54278 Y_RNA.485-201ENST00000384395 102 ntBASIC2.58□□□□□ -2
PMS2P54278 Y_RNA.524-201ENST00000384564 100 ntBASIC2.58□□□□□ -2
PMS2P54278 Y_RNA.561-201ENST00000384694 100 ntBASIC2.58□□□□□ -2
PMS2P54278 RNU6-1072P-201ENST00000384703 107 ntBASIC2.58□□□□□ -2
PMS2P54278 RNU6-443P-201ENST00000384780 107 ntBASIC2.58□□□□□ -2
PMS2P54278 SNORA69.1-201ENST00000390904 137 ntBASIC2.58□□□□□ -2
PMS2P54278 MIR1261-201ENST00000408659 82 ntBASIC2.58□□□□□ -2
PMS2P54278 RNU6-1140P-201ENST00000410517 106 ntBASIC2.58□□□□□ -2
PMS2P54278 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.58□□□□□ -2
PMS2P54278 EIF4EP4-201ENST00000424916 578 ntBASIC2.58□□□□□ -2
PMS2P54278 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.58□□□□□ -2
PMS2P54278 MTND3P2-201ENST00000438452 342 ntBASIC2.58□□□□□ -2
PMS2P54278 RPL39P29-201ENST00000447779 157 ntBASIC2.58□□□□□ -2
PMS2P54278 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.58□□□□□ -2
PMS2P54278 RNU6-1046P-201ENST00000516538 107 ntBASIC2.58□□□□□ -2
PMS2P54278 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.58□□□□□ -2
PMS2P54278 HSPE1P4-201ENST00000550617 308 ntBASIC2.58□□□□□ -2
PMS2P54278 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.58□□□□□ -2
PMS2P54278 AC113195.1-201ENST00000579952 141 ntBASIC2.58□□□□□ -2
PMS2P54278 MIR5188-201ENST00000583467 113 ntBASIC2.58□□□□□ -2
PMS2P54278 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.58□□□□□ -2
PMS2P54278 Z98751.3-201ENST00000604447 521 ntBASIC2.58□□□□□ -2
PMS2P54278 AC100812.1-201ENST00000607622 580 ntBASIC2.58□□□□□ -2
PMS2P54278 RMST_6.1-201ENST00000611980 203 ntBASIC2.58□□□□□ -2
PMS2P54278 MIR1244-1-201ENST00000612829 85 ntBASIC2.58□□□□□ -2
PMS2P54278 MIR6895-201ENST00000613497 78 ntBASIC2.58□□□□□ -2
PMS2P54278 AC008121.3-201ENST00000618726 433 ntBASIC2.58□□□□□ -2
PMS2P54278 MIR1244-3-201ENST00000635744 85 ntBASIC2.58□□□□□ -2
PMS2P54278 MIR1244-2-201ENST00000636449 85 ntBASIC2.58□□□□□ -2
PMS2P54278 MIR1244-4-202ENST00000636813 85 ntBASIC2.58□□□□□ -2
PMS2P54278 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PMS2P54278 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
PMS2P54278 Y_RNA.380-201ENST00000365663 111 ntBASIC2.57□□□□□ -2
PMS2P54278 RNU6-17P-201ENST00000384245 107 ntBASIC2.57□□□□□ -2
PMS2P54278 RNU6-18P-201ENST00000384527 107 ntBASIC2.57□□□□□ -2
PMS2P54278 Y_RNA.527-201ENST00000384573 102 ntBASIC2.57□□□□□ -2
PMS2P54278 RNU6-823P-201ENST00000391042 103 ntBASIC2.57□□□□□ -2
PMS2P54278 Y_RNA.592-201ENST00000410274 109 ntBASIC2.57□□□□□ -2
PMS2P54278 AC092423.1-201ENST00000430165 186 ntBASIC2.57□□□□□ -2
PMS2P54278 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.57□□□□□ -2
PMS2P54278 AC244670.1-201ENST00000436879 112 ntBASIC2.57□□□□□ -2
PMS2P54278 AC011753.1-201ENST00000451001 220 ntBASIC2.57□□□□□ -2
PMS2P54278 snoU13.14-201ENST00000459372 104 ntBASIC2.57□□□□□ -2
PMS2P54278 TRBV12-1-201ENST00000479785 344 ntBASIC2.57□□□□□ -2
PMS2P54278 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.57□□□□□ -2
PMS2P54278 AC115990.1-201ENST00000526957 301 ntBASIC2.57□□□□□ -2
PMS2P54278 AP002770.2-201ENST00000543613 532 ntBASIC2.57□□□□□ -2
PMS2P54278 AC121758.2-201ENST00000553271 193 ntBASIC2.57□□□□□ -2
PMS2P54278 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.57□□□□□ -2
PMS2P54278 AC137590.2-201ENST00000619709 240 ntBASIC2.57□□□□□ -2
PMS2P54278 MIR5739-201ENST00000619803 80 ntBASIC2.57□□□□□ -2
PMS2P54278 AL078596.1-201ENST00000624856 447 ntBASIC2.57□□□□□ -2
PMS2P54278 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
PMS2P54278 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
PMS2P54278 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
PMS2P54278 RNU6-137P-201ENST00000363680 108 ntBASIC2.56□□□□□ -2
PMS2P54278 MIR186-201ENST00000384988 86 ntBASIC2.56□□□□□ -2
PMS2P54278 HMGB3P2-201ENST00000411913 584 ntBASIC2.56□□□□□ -2
PMS2P54278 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.56□□□□□ -2
PMS2P54278 MTCO3P29-201ENST00000432119 779 ntBASIC2.56□□□□□ -2
PMS2P54278 AL121890.1-201ENST00000435457 205 ntBASIC2.56□□□□□ -2
PMS2P54278 Z82188.1-201ENST00000436709 154 ntBASIC2.56□□□□□ -2
PMS2P54278 RPS3P1-201ENST00000456781 192 ntBASIC2.56□□□□□ -2
PMS2P54278 AF186996.7-201ENST00000492781 209 ntBASIC2.56□□□□□ -2
PMS2P54278 AC021146.2-201ENST00000504736 556 ntBASIC2.56□□□□□ -2
PMS2P54278 RNU2-53P-201ENST00000516257 147 ntBASIC2.56□□□□□ -2
PMS2P54278 MIR2355-201ENST00000517199 87 ntBASIC2.56□□□□□ -2
PMS2P54278 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.56□□□□□ -2
PMS2P54278 AC021231.3-201ENST00000558497 370 ntBASIC2.56□□□□□ -2
PMS2P54278 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms