Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 MIR190B-201ENST00000401119 79 ntBASIC2.53□□□□□ -2
RFC1P35251 AC096644.2-201ENST00000429278 159 ntBASIC2.53□□□□□ -2
RFC1P35251 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.53□□□□□ -2
RFC1P35251 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.53□□□□□ -2
RFC1P35251 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.53□□□□□ -2
RFC1P35251 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.53□□□□□ -2
RFC1P35251 RNU7-175P-201ENST00000515915 61 ntBASIC2.53□□□□□ -2
RFC1P35251 RNU6-1137P-201ENST00000517073 99 ntBASIC2.53□□□□□ -2
RFC1P35251 MTND4P1-201ENST00000457501 1466 ntBASIC2.52□□□□□ -2.01
RFC1P35251 Y_RNA.202-201ENST00000364083 110 ntBASIC2.52□□□□□ -2.01
RFC1P35251 RNA5SP125-201ENST00000364843 120 ntBASIC2.52□□□□□ -2.01
RFC1P35251 Y_RNA.314-201ENST00000365114 102 ntBASIC2.52□□□□□ -2.01
RFC1P35251 AL590004.1-201ENST00000405321 300 ntBASIC2.52□□□□□ -2.01
RFC1P35251 MTCYBP2-201ENST00000407745 171 ntBASIC2.52□□□□□ -2.01
RFC1P35251 RNA5SP201-201ENST00000410316 124 ntBASIC2.52□□□□□ -2.01
RFC1P35251 AC003685.2-201ENST00000422795 395 ntBASIC2.52□□□□□ -2.01
RFC1P35251 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RFC1P35251 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.52□□□□□ -2.01
RFC1P35251 U8.22-201ENST00000459141 133 ntBASIC2.52□□□□□ -2.01
RFC1P35251 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.52□□□□□ -2.01
RFC1P35251 RPL30P11-203ENST00000598995 310 ntBASIC2.52□□□□□ -2.01
RFC1P35251 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.52□□□□□ -2.01
RFC1P35251 AC016925.2-201ENST00000605108 242 ntBASIC2.52□□□□□ -2.01
RFC1P35251 AC100812.1-201ENST00000607622 580 ntBASIC2.52□□□□□ -2.01
RFC1P35251 AC067747.1-201ENST00000608026 250 ntBASIC2.52□□□□□ -2.01
RFC1P35251 RMST_6.1-201ENST00000611980 203 ntBASIC2.52□□□□□ -2.01
RFC1P35251 AC083806.3-201ENST00000614016 455 ntBASIC2.52□□□□□ -2.01
RFC1P35251 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.52□□□□□ -2.01
RFC1P35251 SCARNA15.3-201ENST00000626315 122 ntBASIC2.52□□□□□ -2.01
RFC1P35251 SCARNA4.1-201ENST00000628597 123 ntBASIC2.52□□□□□ -2.01
RFC1P35251 MIR4272-201ENST00000635924 64 ntBASIC2.52□□□□□ -2.01
RFC1P35251 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.52□□□□□ -2.01
RFC1P35251 AL136360.1-201ENST00000503377 1900 ntBASIC2.52□□□□□ -2.01
RFC1P35251 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
RFC1P35251 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.51□□□□□ -2.01
RFC1P35251 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RFC1P35251 ZNF72P-201ENST00000425869 1908 ntBASIC2.51□□□□□ -2.01
RFC1P35251 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.51□□□□□ -2.01
RFC1P35251 snoU2_19.1-201ENST00000362361 80 ntBASIC2.51□□□□□ -2.01
RFC1P35251 Y_RNA.106-201ENST00000363189 100 ntBASIC2.51□□□□□ -2.01
RFC1P35251 RNU6-378P-201ENST00000384324 107 ntBASIC2.51□□□□□ -2.01
RFC1P35251 Y_RNA.645-201ENST00000391229 102 ntBASIC2.51□□□□□ -2.01
RFC1P35251 AC007098.1-201ENST00000420122 367 ntBASIC2.51□□□□□ -2.01
RFC1P35251 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.51□□□□□ -2.01
RFC1P35251 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.51□□□□□ -2.01
RFC1P35251 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.51□□□□□ -2.01
RFC1P35251 OR2AQ1P-201ENST00000451972 200 ntBASIC2.51□□□□□ -2.01
RFC1P35251 AC026436.1-201ENST00000510537 270 ntBASIC2.51□□□□□ -2.01
RFC1P35251 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.51□□□□□ -2.01
RFC1P35251 SNORA31.11-201ENST00000516528 139 ntBASIC2.51□□□□□ -2.01
RFC1P35251 RNU6-988P-201ENST00000519081 107 ntBASIC2.51□□□□□ -2.01
RFC1P35251 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RFC1P35251 AC027288.2-201ENST00000553028 243 ntBASIC2.51□□□□□ -2.01
RFC1P35251 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.51□□□□□ -2.01
RFC1P35251 MIR4672-201ENST00000583126 81 ntBASIC2.51□□□□□ -2.01
RFC1P35251 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.51□□□□□ -2.01
RFC1P35251 AL713866.2-201ENST00000603579 219 ntBASIC2.51□□□□□ -2.01
RFC1P35251 AC005520.5-201ENST00000613926 164 ntBASIC2.51□□□□□ -2.01
RFC1P35251 AC245884.12-201ENST00000615364 59 ntBASIC2.51□□□□□ -2.01
RFC1P35251 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.51□□□□□ -2.01
RFC1P35251 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.51□□□□□ -2.01
RFC1P35251 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.51□□□□□ -2.01
RFC1P35251 MIR1291-201ENST00000627649 87 ntBASIC2.51□□□□□ -2.01
RFC1P35251 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.51□□□□□ -2.01
RFC1P35251 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
RFC1P35251 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RFC1P35251 AC016717.2-201ENST00000609089 5141 ntBASIC2.51□□□□□ -2.01
RFC1P35251 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.5□□□□□ -2.01
RFC1P35251 RNU6-222P-201ENST00000362438 107 ntBASIC2.5□□□□□ -2.01
RFC1P35251 MIR625-201ENST00000385047 85 ntBASIC2.5□□□□□ -2.01
RFC1P35251 RNA5SP213-201ENST00000391031 106 ntBASIC2.5□□□□□ -2.01
RFC1P35251 RPS26P42-201ENST00000413485 326 ntBASIC2.5□□□□□ -2.01
RFC1P35251 AL118496.2-201ENST00000448300 230 ntBASIC2.5□□□□□ -2.01
RFC1P35251 AC090515.1-201ENST00000465295 476 ntBASIC2.5□□□□□ -2.01
RFC1P35251 AC140059.1-201ENST00000489238 361 ntBASIC2.5□□□□□ -2.01
RFC1P35251 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.5□□□□□ -2.01
RFC1P35251 HMGB3P3-201ENST00000510526 400 ntBASIC2.5□□□□□ -2.01
RFC1P35251 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.5□□□□□ -2.01
RFC1P35251 CYP4A27P-201ENST00000567218 190 ntBASIC2.5□□□□□ -2.01
RFC1P35251 AC046143.2-201ENST00000609789 160 ntBASIC2.5□□□□□ -2.01
RFC1P35251 AL137847.3-201ENST00000611521 109 ntBASIC2.5□□□□□ -2.01
RFC1P35251 PCGEM1.1-201ENST00000613431 131 ntBASIC2.5□□□□□ -2.01
RFC1P35251 AC243829.7-201ENST00000633081 225 ntBASIC2.5□□□□□ -2.01
RFC1P35251 AL606534.2-204ENST00000635008 178 ntBASIC2.5□□□□□ -2.01
RFC1P35251 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RFC1P35251 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
RFC1P35251 AC091812.1-201ENST00000432235 1948 ntBASIC2.49□□□□□ -2.01
RFC1P35251 SNORA63C-201ENST00000364578 129 ntBASIC2.49□□□□□ -2.01
RFC1P35251 RNU1-51P-201ENST00000365345 176 ntBASIC2.49□□□□□ -2.01
RFC1P35251 Y_RNA.358-201ENST00000365491 99 ntBASIC2.49□□□□□ -2.01
RFC1P35251 Y_RNA.364-201ENST00000365532 101 ntBASIC2.49□□□□□ -2.01
RFC1P35251 MIR144-201ENST00000384886 86 ntBASIC2.49□□□□□ -2.01
RFC1P35251 MIR153-2-201ENST00000385225 87 ntBASIC2.49□□□□□ -2.01
RFC1P35251 MIR549A-201ENST00000385268 96 ntBASIC2.49□□□□□ -2.01
RFC1P35251 MRPL42P3-201ENST00000401492 326 ntBASIC2.49□□□□□ -2.01
RFC1P35251 Y_RNA.592-201ENST00000410274 109 ntBASIC2.49□□□□□ -2.01
RFC1P35251 RNU2-63P-201ENST00000410792 194 ntBASIC2.49□□□□□ -2.01
RFC1P35251 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.49□□□□□ -2.01
RFC1P35251 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.49□□□□□ -2.01
RFC1P35251 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms