Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RNU7-14P-201ENST00000459331 62 ntBASIC2.19□□□□□ -2.06
HADHAP40939 snoU13.15-201ENST00000459407 104 ntBASIC2.19□□□□□ -2.06
HADHAP40939 snoU13.26-201ENST00000459452 105 ntBASIC2.19□□□□□ -2.06
HADHAP40939 RPS29P21-201ENST00000496272 170 ntBASIC2.19□□□□□ -2.06
HADHAP40939 IGKV3-31-201ENST00000523109 329 ntBASIC2.19□□□□□ -2.06
HADHAP40939 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.19□□□□□ -2.06
HADHAP40939 MIR3124-201ENST00000582636 67 ntBASIC2.19□□□□□ -2.06
HADHAP40939 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.19□□□□□ -2.06
HADHAP40939 CYP2C61P-201ENST00000604072 290 ntBASIC2.19□□□□□ -2.06
HADHAP40939 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.19□□□□□ -2.06
HADHAP40939 MIR6128-201ENST00000615528 109 ntBASIC2.19□□□□□ -2.06
HADHAP40939 U1.36-201ENST00000620684 176 ntBASIC2.19□□□□□ -2.06
HADHAP40939 AC091932.3-201ENST00000624223 323 ntBASIC2.19□□□□□ -2.06
HADHAP40939 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
HADHAP40939 AC092881.1-201ENST00000638218 2733 ntBASIC2.19□□□□□ -2.06
HADHAP40939 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.18□□□□□ -2.06
HADHAP40939 RNU6-845P-201ENST00000362578 103 ntBASIC2.18□□□□□ -2.06
HADHAP40939 SNORD115-3-201ENST00000363100 82 ntBASIC2.18□□□□□ -2.06
HADHAP40939 RNU5F-3P-201ENST00000363767 117 ntBASIC2.18□□□□□ -2.06
HADHAP40939 RNU6-245P-201ENST00000384020 107 ntBASIC2.18□□□□□ -2.06
HADHAP40939 MIR153-2-201ENST00000385225 87 ntBASIC2.18□□□□□ -2.06
HADHAP40939 MT-TL1-201ENST00000386347 75 ntBASIC2.18□□□□□ -2.06
HADHAP40939 MIR1283-2-201ENST00000408621 87 ntBASIC2.18□□□□□ -2.06
HADHAP40939 RPL21P111-201ENST00000418453 477 ntBASIC2.18□□□□□ -2.06
HADHAP40939 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.18□□□□□ -2.06
HADHAP40939 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.18□□□□□ -2.06
HADHAP40939 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HADHAP40939 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.18□□□□□ -2.06
HADHAP40939 AC010095.1-201ENST00000443543 144 ntBASIC2.18□□□□□ -2.06
HADHAP40939 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.18□□□□□ -2.06
HADHAP40939 RPL23AP3-201ENST00000453844 468 ntBASIC2.18□□□□□ -2.06
HADHAP40939 snoU13.30-201ENST00000458951 104 ntBASIC2.18□□□□□ -2.06
HADHAP40939 RN7SKP210-201ENST00000459176 261 ntBASIC2.18□□□□□ -2.06
HADHAP40939 TOMM22P6-201ENST00000465035 409 ntBASIC2.18□□□□□ -2.06
HADHAP40939 MRPS17P9-201ENST00000511924 393 ntBASIC2.18□□□□□ -2.06
HADHAP40939 SCARNA16.3-201ENST00000516595 184 ntBASIC2.18□□□□□ -2.06
HADHAP40939 RNU6-1016P-201ENST00000516689 94 ntBASIC2.18□□□□□ -2.06
HADHAP40939 RNU2-44P-201ENST00000516795 194 ntBASIC2.18□□□□□ -2.06
HADHAP40939 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.18□□□□□ -2.06
HADHAP40939 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.18□□□□□ -2.06
HADHAP40939 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.18□□□□□ -2.06
HADHAP40939 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.18□□□□□ -2.06
HADHAP40939 uc_338.5-201ENST00000611839 155 ntBASIC2.18□□□□□ -2.06
HADHAP40939 MIR6873-201ENST00000622788 63 ntBASIC2.18□□□□□ -2.06
HADHAP40939 ZNF299P-201ENST00000406845 1804 ntBASIC2.18□□□□□ -2.06
HADHAP40939 KPNA2P1-201ENST00000458289 1591 ntBASIC2.18□□□□□ -2.06
HADHAP40939 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.18□□□□□ -2.06
HADHAP40939 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
HADHAP40939 LINC02555-201ENST00000563933 1951 ntBASIC2.18□□□□□ -2.06
HADHAP40939 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HADHAP40939 SNORA18.2-201ENST00000383865 132 ntBASIC2.17□□□□□ -2.06
HADHAP40939 U8.10-201ENST00000384260 133 ntBASIC2.17□□□□□ -2.06
HADHAP40939 RNU6-306P-201ENST00000384617 107 ntBASIC2.17□□□□□ -2.06
HADHAP40939 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
HADHAP40939 RNU6-876P-201ENST00000391295 104 ntBASIC2.17□□□□□ -2.06
HADHAP40939 AL158823.1-201ENST00000418441 478 ntBASIC2.17□□□□□ -2.06
HADHAP40939 AC027124.2-201ENST00000428249 105 ntBASIC2.17□□□□□ -2.06
HADHAP40939 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.17□□□□□ -2.06
HADHAP40939 AC009237.7-201ENST00000447357 229 ntBASIC2.17□□□□□ -2.06
HADHAP40939 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.17□□□□□ -2.06
HADHAP40939 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.17□□□□□ -2.06
HADHAP40939 ATP5EP1-201ENST00000510257 156 ntBASIC2.17□□□□□ -2.06
HADHAP40939 RNU1-40P-201ENST00000516816 164 ntBASIC2.17□□□□□ -2.06
HADHAP40939 RNU1-97P-201ENST00000516872 164 ntBASIC2.17□□□□□ -2.06
HADHAP40939 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.17□□□□□ -2.06
HADHAP40939 ANP32BP3-201ENST00000559213 706 ntBASIC2.17□□□□□ -2.06
HADHAP40939 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.17□□□□□ -2.06
HADHAP40939 AC008749.1-201ENST00000597650 306 ntBASIC2.17□□□□□ -2.06
HADHAP40939 AC016727.2-201ENST00000603988 621 ntBASIC2.17□□□□□ -2.06
HADHAP40939 AC025754.2-201ENST00000606491 432 ntBASIC2.17□□□□□ -2.06
HADHAP40939 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.17□□□□□ -2.06
HADHAP40939 ZNF702P-202ENST00000434269 1966 ntBASIC2.17□□□□□ -2.06
HADHAP40939 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HADHAP40939 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HADHAP40939 MTND5P6-201ENST00000422338 1798 ntBASIC2.16□□□□□ -2.06
HADHAP40939 AL359851.1-201ENST00000569460 4997 ntBASIC2.16□□□□□ -2.06
HADHAP40939 Y_RNA.482-201ENST00000384377 111 ntBASIC2.16□□□□□ -2.06
HADHAP40939 RNU11-3P-201ENST00000391111 133 ntBASIC2.16□□□□□ -2.06
HADHAP40939 AC243428.1-201ENST00000421099 264 ntBASIC2.16□□□□□ -2.06
HADHAP40939 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.16□□□□□ -2.06
HADHAP40939 AC096638.1-201ENST00000444678 216 ntBASIC2.16□□□□□ -2.06
HADHAP40939 PMCHL2-203ENST00000457791 237 ntBASIC2.16□□□□□ -2.06
HADHAP40939 AC025033.1-201ENST00000463883 194 ntBASIC2.16□□□□□ -2.06
HADHAP40939 RNU2-34P-201ENST00000516534 121 ntBASIC2.16□□□□□ -2.06
HADHAP40939 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.16□□□□□ -2.06
HADHAP40939 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.16□□□□□ -2.06
HADHAP40939 AC018462.2-201ENST00000605375 395 ntBASIC2.16□□□□□ -2.06
HADHAP40939 DUXAP9-208ENST00000622815 614 ntBASIC2.16□□□□□ -2.06
HADHAP40939 AC009487.4-201ENST00000624969 3585 ntBASIC2.16□□□□□ -2.06
HADHAP40939 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
HADHAP40939 RNU6-23P-201ENST00000363283 107 ntBASIC2.15□□□□□ -2.07
HADHAP40939 Y_RNA.132-201ENST00000363421 102 ntBASIC2.15□□□□□ -2.07
HADHAP40939 Y_RNA.339-201ENST00000365325 102 ntBASIC2.15□□□□□ -2.07
HADHAP40939 MIR504-201ENST00000385065 83 ntBASIC2.15□□□□□ -2.07
HADHAP40939 AL033519.2-201ENST00000403958 392 ntBASIC2.15□□□□□ -2.07
HADHAP40939 SNORA11.4-201ENST00000408823 129 ntBASIC2.15□□□□□ -2.07
HADHAP40939 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.15□□□□□ -2.07
HADHAP40939 BX510359.4-201ENST00000423750 193 ntBASIC2.15□□□□□ -2.07
HADHAP40939 AC096920.1-201ENST00000423991 241 ntBASIC2.15□□□□□ -2.07
HADHAP40939 USP9YP30-201ENST00000430729 455 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms