Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.29□□□□□ -2.2
CX3CR1P49238 SNORD13-201ENST00000459299 104 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 RNU7-66P-201ENST00000459469 62 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.29□□□□□ -2.2
CX3CR1P49238 AC079140.5-201ENST00000507882 310 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.29□□□□□ -2.2
CX3CR1P49238 RNU6-1332P-201ENST00000516666 104 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.29□□□□□ -2.2
CX3CR1P49238 AC087854.1-201ENST00000519706 414 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.29□□□□□ -2.2
CX3CR1P49238 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.29□□□□□ -2.2
CX3CR1P49238 SCOCP1-201ENST00000554676 349 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 SNORA59B-202ENST00000578183 701 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.29□□□□□ -2.2
CX3CR1P49238 AL158827.2-201ENST00000602494 330 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 RMST_3.1-201ENST00000611651 109 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 AC005520.5-201ENST00000613926 164 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 AC083806.3-201ENST00000614016 455 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 MIR7974-201ENST00000615835 79 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.29□□□□□ -2.2
CX3CR1P49238 AL691447.3-201ENST00000635020 330 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 AC009541.1-201ENST00000438279 2662 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 AC121333.1-201ENST00000567488 2709 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 RNU5B-2P-201ENST00000363036 113 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 Y_RNA.256-201ENST00000364594 104 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 SNORD31B-201ENST00000364977 69 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 Y_RNA.554-201ENST00000384672 102 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 RNU6-325P-201ENST00000411132 105 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 AC004866.1-201ENST00000411748 78 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 AC012306.1-201ENST00000423267 114 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 AL354695.1-201ENST00000427935 228 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 AC099677.2-201ENST00000436385 175 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 HSPE1P9-201ENST00000440046 311 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 AL359672.1-201ENST00000442302 409 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.28□□□□□ -2.2
CX3CR1P49238 RNU6-1037P-201ENST00000459571 107 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 RPL9P9-202ENST00000466501 579 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 RPL26P26-201ENST00000480251 434 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.28□□□□□ -2.2
CX3CR1P49238 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.28□□□□□ -2.2
CX3CR1P49238 RNU6-1281P-201ENST00000516223 105 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 SNORA31.24-201ENST00000517232 57 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 AP000889.1-201ENST00000530968 660 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 AC021231.3-201ENST00000558497 370 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.28□□□□□ -2.2
CX3CR1P49238 CYP4A27P-201ENST00000567218 190 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 CPDP1-201ENST00000579660 283 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CX3CR1P49238 FER-210ENST00000628534 558 ntTSL 5 BASIC1.28□□□□□ -2.2
CX3CR1P49238 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CX3CR1P49238 MTND5P10-201ENST00000603719 1809 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 AL159152.1-201ENST00000635019 2587 ntBASIC1.28□□□□□ -2.2
CX3CR1P49238 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.21
CX3CR1P49238 RNU6-227P-201ENST00000362865 103 ntBASIC1.27□□□□□ -2.21
CX3CR1P49238 RNU6-1252P-201ENST00000363054 104 ntBASIC1.27□□□□□ -2.21
CX3CR1P49238 RNU6-254P-201ENST00000363377 107 ntBASIC1.27□□□□□ -2.21
CX3CR1P49238 Y_RNA.481-201ENST00000384373 102 ntBASIC1.27□□□□□ -2.21
CX3CR1P49238 MIR208B-201ENST00000401172 77 ntBASIC1.27□□□□□ -2.21
CX3CR1P49238 RN7SKP51-201ENST00000410781 304 ntBASIC1.27□□□□□ -2.21
CX3CR1P49238 AL590632.1-201ENST00000424289 371 ntBASIC1.27□□□□□ -2.21
CX3CR1P49238 ERLEC1P1-201ENST00000433806 578 ntBASIC1.27□□□□□ -2.21
CX3CR1P49238 MTND1P1-201ENST00000445453 368 ntBASIC1.27□□□□□ -2.21
CX3CR1P49238 RNU7-187P-201ENST00000458985 68 ntBASIC1.27□□□□□ -2.21
CX3CR1P49238 HMGN2P26-201ENST00000463169 339 ntBASIC1.27□□□□□ -2.21
CX3CR1P49238 RN7SL429P-201ENST00000479090 223 ntBASIC1.27□□□□□ -2.21
CX3CR1P49238 RN7SL489P-201ENST00000486185 223 ntBASIC1.27□□□□□ -2.21
CX3CR1P49238 RN7SL327P-201ENST00000488659 223 ntBASIC1.27□□□□□ -2.21
CX3CR1P49238 RPL36AP21-201ENST00000490372 323 ntBASIC1.27□□□□□ -2.21
CX3CR1P49238 AF186996.7-201ENST00000492781 209 ntBASIC1.27□□□□□ -2.21
CX3CR1P49238 AC091885.1-201ENST00000506658 268 ntBASIC1.27□□□□□ -2.21
CX3CR1P49238 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.27□□□□□ -2.21
CX3CR1P49238 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.27□□□□□ -2.21
CX3CR1P49238 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.27□□□□□ -2.21
CX3CR1P49238 AC015720.1-201ENST00000565251 277 ntBASIC1.27□□□□□ -2.21
CX3CR1P49238 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.27□□□□□ -2.21
CX3CR1P49238 RN7SL853P-201ENST00000617250 223 ntBASIC1.27□□□□□ -2.21
CX3CR1P49238 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.27□□□□□ -2.21
CX3CR1P49238 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
CX3CR1P49238 RNU6-862P-201ENST00000362804 105 ntBASIC1.26□□□□□ -2.21
CX3CR1P49238 RNU1-76P-201ENST00000362903 159 ntBASIC1.26□□□□□ -2.21
CX3CR1P49238 Y_RNA.123-201ENST00000363338 102 ntBASIC1.26□□□□□ -2.21
CX3CR1P49238 SNORD113-7-201ENST00000363762 77 ntBASIC1.26□□□□□ -2.21
CX3CR1P49238 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CX3CR1P49238 SNORA18.2-201ENST00000383865 132 ntBASIC1.26□□□□□ -2.21
CX3CR1P49238 MIR520A-201ENST00000384862 85 ntBASIC1.26□□□□□ -2.21
CX3CR1P49238 RNU6-360P-201ENST00000390944 104 ntBASIC1.26□□□□□ -2.21
CX3CR1P49238 EIF4E2P1-201ENST00000393781 255 ntBASIC1.26□□□□□ -2.21
CX3CR1P49238 MIR1261-201ENST00000408659 82 ntBASIC1.26□□□□□ -2.21
CX3CR1P49238 RNU2-7P-201ENST00000410794 178 ntBASIC1.26□□□□□ -2.21
CX3CR1P49238 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.26□□□□□ -2.21
CX3CR1P49238 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.26□□□□□ -2.21
CX3CR1P49238 JTBP1-201ENST00000441314 247 ntBASIC1.26□□□□□ -2.21
CX3CR1P49238 SNRPGP13-201ENST00000442212 177 ntBASIC1.26□□□□□ -2.21
CX3CR1P49238 AC010095.1-201ENST00000443543 144 ntBASIC1.26□□□□□ -2.21
CX3CR1P49238 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.26□□□□□ -2.21
CX3CR1P49238 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.26□□□□□ -2.21
CX3CR1P49238 AC016925.1-201ENST00000458303 298 ntBASIC1.26□□□□□ -2.21
CX3CR1P49238 AC010531.2-201ENST00000465012 153 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms