Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RNU6-667P-201ENST00000517186 102 ntBASIC2.76□□□□□ -1.97
TM4SF4P48230 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.76□□□□□ -1.97
TM4SF4P48230 AC026271.5-201ENST00000577873 130 ntBASIC2.76□□□□□ -1.97
TM4SF4P48230 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.76□□□□□ -1.97
TM4SF4P48230 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.76□□□□□ -1.97
TM4SF4P48230 AC104985.2-201ENST00000620598 500 ntBASIC2.76□□□□□ -1.97
TM4SF4P48230 RNU6-890P-201ENST00000384121 107 ntBASIC2.75□□□□□ -1.97
TM4SF4P48230 MIR524-201ENST00000385242 87 ntBASIC2.75□□□□□ -1.97
TM4SF4P48230 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.75□□□□□ -1.97
TM4SF4P48230 Z82188.1-201ENST00000436709 154 ntBASIC2.75□□□□□ -1.97
TM4SF4P48230 AC007677.1-201ENST00000445757 515 ntBASIC2.75□□□□□ -1.97
TM4SF4P48230 AP000705.1-201ENST00000454567 350 ntBASIC2.75□□□□□ -1.97
TM4SF4P48230 TOMM22P6-201ENST00000465035 409 ntBASIC2.75□□□□□ -1.97
TM4SF4P48230 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.75□□□□□ -1.97
TM4SF4P48230 AC091144.1-201ENST00000519573 138 ntBASIC2.75□□□□□ -1.97
TM4SF4P48230 AC004584.2-201ENST00000570407 410 ntBASIC2.75□□□□□ -1.97
TM4SF4P48230 AC005014.2-201ENST00000607795 599 ntBASIC2.75□□□□□ -1.97
TM4SF4P48230 AC005562.2-201ENST00000618264 111 ntBASIC2.75□□□□□ -1.97
TM4SF4P48230 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
TM4SF4P48230 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
TM4SF4P48230 AC093831.2-201ENST00000624393 3427 ntBASIC2.74□□□□□ -1.97
TM4SF4P48230 Y_RNA.58-201ENST00000362807 102 ntBASIC2.74□□□□□ -1.97
TM4SF4P48230 Y_RNA.146-201ENST00000363549 102 ntBASIC2.74□□□□□ -1.97
TM4SF4P48230 Y_RNA.154-201ENST00000363624 102 ntBASIC2.74□□□□□ -1.97
TM4SF4P48230 RNU6-743P-201ENST00000364151 106 ntBASIC2.74□□□□□ -1.97
TM4SF4P48230 RNY3P1-201ENST00000365085 102 ntBASIC2.74□□□□□ -1.97
TM4SF4P48230 Y_RNA.315-201ENST00000365117 102 ntBASIC2.74□□□□□ -1.97
TM4SF4P48230 RNU6-234P-201ENST00000365229 104 ntBASIC2.74□□□□□ -1.97
TM4SF4P48230 RNY3-201ENST00000365484 102 ntBASIC2.74□□□□□ -1.97
TM4SF4P48230 Y_RNA.405-201ENST00000383979 100 ntBASIC2.74□□□□□ -1.97
TM4SF4P48230 Y_RNA.451-201ENST00000384200 100 ntBASIC2.74□□□□□ -1.97
TM4SF4P48230 Y_RNA.524-201ENST00000384564 100 ntBASIC2.74□□□□□ -1.97
TM4SF4P48230 Y_RNA.561-201ENST00000384694 100 ntBASIC2.74□□□□□ -1.97
TM4SF4P48230 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
TM4SF4P48230 AC092423.1-201ENST00000430165 186 ntBASIC2.74□□□□□ -1.97
TM4SF4P48230 AC245102.2-201ENST00000448956 180 ntBASIC2.74□□□□□ -1.97
TM4SF4P48230 AL139109.1-201ENST00000455491 297 ntBASIC2.74□□□□□ -1.97
TM4SF4P48230 AC022493.2-201ENST00000506122 481 ntBASIC2.74□□□□□ -1.97
TM4SF4P48230 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.74□□□□□ -1.97
TM4SF4P48230 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.74□□□□□ -1.97
TM4SF4P48230 AC010928.2-201ENST00000588017 287 ntBASIC2.74□□□□□ -1.97
TM4SF4P48230 AL117336.2-201ENST00000602435 335 ntBASIC2.74□□□□□ -1.97
TM4SF4P48230 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.74□□□□□ -1.97
TM4SF4P48230 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
TM4SF4P48230 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.74□□□□□ -1.97
TM4SF4P48230 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
TM4SF4P48230 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TM4SF4P48230 MIR148B-201ENST00000362252 99 ntBASIC2.73□□□□□ -1.97
TM4SF4P48230 RNU6-797P-201ENST00000363101 109 ntBASIC2.73□□□□□ -1.97
TM4SF4P48230 RNU6-137P-201ENST00000363680 108 ntBASIC2.73□□□□□ -1.97
TM4SF4P48230 RNU6-611P-201ENST00000384276 104 ntBASIC2.73□□□□□ -1.97
TM4SF4P48230 SNORA64-201ENST00000384674 134 ntBASIC2.73□□□□□ -1.97
TM4SF4P48230 SNORA26.9-201ENST00000391322 122 ntBASIC2.73□□□□□ -1.97
TM4SF4P48230 AC027124.2-201ENST00000428249 105 ntBASIC2.73□□□□□ -1.97
TM4SF4P48230 MTCO3P29-201ENST00000432119 779 ntBASIC2.73□□□□□ -1.97
TM4SF4P48230 RPS23P5-201ENST00000495419 428 ntBASIC2.73□□□□□ -1.97
TM4SF4P48230 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.73□□□□□ -1.97
TM4SF4P48230 SNORA4.4-201ENST00000515921 135 ntBASIC2.73□□□□□ -1.97
TM4SF4P48230 RNU1-104P-201ENST00000517280 175 ntBASIC2.73□□□□□ -1.97
TM4SF4P48230 AC034114.1-201ENST00000520293 285 ntBASIC2.73□□□□□ -1.97
TM4SF4P48230 AC068657.1-201ENST00000520807 306 ntBASIC2.73□□□□□ -1.97
TM4SF4P48230 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.73□□□□□ -1.97
TM4SF4P48230 FO624990.1-201ENST00000636373 85 ntBASIC2.73□□□□□ -1.97
TM4SF4P48230 MIR219B-201ENST00000637023 88 ntBASIC2.73□□□□□ -1.97
TM4SF4P48230 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
TM4SF4P48230 MTND4P29-201ENST00000503122 1372 ntBASIC2.73□□□□□ -1.97
TM4SF4P48230 ZNF204P-201ENST00000416749 2397 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 RNA5SP393-201ENST00000363423 117 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 RNU6-280P-201ENST00000364145 104 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 RNU6-438P-201ENST00000365561 103 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 RNU6-17P-201ENST00000384245 107 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 RNU6-18P-201ENST00000384527 107 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 MIR625-201ENST00000385047 85 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 U8.13-201ENST00000390842 128 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 USP9YP16-201ENST00000430287 407 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 MTND3P23-201ENST00000431980 347 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 USP9YP23-201ENST00000455085 407 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 MTCO3P10-201ENST00000455912 772 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.72□□□□□ -1.97
TM4SF4P48230 ELOCP24-201ENST00000456370 334 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 RNU7-87P-201ENST00000459343 62 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 AC107032.1-201ENST00000485945 480 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 MIR449C-201ENST00000516047 92 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 RNA5SP490-201ENST00000517141 136 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.72□□□□□ -1.97
TM4SF4P48230 MIR4498-201ENST00000577599 66 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 MIR5007-201ENST00000583098 95 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 MIR5092-201ENST00000583139 88 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 TCL6_2.1-201ENST00000615162 119 ntBASIC2.72□□□□□ -1.97
TM4SF4P48230 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.72□□□□□ -1.97
TM4SF4P48230 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
TM4SF4P48230 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
TM4SF4P48230 RNU4-79P-201ENST00000362764 141 ntBASIC2.71□□□□□ -1.98
TM4SF4P48230 Y_RNA.140-201ENST00000363474 103 ntBASIC2.71□□□□□ -1.98
TM4SF4P48230 SNORA67.1-201ENST00000364749 141 ntBASIC2.71□□□□□ -1.98
TM4SF4P48230 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.71□□□□□ -1.98
TM4SF4P48230 SNORA18.2-201ENST00000383865 132 ntBASIC2.71□□□□□ -1.98
TM4SF4P48230 SNORD116-29-201ENST00000384516 83 ntBASIC2.71□□□□□ -1.98
TM4SF4P48230 MIR190B-201ENST00000401119 79 ntBASIC2.71□□□□□ -1.98
TM4SF4P48230 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms