Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.04□□□□□ -2.24
HLA-DMAP28067 RN7SL429P-201ENST00000479090 223 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 RN7SL489P-201ENST00000486185 223 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 RN7SL327P-201ENST00000488659 223 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 RPL36AP21-201ENST00000490372 323 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 RPS23P5-201ENST00000495419 428 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 AC092436.3-201ENST00000511788 257 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 AC025465.4-201ENST00000513422 638 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 RNA5SP401-201ENST00000515920 127 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 RN7SKP298-201ENST00000515950 94 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 RNU6-1041P-201ENST00000516254 102 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 RNU6-1069P-201ENST00000516612 133 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 CENPUP1-201ENST00000526649 1202 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.04□□□□□ -2.24
HLA-DMAP28067 MIR5692C1-201ENST00000585309 91 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 RN7SKP299-201ENST00000606679 301 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 RN7SL853P-201ENST00000617250 223 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 AC103705.1-201ENST00000619013 241 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 AC139792.3-201ENST00000623525 224 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.03□□□□□ -2.24
HLA-DMAP28067 RNU4-66P-201ENST00000365199 138 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
HLA-DMAP28067 AL117342.1-201ENST00000404861 406 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 RNU4-55P-201ENST00000410731 137 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 C8orf59P1-201ENST00000429930 303 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.03□□□□□ -2.24
HLA-DMAP28067 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.03□□□□□ -2.24
HLA-DMAP28067 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.03□□□□□ -2.24
HLA-DMAP28067 HSPE1P9-201ENST00000440046 311 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 AC010095.1-201ENST00000443543 144 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 AC016717.1-201ENST00000448918 286 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 RNU6-1037P-201ENST00000459571 107 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 AC004223.1-201ENST00000479840 271 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 HMGB1P29-201ENST00000505659 499 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 AC010486.3-201ENST00000511602 785 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 AC010493.1-201ENST00000513479 292 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 RNU6-189P-201ENST00000516120 101 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 AC026407.1-201ENST00000518369 204 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 AC104383.1-201ENST00000530297 370 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.03□□□□□ -2.24
HLA-DMAP28067 AC084364.2-201ENST00000546924 395 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.03□□□□□ -2.24
HLA-DMAP28067 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.03□□□□□ -2.24
HLA-DMAP28067 AC010620.1-201ENST00000601088 1102 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 HSPE1P19-201ENST00000603327 295 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 AC092747.3-201ENST00000603769 301 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 AC016727.2-201ENST00000603988 621 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 AC025811.1-201ENST00000604312 472 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.03□□□□□ -2.24
HLA-DMAP28067 AC017083.3-201ENST00000609955 700 ntBASIC1.03□□□□□ -2.24
HLA-DMAP28067 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.03□□□□□ -2.24
HLA-DMAP28067 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.03□□□□□ -2.24
HLA-DMAP28067 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.02□□□□□ -2.25
HLA-DMAP28067 RNU6-227P-201ENST00000362865 103 ntBASIC1.02□□□□□ -2.25
HLA-DMAP28067 RNU5B-2P-201ENST00000363036 113 ntBASIC1.02□□□□□ -2.25
HLA-DMAP28067 SNORA33-201ENST00000363664 130 ntBASIC1.02□□□□□ -2.25
HLA-DMAP28067 RNU6-1329P-201ENST00000365664 107 ntBASIC1.02□□□□□ -2.25
HLA-DMAP28067 SNORA69-201ENST00000383895 132 ntBASIC1.02□□□□□ -2.25
HLA-DMAP28067 RNY3P9-201ENST00000384727 106 ntBASIC1.02□□□□□ -2.25
HLA-DMAP28067 Y_RNA.582-201ENST00000391023 95 ntBASIC1.02□□□□□ -2.25
HLA-DMAP28067 EIF1P1-201ENST00000421436 341 ntBASIC1.02□□□□□ -2.25
HLA-DMAP28067 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.02□□□□□ -2.25
HLA-DMAP28067 USP9YP14-201ENST00000430663 563 ntBASIC1.02□□□□□ -2.25
HLA-DMAP28067 USP9YP28-201ENST00000435142 589 ntBASIC1.02□□□□□ -2.25
HLA-DMAP28067 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.02□□□□□ -2.25
HLA-DMAP28067 MTND3P16-201ENST00000452205 344 ntBASIC1.02□□□□□ -2.25
HLA-DMAP28067 RNA5SP384-201ENST00000516615 116 ntBASIC1.02□□□□□ -2.25
HLA-DMAP28067 RNU1-92P-201ENST00000517017 135 ntBASIC1.02□□□□□ -2.25
HLA-DMAP28067 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.02□□□□□ -2.25
HLA-DMAP28067 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
HLA-DMAP28067 MIR3941-201ENST00000582572 103 ntBASIC1.02□□□□□ -2.25
HLA-DMAP28067 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
HLA-DMAP28067 MIR3976-201ENST00000606807 139 ntBASIC1.02□□□□□ -2.25
HLA-DMAP28067 AC064807.4-201ENST00000607201 407 ntBASIC1.02□□□□□ -2.25
HLA-DMAP28067 AL357078.3-201ENST00000607528 618 ntBASIC1.02□□□□□ -2.25
HLA-DMAP28067 AC126177.8-201ENST00000618339 1015 ntBASIC1.02□□□□□ -2.25
HLA-DMAP28067 ZNF209P-201ENST00000593450 2304 ntBASIC1.01□□□□□ -2.25
HLA-DMAP28067 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
HLA-DMAP28067 Y_RNA.77-201ENST00000362962 107 ntBASIC1.01□□□□□ -2.25
HLA-DMAP28067 Y_RNA.123-201ENST00000363338 102 ntBASIC1.01□□□□□ -2.25
HLA-DMAP28067 SNORA40.6-201ENST00000391153 128 ntBASIC1.01□□□□□ -2.25
HLA-DMAP28067 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
HLA-DMAP28067 MIR450B-201ENST00000401182 78 ntBASIC1.01□□□□□ -2.25
HLA-DMAP28067 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.01□□□□□ -2.25
HLA-DMAP28067 TIMM9P3-201ENST00000428659 274 ntBASIC1.01□□□□□ -2.25
HLA-DMAP28067 AL121890.1-201ENST00000435457 205 ntBASIC1.01□□□□□ -2.25
HLA-DMAP28067 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.01□□□□□ -2.25
HLA-DMAP28067 ATP5J2P3-201ENST00000451550 258 ntBASIC1.01□□□□□ -2.25
HLA-DMAP28067 AC079140.5-201ENST00000507882 310 ntBASIC1.01□□□□□ -2.25
HLA-DMAP28067 SNORD60.2-201ENST00000516883 86 ntBASIC1.01□□□□□ -2.25
HLA-DMAP28067 SUMO2P18-201ENST00000518873 252 ntBASIC1.01□□□□□ -2.25
HLA-DMAP28067 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.01□□□□□ -2.25
HLA-DMAP28067 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.01□□□□□ -2.25
HLA-DMAP28067 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.01□□□□□ -2.25
HLA-DMAP28067 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.01□□□□□ -2.25
HLA-DMAP28067 AL157687.1-201ENST00000554853 619 ntBASIC1.01□□□□□ -2.25
HLA-DMAP28067 DNAJC19P9-201ENST00000555084 351 ntBASIC1.01□□□□□ -2.25
HLA-DMAP28067 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.01□□□□□ -2.25
HLA-DMAP28067 HMGB1P33-201ENST00000563485 527 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms