Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 SNORD5.1-201ENST00000458800 75 ntBASIC2.49□□□□□ -2.01
CTCFP49711 SNORD13-201ENST00000459299 104 ntBASIC2.49□□□□□ -2.01
CTCFP49711 AC018868.1-201ENST00000491307 315 ntBASIC2.49□□□□□ -2.01
CTCFP49711 AC145146.1-201ENST00000496370 254 ntBASIC2.49□□□□□ -2.01
CTCFP49711 RPL23AP63-201ENST00000498752 471 ntBASIC2.49□□□□□ -2.01
CTCFP49711 AC021146.2-201ENST00000504736 556 ntBASIC2.49□□□□□ -2.01
CTCFP49711 RNA5SP200-201ENST00000516360 103 ntBASIC2.49□□□□□ -2.01
CTCFP49711 SCARNA16.3-201ENST00000516595 184 ntBASIC2.49□□□□□ -2.01
CTCFP49711 RNU1-54P-201ENST00000517181 120 ntBASIC2.49□□□□□ -2.01
CTCFP49711 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.49□□□□□ -2.01
CTCFP49711 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.49□□□□□ -2.01
CTCFP49711 CYCSP26-201ENST00000534107 320 ntBASIC2.49□□□□□ -2.01
CTCFP49711 AC018630.3-201ENST00000542637 96 ntBASIC2.49□□□□□ -2.01
CTCFP49711 FGF7P1-201ENST00000582820 288 ntBASIC2.49□□□□□ -2.01
CTCFP49711 UBE2V2P2-201ENST00000587677 504 ntBASIC2.49□□□□□ -2.01
CTCFP49711 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.49□□□□□ -2.01
CTCFP49711 AC063943.3-201ENST00000615562 356 ntBASIC2.49□□□□□ -2.01
CTCFP49711 AC012640.5-201ENST00000623897 319 ntBASIC2.49□□□□□ -2.01
CTCFP49711 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CTCFP49711 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CTCFP49711 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.48□□□□□ -2.01
CTCFP49711 MIR21-201ENST00000362134 72 ntBASIC2.48□□□□□ -2.01
CTCFP49711 RNU6-1059P-201ENST00000363752 98 ntBASIC2.48□□□□□ -2.01
CTCFP49711 SNORA3A-201ENST00000364113 130 ntBASIC2.48□□□□□ -2.01
CTCFP49711 RNU1-51P-201ENST00000365345 176 ntBASIC2.48□□□□□ -2.01
CTCFP49711 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CTCFP49711 MIR561-201ENST00000385216 97 ntBASIC2.48□□□□□ -2.01
CTCFP49711 SNORA46.1-201ENST00000391069 153 ntBASIC2.48□□□□□ -2.01
CTCFP49711 RNU2-2P-201ENST00000410396 191 ntBASIC2.48□□□□□ -2.01
CTCFP49711 WARS2P1-201ENST00000429678 537 ntBASIC2.48□□□□□ -2.01
CTCFP49711 USP9YP30-201ENST00000430729 455 ntBASIC2.48□□□□□ -2.01
CTCFP49711 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.48□□□□□ -2.01
CTCFP49711 AC107399.1-201ENST00000451226 265 ntBASIC2.48□□□□□ -2.01
CTCFP49711 AC005741.1-201ENST00000511094 432 ntBASIC2.48□□□□□ -2.01
CTCFP49711 ACA59.1-201ENST00000515966 143 ntBASIC2.48□□□□□ -2.01
CTCFP49711 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.48□□□□□ -2.01
CTCFP49711 U2.15-201ENST00000611544 191 ntBASIC2.48□□□□□ -2.01
CTCFP49711 U2.16-201ENST00000613119 191 ntBASIC2.48□□□□□ -2.01
CTCFP49711 U2.12-201ENST00000613778 191 ntBASIC2.48□□□□□ -2.01
CTCFP49711 U2.20-201ENST00000613956 192 ntBASIC2.48□□□□□ -2.01
CTCFP49711 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.48□□□□□ -2.01
CTCFP49711 U2.9-201ENST00000615427 191 ntBASIC2.48□□□□□ -2.01
CTCFP49711 U2.11-201ENST00000616345 191 ntBASIC2.48□□□□□ -2.01
CTCFP49711 U2.2-201ENST00000616535 191 ntBASIC2.48□□□□□ -2.01
CTCFP49711 U2.3-201ENST00000617785 191 ntBASIC2.48□□□□□ -2.01
CTCFP49711 U2.19-201ENST00000618602 191 ntBASIC2.48□□□□□ -2.01
CTCFP49711 RNU2-1-201ENST00000618664 191 ntBASIC2.48□□□□□ -2.01
CTCFP49711 U2.6-201ENST00000619225 191 ntBASIC2.48□□□□□ -2.01
CTCFP49711 U2.5-201ENST00000619465 191 ntBASIC2.48□□□□□ -2.01
CTCFP49711 U2.10-201ENST00000620268 191 ntBASIC2.48□□□□□ -2.01
CTCFP49711 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CTCFP49711 SNORD32B-201ENST00000364460 84 ntBASIC2.47□□□□□ -2.01
CTCFP49711 RNU6-596P-201ENST00000365395 98 ntBASIC2.47□□□□□ -2.01
CTCFP49711 RNU6-968P-201ENST00000384076 107 ntBASIC2.47□□□□□ -2.01
CTCFP49711 RNU6-842P-201ENST00000384269 107 ntBASIC2.47□□□□□ -2.01
CTCFP49711 Y_RNA.597-201ENST00000410463 100 ntBASIC2.47□□□□□ -2.01
CTCFP49711 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.47□□□□□ -2.01
CTCFP49711 EIF4EP2-201ENST00000422816 654 ntBASIC2.47□□□□□ -2.01
CTCFP49711 AC012306.1-201ENST00000423267 114 ntBASIC2.47□□□□□ -2.01
CTCFP49711 MTATP6P23-201ENST00000440153 476 ntBASIC2.47□□□□□ -2.01
CTCFP49711 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.47□□□□□ -2.01
CTCFP49711 AL137159.1-201ENST00000452808 512 ntBASIC2.47□□□□□ -2.01
CTCFP49711 MTND4P17-201ENST00000470444 350 ntBASIC2.47□□□□□ -2.01
CTCFP49711 AF186996.7-201ENST00000492781 209 ntBASIC2.47□□□□□ -2.01
CTCFP49711 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.47□□□□□ -2.01
CTCFP49711 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.47□□□□□ -2.01
CTCFP49711 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.47□□□□□ -2.01
CTCFP49711 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.47□□□□□ -2.01
CTCFP49711 AC026782.1-201ENST00000512952 449 ntBASIC2.47□□□□□ -2.01
CTCFP49711 RNU6-1016P-201ENST00000516689 94 ntBASIC2.47□□□□□ -2.01
CTCFP49711 RNU6-567P-201ENST00000516746 107 ntBASIC2.47□□□□□ -2.01
CTCFP49711 AC110588.1-201ENST00000559699 137 ntBASIC2.47□□□□□ -2.01
CTCFP49711 CYP4A27P-201ENST00000567218 190 ntBASIC2.47□□□□□ -2.01
CTCFP49711 MIR3923-201ENST00000579521 83 ntBASIC2.47□□□□□ -2.01
CTCFP49711 AC078899.2-201ENST00000595282 212 ntBASIC2.47□□□□□ -2.01
CTCFP49711 AC018462.2-201ENST00000605375 395 ntBASIC2.47□□□□□ -2.01
CTCFP49711 AC092794.2-201ENST00000620933 563 ntBASIC2.47□□□□□ -2.01
CTCFP49711 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CTCFP49711 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.47□□□□□ -2.01
CTCFP49711 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.46□□□□□ -2.01
CTCFP49711 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.46□□□□□ -2.02
CTCFP49711 RNU4-56P-201ENST00000364700 142 ntBASIC2.46□□□□□ -2.02
CTCFP49711 RNU6-593P-201ENST00000364716 112 ntBASIC2.46□□□□□ -2.02
CTCFP49711 RNU6-174P-201ENST00000410406 106 ntBASIC2.46□□□□□ -2.02
CTCFP49711 RNU2-48P-201ENST00000410694 191 ntBASIC2.46□□□□□ -2.02
CTCFP49711 RPL37P10-201ENST00000412884 288 ntBASIC2.46□□□□□ -2.02
CTCFP49711 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.46□□□□□ -2.02
CTCFP49711 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.46□□□□□ -2.02
CTCFP49711 MTND4P18-201ENST00000447010 465 ntBASIC2.46□□□□□ -2.02
CTCFP49711 AC091951.2-201ENST00000500762 203 ntBASIC2.46□□□□□ -2.02
CTCFP49711 AC105029.1-201ENST00000520250 669 ntBASIC2.46□□□□□ -2.02
CTCFP49711 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.46□□□□□ -2.02
CTCFP49711 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.46□□□□□ -2.02
CTCFP49711 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.46□□□□□ -2.02
CTCFP49711 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.46□□□□□ -2.02
CTCFP49711 MIR4452-201ENST00000583004 71 ntBASIC2.46□□□□□ -2.02
CTCFP49711 PCGEM1.1-201ENST00000613431 131 ntBASIC2.46□□□□□ -2.02
CTCFP49711 AC005520.5-201ENST00000613926 164 ntBASIC2.46□□□□□ -2.02
CTCFP49711 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.46□□□□□ -2.02
CTCFP49711 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms