Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.04□□□□□ -2.08
LHX1P48742 RPS3AP52-201ENST00000435639 297 ntBASIC2.04□□□□□ -2.08
LHX1P48742 OR2AQ1P-201ENST00000451972 200 ntBASIC2.04□□□□□ -2.08
LHX1P48742 PMCHL2-203ENST00000457791 237 ntBASIC2.04□□□□□ -2.08
LHX1P48742 FO393415.2-201ENST00000480085 343 ntBASIC2.04□□□□□ -2.08
LHX1P48742 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.04□□□□□ -2.08
LHX1P48742 RNU5F-4P-201ENST00000516581 114 ntBASIC2.04□□□□□ -2.08
LHX1P48742 SNORA31.25-201ENST00000517242 134 ntBASIC2.04□□□□□ -2.08
LHX1P48742 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.04□□□□□ -2.08
LHX1P48742 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.04□□□□□ -2.08
LHX1P48742 RPL17P51-201ENST00000605218 238 ntBASIC2.04□□□□□ -2.08
LHX1P48742 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.04□□□□□ -2.08
LHX1P48742 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.04□□□□□ -2.08
LHX1P48742 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.04□□□□□ -2.08
LHX1P48742 DUXAP9-208ENST00000622815 614 ntBASIC2.04□□□□□ -2.08
LHX1P48742 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.04□□□□□ -2.08
LHX1P48742 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.04□□□□□ -2.08
LHX1P48742 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
LHX1P48742 RNU4-9P-201ENST00000364951 139 ntBASIC2.03□□□□□ -2.08
LHX1P48742 RNU6-1283P-201ENST00000365314 105 ntBASIC2.03□□□□□ -2.08
LHX1P48742 MIR29C-201ENST00000385231 88 ntBASIC2.03□□□□□ -2.08
LHX1P48742 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
LHX1P48742 AL445685.2-201ENST00000422551 342 ntBASIC2.03□□□□□ -2.08
LHX1P48742 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.03□□□□□ -2.08
LHX1P48742 HMGN2P18-201ENST00000450680 270 ntBASIC2.03□□□□□ -2.08
LHX1P48742 RNU6-717P-201ENST00000459076 104 ntBASIC2.03□□□□□ -2.08
LHX1P48742 RNU6-1098P-201ENST00000516772 96 ntBASIC2.03□□□□□ -2.08
LHX1P48742 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.03□□□□□ -2.08
LHX1P48742 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.03□□□□□ -2.08
LHX1P48742 AC110588.1-201ENST00000559699 137 ntBASIC2.03□□□□□ -2.08
LHX1P48742 MIR4529-201ENST00000578110 78 ntBASIC2.03□□□□□ -2.08
LHX1P48742 RBM11P1-201ENST00000604951 799 ntBASIC2.03□□□□□ -2.08
LHX1P48742 AC025754.2-201ENST00000606491 432 ntBASIC2.03□□□□□ -2.08
LHX1P48742 uc_338.5-201ENST00000611839 155 ntBASIC2.03□□□□□ -2.08
LHX1P48742 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.03□□□□□ -2.08
LHX1P48742 MIR7843-201ENST00000622274 79 ntBASIC2.03□□□□□ -2.08
LHX1P48742 Y_RNA.99-201ENST00000363138 105 ntBASIC2.02□□□□□ -2.09
LHX1P48742 Y_RNA.166-201ENST00000363730 102 ntBASIC2.02□□□□□ -2.09
LHX1P48742 RNU6-1059P-201ENST00000363752 98 ntBASIC2.02□□□□□ -2.09
LHX1P48742 RNU6-593P-201ENST00000364716 112 ntBASIC2.02□□□□□ -2.09
LHX1P48742 RNU6-596P-201ENST00000365395 98 ntBASIC2.02□□□□□ -2.09
LHX1P48742 SNORA18.2-201ENST00000383865 132 ntBASIC2.02□□□□□ -2.09
LHX1P48742 RNU4-52P-201ENST00000384209 138 ntBASIC2.02□□□□□ -2.09
LHX1P48742 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.02□□□□□ -2.09
LHX1P48742 HMGB1P18-201ENST00000438801 619 ntBASIC2.02□□□□□ -2.09
LHX1P48742 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.02□□□□□ -2.09
LHX1P48742 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.02□□□□□ -2.09
LHX1P48742 SNORD5.1-201ENST00000458800 75 ntBASIC2.02□□□□□ -2.09
LHX1P48742 RNU7-14P-201ENST00000459331 62 ntBASIC2.02□□□□□ -2.09
LHX1P48742 AC107393.1-201ENST00000512403 346 ntBASIC2.02□□□□□ -2.09
LHX1P48742 RNU6-1016P-201ENST00000516689 94 ntBASIC2.02□□□□□ -2.09
LHX1P48742 RNU6-295P-201ENST00000516901 104 ntBASIC2.02□□□□□ -2.09
LHX1P48742 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.02□□□□□ -2.09
LHX1P48742 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.02□□□□□ -2.09
LHX1P48742 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.02□□□□□ -2.09
LHX1P48742 SNRPGP19-201ENST00000603826 189 ntBASIC2.02□□□□□ -2.09
LHX1P48742 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.02□□□□□ -2.09
LHX1P48742 AC022306.2-201ENST00000617563 647 ntBASIC2.02□□□□□ -2.09
LHX1P48742 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.02□□□□□ -2.09
LHX1P48742 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LHX1P48742 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LHX1P48742 Y_RNA.184-201ENST00000363884 108 ntBASIC2.01□□□□□ -2.09
LHX1P48742 Y_RNA.339-201ENST00000365325 102 ntBASIC2.01□□□□□ -2.09
LHX1P48742 RNU6-438P-201ENST00000365561 103 ntBASIC2.01□□□□□ -2.09
LHX1P48742 Y_RNA.390-201ENST00000383932 102 ntBASIC2.01□□□□□ -2.09
LHX1P48742 MIR518A2-201ENST00000384966 87 ntBASIC2.01□□□□□ -2.09
LHX1P48742 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
LHX1P48742 SNORA26.9-201ENST00000391322 122 ntBASIC2.01□□□□□ -2.09
LHX1P48742 RNU6-174P-201ENST00000410406 106 ntBASIC2.01□□□□□ -2.09
LHX1P48742 RPL37P10-201ENST00000412884 288 ntBASIC2.01□□□□□ -2.09
LHX1P48742 AC138393.2-201ENST00000414742 246 ntBASIC2.01□□□□□ -2.09
LHX1P48742 PDCL2P1-201ENST00000419302 352 ntBASIC2.01□□□□□ -2.09
LHX1P48742 AC098614.3-201ENST00000438957 440 ntBASIC2.01□□□□□ -2.09
LHX1P48742 RPS23P5-201ENST00000495419 428 ntBASIC2.01□□□□□ -2.09
LHX1P48742 AC103851.1-201ENST00000506833 274 ntBASIC2.01□□□□□ -2.09
LHX1P48742 ATP5EP1-201ENST00000510257 156 ntBASIC2.01□□□□□ -2.09
LHX1P48742 SNORA20.3-201ENST00000516880 132 ntBASIC2.01□□□□□ -2.09
LHX1P48742 RNU2-19P-201ENST00000517288 84 ntBASIC2.01□□□□□ -2.09
LHX1P48742 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.01□□□□□ -2.09
LHX1P48742 ANP32BP3-201ENST00000559213 706 ntBASIC2.01□□□□□ -2.09
LHX1P48742 AC026470.2-201ENST00000561492 181 ntBASIC2.01□□□□□ -2.09
LHX1P48742 MIR5696-201ENST00000578474 85 ntBASIC2.01□□□□□ -2.09
LHX1P48742 AC007229.1-201ENST00000590455 412 ntBASIC2.01□□□□□ -2.09
LHX1P48742 AC078899.2-201ENST00000595282 212 ntBASIC2.01□□□□□ -2.09
LHX1P48742 7SK.7-201ENST00000603504 247 ntBASIC2.01□□□□□ -2.09
LHX1P48742 AC016727.2-201ENST00000603988 621 ntBASIC2.01□□□□□ -2.09
LHX1P48742 AC018462.2-201ENST00000605375 395 ntBASIC2.01□□□□□ -2.09
LHX1P48742 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.01□□□□□ -2.09
LHX1P48742 AL359314.1-201ENST00000616913 261 ntBASIC2.01□□□□□ -2.09
LHX1P48742 AC005562.2-201ENST00000618264 111 ntBASIC2.01□□□□□ -2.09
LHX1P48742 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
LHX1P48742 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.01□□□□□ -2.09
LHX1P48742 RNU1-76P-201ENST00000362903 159 ntBASIC2□□□□□ -2.09
LHX1P48742 RNU6-1026P-201ENST00000384465 108 ntBASIC2□□□□□ -2.09
LHX1P48742 RNU6-601P-201ENST00000384540 107 ntBASIC2□□□□□ -2.09
LHX1P48742 Y_RNA.533-201ENST00000384596 114 ntBASIC2□□□□□ -2.09
LHX1P48742 MIR32-201ENST00000384965 70 ntBASIC2□□□□□ -2.09
LHX1P48742 SNORA40.18-201ENST00000391200 128 ntBASIC2□□□□□ -2.09
LHX1P48742 AL355497.1-201ENST00000406262 551 ntBASIC2□□□□□ -2.09
LHX1P48742 RNU2-20P-201ENST00000410425 191 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms