Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC121333.1-201ENST00000567488 2709 ntBASIC0.04□□□□□ -2.4
SRP9P49458 MTND4P5-201ENST00000435821 1374 ntBASIC0.04□□□□□ -2.4
SRP9P49458 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
SRP9P49458 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.03□□□□□ -2.4
SRP9P49458 MIR103A1-201ENST00000362165 78 ntBASIC0.03□□□□□ -2.4
SRP9P49458 RNU6-199P-201ENST00000362954 107 ntBASIC0.03□□□□□ -2.4
SRP9P49458 RNU6-440P-201ENST00000390882 105 ntBASIC0.03□□□□□ -2.4
SRP9P49458 MIR1283-1-201ENST00000408494 87 ntBASIC0.03□□□□□ -2.4
SRP9P49458 AC007283.2-201ENST00000424739 197 ntBASIC0.03□□□□□ -2.4
SRP9P49458 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.03□□□□□ -2.4
SRP9P49458 RPL23AP50-201ENST00000434149 455 ntBASIC0.03□□□□□ -2.4
SRP9P49458 AC245047.8-201ENST00000456455 284 ntBASIC0.03□□□□□ -2.4
SRP9P49458 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.03□□□□□ -2.4
SRP9P49458 MTCO3P27-201ENST00000514397 196 ntBASIC0.03□□□□□ -2.4
SRP9P49458 RNU6-377P-201ENST00000515965 102 ntBASIC0.03□□□□□ -2.4
SRP9P49458 RNU2-34P-201ENST00000516534 121 ntBASIC0.03□□□□□ -2.4
SRP9P49458 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.03□□□□□ -2.4
SRP9P49458 AC024995.1-201ENST00000523014 93 ntBASIC0.03□□□□□ -2.4
SRP9P49458 AL356157.2-201ENST00000605122 111 ntBASIC0.03□□□□□ -2.4
SRP9P49458 AC144521.1-201ENST00000607148 956 ntBASIC0.03□□□□□ -2.4
SRP9P49458 AC104458.1-201ENST00000608243 463 ntBASIC0.03□□□□□ -2.4
SRP9P49458 AC073349.3-201ENST00000617616 186 ntBASIC0.03□□□□□ -2.4
SRP9P49458 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.03□□□□□ -2.4
SRP9P49458 AC068880.4-201ENST00000623082 495 ntBASIC0.03□□□□□ -2.4
SRP9P49458 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
SRP9P49458 RNU6-552P-201ENST00000362869 119 ntBASIC0.02□□□□□ -2.41
SRP9P49458 SNORD114-26-201ENST00000363543 72 ntBASIC0.02□□□□□ -2.41
SRP9P49458 RNU6-723P-201ENST00000383973 107 ntBASIC0.02□□□□□ -2.41
SRP9P49458 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
SRP9P49458 MIR208B-201ENST00000401172 77 ntBASIC0.02□□□□□ -2.41
SRP9P49458 RPL22P18-201ENST00000417197 377 ntBASIC0.02□□□□□ -2.41
SRP9P49458 AC078809.1-201ENST00000427601 140 ntBASIC0.02□□□□□ -2.41
SRP9P49458 AL162725.1-201ENST00000435405 301 ntBASIC0.02□□□□□ -2.41
SRP9P49458 MTND4P15-201ENST00000437913 1033 ntBASIC0.02□□□□□ -2.41
SRP9P49458 AC005002.2-201ENST00000438228 269 ntBASIC0.02□□□□□ -2.41
SRP9P49458 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.02□□□□□ -2.41
SRP9P49458 snoU13.25-201ENST00000458945 104 ntBASIC0.02□□□□□ -2.41
SRP9P49458 RNU6-1146P-201ENST00000516282 102 ntBASIC0.02□□□□□ -2.41
SRP9P49458 RNU7-51P-201ENST00000516560 62 ntBASIC0.02□□□□□ -2.41
SRP9P49458 AC107934.1-201ENST00000522215 217 ntBASIC0.02□□□□□ -2.41
SRP9P49458 AC009712.1-201ENST00000564938 316 ntBASIC0.02□□□□□ -2.41
SRP9P49458 AC131055.1-201ENST00000584626 316 ntBASIC0.02□□□□□ -2.41
SRP9P49458 MIR4753-201ENST00000585119 83 ntBASIC0.02□□□□□ -2.41
SRP9P49458 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.02□□□□□ -2.41
SRP9P49458 Z99497.2-201ENST00000603634 310 ntBASIC0.02□□□□□ -2.41
SRP9P49458 AL357312.1-201ENST00000603879 298 ntBASIC0.02□□□□□ -2.41
SRP9P49458 RPL17P51-201ENST00000605218 238 ntBASIC0.02□□□□□ -2.41
SRP9P49458 AC012467.1-201ENST00000607740 256 ntBASIC0.02□□□□□ -2.41
SRP9P49458 RNU4-41P-201ENST00000364426 143 ntBASIC0.01□□□□□ -2.41
SRP9P49458 SNORD32A-201ENST00000364805 84 ntBASIC0.01□□□□□ -2.41
SRP9P49458 RNU4-45P-201ENST00000365469 141 ntBASIC0.01□□□□□ -2.41
SRP9P49458 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
SRP9P49458 SNORA36A-201ENST00000384221 132 ntBASIC0.01□□□□□ -2.41
SRP9P49458 MIR140-201ENST00000385282 100 ntBASIC0.01□□□□□ -2.41
SRP9P49458 MIR300-201ENST00000401138 83 ntBASIC0.01□□□□□ -2.41
SRP9P49458 MIR1253-201ENST00000408273 105 ntBASIC0.01□□□□□ -2.41
SRP9P49458 AC245047.3-201ENST00000429428 127 ntBASIC0.01□□□□□ -2.41
SRP9P49458 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.01□□□□□ -2.41
SRP9P49458 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.01□□□□□ -2.41
SRP9P49458 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.01□□□□□ -2.41
SRP9P49458 CYCTP-201ENST00000504253 315 ntBASIC0.01□□□□□ -2.41
SRP9P49458 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.01□□□□□ -2.41
SRP9P49458 RBBP4P6-201ENST00000508098 202 ntBASIC0.01□□□□□ -2.41
SRP9P49458 SNORA70.12-201ENST00000516084 153 ntBASIC0.01□□□□□ -2.41
SRP9P49458 RNU6-948P-201ENST00000516374 107 ntBASIC0.01□□□□□ -2.41
SRP9P49458 RNA5SP480-201ENST00000516840 109 ntBASIC0.01□□□□□ -2.41
SRP9P49458 DEFB131C-201ENST00000528817 165 ntBASIC0.01□□□□□ -2.41
SRP9P49458 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.01□□□□□ -2.41
SRP9P49458 AC109810.1-201ENST00000534066 224 ntBASIC0.01□□□□□ -2.41
SRP9P49458 AC087894.1-201ENST00000538359 518 ntBASIC0.01□□□□□ -2.41
SRP9P49458 MTND4LP25-201ENST00000570218 163 ntBASIC0.01□□□□□ -2.41
SRP9P49458 MTATP6P25-201ENST00000574491 261 ntBASIC0.01□□□□□ -2.41
SRP9P49458 MIR5697-201ENST00000578045 78 ntBASIC0.01□□□□□ -2.41
SRP9P49458 AC073539.2-201ENST00000597113 165 ntBASIC0.01□□□□□ -2.41
SRP9P49458 RNU6-88P-201ENST00000606801 100 ntBASIC0.01□□□□□ -2.41
SRP9P49458 AC009994.1-201ENST00000606889 253 ntBASIC0.01□□□□□ -2.41
SRP9P49458 AP002360.4-201ENST00000606980 481 ntBASIC0.01□□□□□ -2.41
SRP9P49458 MIR8087-201ENST00000612745 78 ntBASIC0.01□□□□□ -2.41
SRP9P49458 MIR6718-201ENST00000616153 80 ntBASIC0.01□□□□□ -2.41
SRP9P49458 AL157786.1-207ENST00000627771 695 ntBASIC0.01□□□□□ -2.41
SRP9P49458 RNU6-336P-201ENST00000364891 107 ntBASIC0□□□□□ -2.41
SRP9P49458 RNU6-25P-201ENST00000383873 107 ntBASIC0□□□□□ -2.41
SRP9P49458 RNU6-48P-201ENST00000384161 107 ntBASIC0□□□□□ -2.41
SRP9P49458 RNU6-15P-201ENST00000384534 107 ntBASIC0□□□□□ -2.41
SRP9P49458 RNU6-29P-201ENST00000384637 107 ntBASIC0□□□□□ -2.41
SRP9P49458 RNU6-1067P-201ENST00000384752 107 ntBASIC0□□□□□ -2.41
SRP9P49458 MIR549A-201ENST00000385268 96 ntBASIC0□□□□□ -2.41
SRP9P49458 SNORA26.3-201ENST00000391119 136 ntBASIC0□□□□□ -2.41
SRP9P49458 AL356583.2-201ENST00000426536 280 ntBASIC0□□□□□ -2.41
SRP9P49458 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0□□□□□ -2.41
SRP9P49458 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0□□□□□ -2.41
SRP9P49458 AC022364.2-201ENST00000457963 554 ntBASIC0□□□□□ -2.41
SRP9P49458 Y_RNA.670-201ENST00000516255 105 ntBASIC0□□□□□ -2.41
SRP9P49458 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0□□□□□ -2.41
SRP9P49458 MIR5692A1-201ENST00000580523 69 ntBASIC0□□□□□ -2.41
SRP9P49458 AC234772.3-201ENST00000602277 528 ntBASIC0□□□□□ -2.41
SRP9P49458 AC146944.4-201ENST00000602697 718 ntBASIC0□□□□□ -2.41
SRP9P49458 Z99289.3-201ENST00000605586 594 ntBASIC0□□□□□ -2.41
SRP9P49458 AL139286.2-201ENST00000606838 396 ntBASIC0□□□□□ -2.41
SRP9P49458 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms