Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SLC6A4P31645 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SLC6A4P31645 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.95□□□□□ -1.94
SLC6A4P31645 RNU6-486P-201ENST00000363116 107 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 RNU6-873P-201ENST00000363833 107 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 Y_RNA.222-201ENST00000364264 102 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 SNORA51.4-201ENST00000364993 124 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 DYNLT3P1-201ENST00000378574 347 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 Y_RNA.396-201ENST00000383949 103 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 Y_RNA.462-201ENST00000384268 102 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 RNU6-472P-201ENST00000384299 107 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 Y_RNA.476-201ENST00000384347 108 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 Y_RNA.518-201ENST00000384552 113 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 SNORD115-46-201ENST00000390982 71 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 AL079342.1-201ENST00000401460 267 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 RNA5SP201-201ENST00000410316 124 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 RN7SKP58-201ENST00000411010 305 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 BMS1P22-201ENST00000414726 313 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 CBX3P6-201ENST00000430257 527 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.95□□□□□ -1.94
SLC6A4P31645 AC007395.1-201ENST00000451333 677 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 RPS29P12-201ENST00000460178 152 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC6A4P31645 RNU6-1271P-201ENST00000517049 105 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 AC107016.2-201ENST00000547968 190 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 AC079600.2-201ENST00000550076 130 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 UBL5P4-201ENST00000562584 236 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SLC6A4P31645 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC6A4P31645 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC6A4P31645 AC010999.1-201ENST00000611856 324 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 PCGEM1.1-201ENST00000613431 131 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.95□□□□□ -1.94
SLC6A4P31645 AC093831.2-201ENST00000624393 3427 ntBASIC2.95□□□□□ -1.94
SLC6A4P31645 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SLC6A4P31645 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SLC6A4P31645 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
SLC6A4P31645 MIR449A-201ENST00000362113 91 ntBASIC2.94□□□□□ -1.94
SLC6A4P31645 Y_RNA.376-201ENST00000365638 108 ntBASIC2.94□□□□□ -1.94
SLC6A4P31645 RNU6-1145P-201ENST00000384246 107 ntBASIC2.94□□□□□ -1.94
SLC6A4P31645 SNORD63-201ENST00000384262 68 ntBASIC2.94□□□□□ -1.94
SLC6A4P31645 Y_RNA.489-201ENST00000384410 101 ntBASIC2.94□□□□□ -1.94
SLC6A4P31645 MIR329-1-201ENST00000385028 80 ntBASIC2.94□□□□□ -1.94
SLC6A4P31645 RNU6-847P-201ENST00000411115 108 ntBASIC2.94□□□□□ -1.94
SLC6A4P31645 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.94□□□□□ -1.94
SLC6A4P31645 TRBVB-201ENST00000477100 408 ntBASIC2.94□□□□□ -1.94
SLC6A4P31645 RAC1P5-201ENST00000512182 576 ntBASIC2.94□□□□□ -1.94
SLC6A4P31645 RNA5SP367-201ENST00000516557 118 ntBASIC2.94□□□□□ -1.94
SLC6A4P31645 EIF4A1P12-201ENST00000551910 141 ntBASIC2.94□□□□□ -1.94
SLC6A4P31645 AC103810.1-201ENST00000579873 453 ntBASIC2.94□□□□□ -1.94
SLC6A4P31645 MIR4506-201ENST00000584693 77 ntBASIC2.94□□□□□ -1.94
SLC6A4P31645 AC013412.1-201ENST00000610687 192 ntBASIC2.94□□□□□ -1.94
SLC6A4P31645 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.94□□□□□ -1.94
SLC6A4P31645 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SLC6A4P31645 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
SLC6A4P31645 ZNF204P-201ENST00000416749 2397 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 AC069528.2-201ENST00000624849 1991 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 RNU1-62P-201ENST00000362599 164 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 RNA5SP361-201ENST00000362686 118 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 RNU1-35P-201ENST00000362782 153 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 U3.9-201ENST00000363823 204 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 RNU6-806P-201ENST00000365147 105 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 Y_RNA.595-201ENST00000410403 105 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 RNU6-1001P-201ENST00000411265 100 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.93□□□□□ -1.94
SLC6A4P31645 Z98742.2-201ENST00000431564 187 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 RPL23AP70-201ENST00000483361 460 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 SEM1P1-201ENST00000506694 209 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 AC074133.1-201ENST00000515696 183 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 SNORA31.6-201ENST00000516241 130 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 SNORA25.14-201ENST00000516481 132 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 Y_RNA.683-201ENST00000516508 93 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 GTF3AP2-201ENST00000557014 266 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 MIR4300-201ENST00000581016 96 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.93□□□□□ -1.94
SLC6A4P31645 ELOCP29-201ENST00000588193 334 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 AL670379.2-201ENST00000604983 252 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.93□□□□□ -1.94
SLC6A4P31645 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SLC6A4P31645 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.93□□□□□ -1.94
SLC6A4P31645 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.93□□□□□ -1.94
SLC6A4P31645 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.93□□□□□ -1.94
SLC6A4P31645 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
SLC6A4P31645 SNORD81.1-201ENST00000363064 77 ntBASIC2.92□□□□□ -1.94
SLC6A4P31645 Y_RNA.143-201ENST00000363520 106 ntBASIC2.92□□□□□ -1.94
SLC6A4P31645 Y_RNA.179-201ENST00000363844 90 ntBASIC2.92□□□□□ -1.94
SLC6A4P31645 MIR487A-201ENST00000385009 80 ntBASIC2.92□□□□□ -1.94
SLC6A4P31645 AL390729.2-201ENST00000416137 156 ntBASIC2.92□□□□□ -1.94
SLC6A4P31645 EIF4EP4-201ENST00000424916 578 ntBASIC2.92□□□□□ -1.94
SLC6A4P31645 AC105272.1-201ENST00000438604 198 ntBASIC2.92□□□□□ -1.94
SLC6A4P31645 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.92□□□□□ -1.94
SLC6A4P31645 SNORD127-201ENST00000458892 86 ntBASIC2.92□□□□□ -1.94
SLC6A4P31645 RPS23P5-201ENST00000495419 428 ntBASIC2.92□□□□□ -1.94
SLC6A4P31645 RNA5SP385-201ENST00000515947 110 ntBASIC2.92□□□□□ -1.94
SLC6A4P31645 RNA5SP356-201ENST00000515972 94 ntBASIC2.92□□□□□ -1.94
SLC6A4P31645 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.92□□□□□ -1.94
SLC6A4P31645 MIR3945-201ENST00000581853 98 ntBASIC2.92□□□□□ -1.94
SLC6A4P31645 RPL17P51-201ENST00000605218 238 ntBASIC2.92□□□□□ -1.94
SLC6A4P31645 AC010329.5-201ENST00000623497 2174 ntBASIC2.92□□□□□ -1.94
SLC6A4P31645 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms