Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AL353621.2-201ENST00000605340 133 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 SNORD58B-201ENST00000607313 66 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 AC007742.2-201ENST00000618226 398 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 AL138825.1-201ENST00000618587 192 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 U2.1-201ENST00000618978 145 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.19□□□□□ -1.9
CNGA1P29973 ZNF204P-201ENST00000416749 2397 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CNGA1P29973 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CNGA1P29973 RNU6-245P-201ENST00000384020 107 ntBASIC3.18□□□□□ -1.9
CNGA1P29973 MIR549A-201ENST00000385268 96 ntBASIC3.18□□□□□ -1.9
CNGA1P29973 AC114482.1-201ENST00000418010 247 ntBASIC3.18□□□□□ -1.9
CNGA1P29973 AC096644.2-201ENST00000429278 159 ntBASIC3.18□□□□□ -1.9
CNGA1P29973 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.18□□□□□ -1.9
CNGA1P29973 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.18□□□□□ -1.9
CNGA1P29973 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.18□□□□□ -1.9
CNGA1P29973 SNORA25.10-201ENST00000515926 124 ntBASIC3.18□□□□□ -1.9
CNGA1P29973 GNAI2P1-201ENST00000541815 315 ntBASIC3.18□□□□□ -1.9
CNGA1P29973 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.18□□□□□ -1.9
CNGA1P29973 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.18□□□□□ -1.9
CNGA1P29973 VN1R91P-201ENST00000594377 169 ntBASIC3.18□□□□□ -1.9
CNGA1P29973 AL355297.2-201ENST00000604792 129 ntBASIC3.18□□□□□ -1.9
CNGA1P29973 RPL17P51-201ENST00000605218 238 ntBASIC3.18□□□□□ -1.9
CNGA1P29973 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.18□□□□□ -1.9
CNGA1P29973 Y_RNA.812-201ENST00000610788 101 ntBASIC3.18□□□□□ -1.9
CNGA1P29973 AC107871.2-201ENST00000612894 502 ntBASIC3.18□□□□□ -1.9
CNGA1P29973 Y_RNA.784-201ENST00000613803 101 ntBASIC3.18□□□□□ -1.9
CNGA1P29973 Y_RNA.787-201ENST00000616522 101 ntBASIC3.18□□□□□ -1.9
CNGA1P29973 Y_RNA.780-201ENST00000617336 101 ntBASIC3.18□□□□□ -1.9
CNGA1P29973 AC005562.2-201ENST00000618264 111 ntBASIC3.18□□□□□ -1.9
CNGA1P29973 Y_RNA.801-201ENST00000619005 101 ntBASIC3.18□□□□□ -1.9
CNGA1P29973 AC099654.10-201ENST00000640395 161 ntBASIC3.18□□□□□ -1.9
CNGA1P29973 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CNGA1P29973 RNU6-873P-201ENST00000363833 107 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 RNA5SP68-201ENST00000363885 119 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 RNU6-280P-201ENST00000364145 104 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 SNORA33.2-201ENST00000365413 134 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 SNORA70B-201ENST00000384210 135 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 RPL21P75-201ENST00000396599 483 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 RPL21P28-201ENST00000401418 483 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 MIR1294-201ENST00000408503 142 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 RNA5SP492-201ENST00000411330 114 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 WARS2P1-201ENST00000429678 537 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 AC010095.1-201ENST00000443543 144 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 RPL21P39-201ENST00000463605 483 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 AC087190.1-201ENST00000484462 480 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 AC107032.1-201ENST00000485945 480 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 AC132942.1-201ENST00000486753 483 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 AC093591.1-201ENST00000491435 481 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 RPL21P16-201ENST00000495531 483 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 AC109329.2-201ENST00000519658 482 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 CBX3P7-201ENST00000532876 502 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 SNRPGP20-201ENST00000604477 205 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 AL590808.1-201ENST00000618696 141 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 MIR6733-201ENST00000635723 61 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.17□□□□□ -1.9
CNGA1P29973 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CNGA1P29973 AC108206.1-201ENST00000570186 4159 ntBASIC3.17□□□□□ -1.9
CNGA1P29973 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CNGA1P29973 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.16□□□□□ -1.9
CNGA1P29973 AL355596.1-201ENST00000565399 3996 ntBASIC3.16□□□□□ -1.9
CNGA1P29973 AC027124.2-201ENST00000428249 105 ntBASIC3.16□□□□□ -1.9
CNGA1P29973 AL445305.1-201ENST00000432577 575 ntBASIC3.16□□□□□ -1.9
CNGA1P29973 AC112492.4-201ENST00000456549 352 ntBASIC3.16□□□□□ -1.9
CNGA1P29973 SNORA40.14-201ENST00000516543 86 ntBASIC3.16□□□□□ -1.9
CNGA1P29973 AC091144.1-201ENST00000519573 138 ntBASIC3.16□□□□□ -1.9
CNGA1P29973 HSPE1P20-201ENST00000538133 289 ntBASIC3.16□□□□□ -1.9
CNGA1P29973 ANP32BP3-201ENST00000559213 706 ntBASIC3.16□□□□□ -1.9
CNGA1P29973 AC006600.1-201ENST00000572529 153 ntBASIC3.16□□□□□ -1.9
CNGA1P29973 MIR5695-201ENST00000579717 85 ntBASIC3.16□□□□□ -1.9
CNGA1P29973 AC125232.2-201ENST00000592457 143 ntBASIC3.16□□□□□ -1.9
CNGA1P29973 AC022432.1-201ENST00000595739 310 ntBASIC3.16□□□□□ -1.9
CNGA1P29973 AC016925.2-201ENST00000605108 242 ntBASIC3.16□□□□□ -1.9
CNGA1P29973 MIR6817-201ENST00000615588 66 ntBASIC3.16□□□□□ -1.9
CNGA1P29973 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.16□□□□□ -1.9
CNGA1P29973 AC005592.1-201ENST00000566527 1640 ntBASIC3.15□□□□□ -1.9
CNGA1P29973 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CNGA1P29973 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CNGA1P29973 RNU1-35P-201ENST00000362782 153 ntBASIC3.15□□□□□ -1.91
CNGA1P29973 RNU1-76P-201ENST00000362903 159 ntBASIC3.15□□□□□ -1.91
CNGA1P29973 Y_RNA.80-201ENST00000362996 102 ntBASIC3.15□□□□□ -1.91
CNGA1P29973 AC117470.1-201ENST00000381974 330 ntBASIC3.15□□□□□ -1.91
CNGA1P29973 SNORA18.2-201ENST00000383865 132 ntBASIC3.15□□□□□ -1.91
CNGA1P29973 RNU6-26P-201ENST00000383985 107 ntBASIC3.15□□□□□ -1.91
CNGA1P29973 RNU6-546P-201ENST00000383991 107 ntBASIC3.15□□□□□ -1.91
CNGA1P29973 RNU6-281P-201ENST00000384212 103 ntBASIC3.15□□□□□ -1.91
CNGA1P29973 MIR9-1-201ENST00000385198 89 ntBASIC3.15□□□□□ -1.91
CNGA1P29973 MIR628-201ENST00000385229 95 ntBASIC3.15□□□□□ -1.91
CNGA1P29973 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CNGA1P29973 MIR320B2-201ENST00000408479 138 ntBASIC3.15□□□□□ -1.91
CNGA1P29973 RNU2-32P-201ENST00000411193 191 ntBASIC3.15□□□□□ -1.91
CNGA1P29973 RNA5SP148-201ENST00000516527 94 ntBASIC3.15□□□□□ -1.91
CNGA1P29973 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.15□□□□□ -1.91
CNGA1P29973 AC022616.8-201ENST00000533569 253 ntBASIC3.15□□□□□ -1.91
CNGA1P29973 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CNGA1P29973 MIR5188-201ENST00000583467 113 ntBASIC3.15□□□□□ -1.91
CNGA1P29973 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CNGA1P29973 TCL6_2.1-201ENST00000615162 119 ntBASIC3.15□□□□□ -1.91
CNGA1P29973 U4atac.1-201ENST00000618345 95 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 225.2 ms