Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNU6-111P-201ENST00000517179 105 ntBASIC2.97□□□□□ -1.93
CD40P25942 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.97□□□□□ -1.93
CD40P25942 AC026333.2-201ENST00000542164 106 ntBASIC2.97□□□□□ -1.93
CD40P25942 AL590240.4-201ENST00000616908 390 ntBASIC2.97□□□□□ -1.93
CD40P25942 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CD40P25942 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.97□□□□□ -1.93
CD40P25942 AC092593.1-201ENST00000515413 1815 ntBASIC2.97□□□□□ -1.93
CD40P25942 MAPK10-362ENST00000641864 4484 ntBASIC2.97□□□□□ -1.93
CD40P25942 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CD40P25942 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
CD40P25942 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.93
CD40P25942 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CD40P25942 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.96□□□□□ -1.94
CD40P25942 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CD40P25942 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
CD40P25942 MIR410-201ENST00000362222 80 ntBASIC2.96□□□□□ -1.94
CD40P25942 Y_RNA.277-201ENST00000364754 102 ntBASIC2.96□□□□□ -1.94
CD40P25942 SNORA51.4-201ENST00000364993 124 ntBASIC2.96□□□□□ -1.94
CD40P25942 RNU6-1026P-201ENST00000384465 108 ntBASIC2.96□□□□□ -1.94
CD40P25942 RNU6-220P-201ENST00000390919 107 ntBASIC2.96□□□□□ -1.94
CD40P25942 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.96□□□□□ -1.94
CD40P25942 AL357552.1-201ENST00000445254 415 ntBASIC2.96□□□□□ -1.94
CD40P25942 CYP2C59P-201ENST00000457790 269 ntBASIC2.96□□□□□ -1.94
CD40P25942 ATP5EP1-201ENST00000510257 156 ntBASIC2.96□□□□□ -1.94
CD40P25942 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.96□□□□□ -1.94
CD40P25942 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.96□□□□□ -1.94
CD40P25942 AC018630.3-201ENST00000542637 96 ntBASIC2.96□□□□□ -1.94
CD40P25942 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.96□□□□□ -1.94
CD40P25942 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.96□□□□□ -1.94
CD40P25942 AL161756.2-201ENST00000604597 246 ntBASIC2.96□□□□□ -1.94
CD40P25942 U2.14-201ENST00000615943 113 ntBASIC2.96□□□□□ -1.94
CD40P25942 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.96□□□□□ -1.94
CD40P25942 SNORA50A-202ENST00000629536 136 ntBASIC2.96□□□□□ -1.94
CD40P25942 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
CD40P25942 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
CD40P25942 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.96□□□□□ -1.94
CD40P25942 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
CD40P25942 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CD40P25942 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CD40P25942 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CD40P25942 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.95□□□□□ -1.94
CD40P25942 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CD40P25942 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CD40P25942 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CD40P25942 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CD40P25942 SNORA25.1-201ENST00000362326 128 ntBASIC2.95□□□□□ -1.94
CD40P25942 U3.8-201ENST00000363675 217 ntBASIC2.95□□□□□ -1.94
CD40P25942 RNU6-454P-201ENST00000364292 107 ntBASIC2.95□□□□□ -1.94
CD40P25942 MIR586-201ENST00000385035 97 ntBASIC2.95□□□□□ -1.94
CD40P25942 MIR548B-201ENST00000385247 97 ntBASIC2.95□□□□□ -1.94
CD40P25942 RNU2-54P-201ENST00000410299 190 ntBASIC2.95□□□□□ -1.94
CD40P25942 RNA5SP120-201ENST00000410900 112 ntBASIC2.95□□□□□ -1.94
CD40P25942 RNU2-32P-201ENST00000411193 191 ntBASIC2.95□□□□□ -1.94
CD40P25942 RNU6-1199P-201ENST00000411249 104 ntBASIC2.95□□□□□ -1.94
CD40P25942 AC009963.1-201ENST00000417265 157 ntBASIC2.95□□□□□ -1.94
CD40P25942 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.95□□□□□ -1.94
CD40P25942 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.95□□□□□ -1.94
CD40P25942 AC005326.1-201ENST00000429197 123 ntBASIC2.95□□□□□ -1.94
CD40P25942 RPL23AP83-201ENST00000434984 473 ntBASIC2.95□□□□□ -1.94
CD40P25942 AL139109.1-201ENST00000455491 297 ntBASIC2.95□□□□□ -1.94
CD40P25942 RN7SL330P-201ENST00000469709 307 ntBASIC2.95□□□□□ -1.94
CD40P25942 RN7SL807P-201ENST00000470923 297 ntBASIC2.95□□□□□ -1.94
CD40P25942 HMGN2P9-201ENST00000476875 229 ntBASIC2.95□□□□□ -1.94
CD40P25942 SNORA70.24-201ENST00000517233 118 ntBASIC2.95□□□□□ -1.94
CD40P25942 AC109329.2-201ENST00000519658 482 ntBASIC2.95□□□□□ -1.94
CD40P25942 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.95□□□□□ -1.94
CD40P25942 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CD40P25942 MIR5195-201ENST00000583555 115 ntBASIC2.95□□□□□ -1.94
CD40P25942 AC006380.1-201ENST00000603598 186 ntBASIC2.95□□□□□ -1.94
CD40P25942 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CD40P25942 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.95□□□□□ -1.94
CD40P25942 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
CD40P25942 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.95□□□□□ -1.94
CD40P25942 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CD40P25942 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CD40P25942 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CD40P25942 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CD40P25942 RNU1-23P-201ENST00000363361 144 ntBASIC2.94□□□□□ -1.94
CD40P25942 RNU6-546P-201ENST00000383991 107 ntBASIC2.94□□□□□ -1.94
CD40P25942 Y_RNA.418-201ENST00000384029 102 ntBASIC2.94□□□□□ -1.94
CD40P25942 RNU6-514P-201ENST00000384208 107 ntBASIC2.94□□□□□ -1.94
CD40P25942 Y_RNA.539-201ENST00000384635 107 ntBASIC2.94□□□□□ -1.94
CD40P25942 TOMM22P2-201ENST00000430735 237 ntBASIC2.94□□□□□ -1.94
CD40P25942 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.94□□□□□ -1.94
CD40P25942 BX510359.1-201ENST00000456973 237 ntBASIC2.94□□□□□ -1.94
CD40P25942 SNORA70.19-201ENST00000516717 90 ntBASIC2.94□□□□□ -1.94
CD40P25942 MIR3117-201ENST00000584034 78 ntBASIC2.94□□□□□ -1.94
CD40P25942 MIR4276-201ENST00000584832 70 ntBASIC2.94□□□□□ -1.94
CD40P25942 AC141273.2-201ENST00000618989 130 ntBASIC2.94□□□□□ -1.94
CD40P25942 AC022149.2-201ENST00000621061 203 ntBASIC2.94□□□□□ -1.94
CD40P25942 MIR1248-201ENST00000629190 106 ntBASIC2.94□□□□□ -1.94
CD40P25942 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CD40P25942 Z83843.1-201ENST00000604070 3685 ntBASIC2.94□□□□□ -1.94
CD40P25942 TNPO1P3-201ENST00000436471 2662 ntBASIC2.94□□□□□ -1.94
CD40P25942 AL356274.2-201ENST00000624379 3752 ntBASIC2.94□□□□□ -1.94
CD40P25942 Z82209.1-201ENST00000422141 2135 ntBASIC2.93□□□□□ -1.94
CD40P25942 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
CD40P25942 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.93□□□□□ -1.94
CD40P25942 Y_RNA.44-201ENST00000362676 108 ntBASIC2.93□□□□□ -1.94
CD40P25942 Y_RNA.65-201ENST00000362846 100 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms