Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.34□□□□□ -2.19
FDFT1P37268 AL161670.1-201ENST00000554348 137 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.34□□□□□ -2.19
FDFT1P37268 AC068338.1-201ENST00000565567 176 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.34□□□□□ -2.19
FDFT1P37268 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.34□□□□□ -2.19
FDFT1P37268 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.34□□□□□ -2.19
FDFT1P37268 AP005136.1-201ENST00000579765 429 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 AC069114.2-201ENST00000604699 304 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 AP001330.5-201ENST00000607176 411 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
FDFT1P37268 AC068205.3-201ENST00000636385 468 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.33□□□□□ -2.2
FDFT1P37268 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
FDFT1P37268 MIR302D-201ENST00000362275 68 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 RNU6-862P-201ENST00000362804 105 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 RNU1-17P-201ENST00000363022 152 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 RNU6-271P-201ENST00000363858 105 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 RNU6-1322P-201ENST00000364309 107 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 RNU6-1329P-201ENST00000365664 107 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 SNORA29-201ENST00000384183 140 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 RNU6-1042P-201ENST00000384204 107 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 MIR520A-201ENST00000384862 85 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 RNU6-360P-201ENST00000390944 104 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.33□□□□□ -2.2
FDFT1P37268 TIMM9P3-201ENST00000428659 274 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 AC015922.2-201ENST00000435593 184 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 AC099677.2-201ENST00000436385 175 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 RNU6-261P-201ENST00000459506 102 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 RPS26P55-201ENST00000471178 356 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 AC083798.1-201ENST00000472671 131 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.33□□□□□ -2.2
FDFT1P37268 SNORA19.2-201ENST00000516013 114 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 AC016256.1-201ENST00000547971 354 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 MTND1P15-201ENST00000579262 949 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 MIR5692C1-201ENST00000585309 91 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.33□□□□□ -2.2
FDFT1P37268 AP001485.1-201ENST00000604799 199 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 PRR13P7-201ENST00000605538 430 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.33□□□□□ -2.2
FDFT1P37268 RNU6-562P-201ENST00000362731 107 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 Y_RNA.123-201ENST00000363338 102 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 RNU4-20P-201ENST00000365601 151 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 RNU6-418P-201ENST00000384035 107 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 RNU6-1119P-201ENST00000384349 108 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 RNA5SP494-201ENST00000410653 129 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 RNU2-7P-201ENST00000410794 178 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 MTCO1P21-201ENST00000416634 589 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 RPL30P13-201ENST00000418873 348 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 SDAD1P3-201ENST00000427380 333 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.32□□□□□ -2.2
FDFT1P37268 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.32□□□□□ -2.2
FDFT1P37268 AC098826.2-201ENST00000452011 651 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 snoU13.30-201ENST00000458951 104 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 SRRM1P2-201ENST00000464531 1192 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 RPL36AP21-201ENST00000490372 323 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 Y_RNA.654-201ENST00000497848 106 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 RNA5SP458-201ENST00000516188 119 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 RNU6-1041P-201ENST00000516254 102 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.32□□□□□ -2.2
FDFT1P37268 DEFB131C-201ENST00000528817 165 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.32□□□□□ -2.2
FDFT1P37268 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.32□□□□□ -2.2
FDFT1P37268 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.32□□□□□ -2.2
FDFT1P37268 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.32□□□□□ -2.2
FDFT1P37268 AC010620.1-201ENST00000601088 1102 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.32□□□□□ -2.2
FDFT1P37268 FER-210ENST00000628534 558 ntTSL 5 BASIC1.32□□□□□ -2.2
FDFT1P37268 MIR6863-201ENST00000636112 90 ntBASIC1.32□□□□□ -2.2
FDFT1P37268 RNU6-457P-201ENST00000363999 107 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 SNORD116-9-201ENST00000384000 95 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 SNORD116-3-201ENST00000384287 95 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 Y_RNA.481-201ENST00000384373 102 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 SNORD116-7-201ENST00000384404 95 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 SNORD116-5-201ENST00000384462 95 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 MRPS10P2-201ENST00000431226 381 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 HSPE1P9-201ENST00000440046 311 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 AL359672.1-201ENST00000442302 409 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 RNU1-92P-201ENST00000517017 135 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 SCOCP1-201ENST00000554676 349 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 AL157687.1-201ENST00000554853 619 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 AC008269.2-201ENST00000561915 1105 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 SUB1P3-201ENST00000564581 315 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 AC104458.1-201ENST00000608243 463 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 AC092807.2-201ENST00000609367 243 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 AC005562.2-201ENST00000618264 111 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 AL158209.2-201ENST00000619266 216 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 AL121890.5-201ENST00000620848 304 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 AC022079.1-201ENST00000621546 602 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 AC010615.1-201ENST00000594254 1764 ntBASIC1.31□□□□□ -2.2
FDFT1P37268 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
FDFT1P37268 ICE2P2-201ENST00000483823 2787 ntBASIC1.3□□□□□ -2.2
FDFT1P37268 SNORD33-201ENST00000362761 85 ntBASIC1.3□□□□□ -2.2
FDFT1P37268 RNU1-96P-201ENST00000364163 162 ntBASIC1.3□□□□□ -2.2
FDFT1P37268 RNU6-968P-201ENST00000384076 107 ntBASIC1.3□□□□□ -2.2
FDFT1P37268 RNU6-214P-201ENST00000384130 107 ntBASIC1.3□□□□□ -2.2
FDFT1P37268 U8.10-201ENST00000384260 133 ntBASIC1.3□□□□□ -2.2
FDFT1P37268 MIR150-201ENST00000385048 84 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms