Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 Y_RNA.708-201ENST00000516950 96 ntBASIC2.1□□□□□ -2.07
CDH3P22223 AC010928.2-201ENST00000588017 287 ntBASIC2.1□□□□□ -2.07
CDH3P22223 AC113139.1-201ENST00000605049 239 ntBASIC2.1□□□□□ -2.07
CDH3P22223 LARP7P1-201ENST00000605576 316 ntBASIC2.1□□□□□ -2.07
CDH3P22223 Y_RNA.804-201ENST00000615262 101 ntBASIC2.1□□□□□ -2.07
CDH3P22223 SCARNA4-201ENST00000629045 128 ntBASIC2.1□□□□□ -2.07
CDH3P22223 MIR1302-1-201ENST00000637932 143 ntBASIC2.1□□□□□ -2.07
CDH3P22223 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDH3P22223 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
CDH3P22223 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CDH3P22223 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CDH3P22223 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.1□□□□□ -2.07
CDH3P22223 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
CDH3P22223 Y_RNA.48-201ENST00000362710 103 ntBASIC2.09□□□□□ -2.07
CDH3P22223 SNORA25B-201ENST00000365507 128 ntBASIC2.09□□□□□ -2.07
CDH3P22223 MIR208B-201ENST00000401172 77 ntBASIC2.09□□□□□ -2.07
CDH3P22223 RNU6-370P-201ENST00000411008 104 ntBASIC2.09□□□□□ -2.07
CDH3P22223 RNU2-32P-201ENST00000411193 191 ntBASIC2.09□□□□□ -2.07
CDH3P22223 EDDM3CP-201ENST00000415977 425 ntBASIC2.09□□□□□ -2.07
CDH3P22223 AL590556.1-201ENST00000423231 483 ntBASIC2.09□□□□□ -2.07
CDH3P22223 MRPS17P9-201ENST00000511924 393 ntBASIC2.09□□□□□ -2.07
CDH3P22223 SCARNA16.3-201ENST00000516595 184 ntBASIC2.09□□□□□ -2.07
CDH3P22223 RNU6-965P-201ENST00000516721 96 ntBASIC2.09□□□□□ -2.07
CDH3P22223 RNU6-1213P-201ENST00000517075 94 ntBASIC2.09□□□□□ -2.07
CDH3P22223 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.09□□□□□ -2.07
CDH3P22223 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.09□□□□□ -2.07
CDH3P22223 CBX3P8-201ENST00000532412 525 ntBASIC2.09□□□□□ -2.07
CDH3P22223 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.09□□□□□ -2.07
CDH3P22223 MIR4273-201ENST00000582824 84 ntBASIC2.09□□□□□ -2.07
CDH3P22223 AC005034.5-201ENST00000604219 466 ntBASIC2.09□□□□□ -2.07
CDH3P22223 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
CDH3P22223 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CDH3P22223 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.08□□□□□ -2.08
CDH3P22223 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
CDH3P22223 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.08□□□□□ -2.08
CDH3P22223 RNU6-546P-201ENST00000383991 107 ntBASIC2.08□□□□□ -2.08
CDH3P22223 MIR487A-201ENST00000385009 80 ntBASIC2.08□□□□□ -2.08
CDH3P22223 MIR561-201ENST00000385216 97 ntBASIC2.08□□□□□ -2.08
CDH3P22223 SNORA75.4-201ENST00000391278 119 ntBASIC2.08□□□□□ -2.08
CDH3P22223 RPS26P42-201ENST00000413485 326 ntBASIC2.08□□□□□ -2.08
CDH3P22223 CBX3P6-201ENST00000430257 527 ntBASIC2.08□□□□□ -2.08
CDH3P22223 AC093019.1-201ENST00000443135 252 ntBASIC2.08□□□□□ -2.08
CDH3P22223 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.08□□□□□ -2.08
CDH3P22223 YWHAEP4-201ENST00000505390 198 ntBASIC2.08□□□□□ -2.08
CDH3P22223 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.08□□□□□ -2.08
CDH3P22223 RNA5SP384-201ENST00000516615 116 ntBASIC2.08□□□□□ -2.08
CDH3P22223 RNA5SP137-201ENST00000516833 135 ntBASIC2.08□□□□□ -2.08
CDH3P22223 AC022616.8-201ENST00000533569 253 ntBASIC2.08□□□□□ -2.08
CDH3P22223 APOOP3-201ENST00000536787 586 ntBASIC2.08□□□□□ -2.08
CDH3P22223 EIF4A1P12-201ENST00000551910 141 ntBASIC2.08□□□□□ -2.08
CDH3P22223 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.08□□□□□ -2.08
CDH3P22223 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.08□□□□□ -2.08
CDH3P22223 AL669831.3-213ENST00000636676 183 ntBASIC2.08□□□□□ -2.08
CDH3P22223 AC112487.2-201ENST00000637950 304 ntBASIC2.08□□□□□ -2.08
CDH3P22223 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.08□□□□□ -2.08
CDH3P22223 ZNF299P-201ENST00000406845 1804 ntBASIC2.07□□□□□ -2.08
CDH3P22223 Y_RNA.2-201ENST00000362330 96 ntBASIC2.07□□□□□ -2.08
CDH3P22223 RNU6-1188P-201ENST00000363795 107 ntBASIC2.07□□□□□ -2.08
CDH3P22223 U3.9-201ENST00000363823 204 ntBASIC2.07□□□□□ -2.08
CDH3P22223 RNU6-595P-201ENST00000363944 107 ntBASIC2.07□□□□□ -2.08
CDH3P22223 U8.10-201ENST00000384260 133 ntBASIC2.07□□□□□ -2.08
CDH3P22223 SNORA64-201ENST00000384674 134 ntBASIC2.07□□□□□ -2.08
CDH3P22223 SNORA48.3-201ENST00000391081 134 ntBASIC2.07□□□□□ -2.08
CDH3P22223 RNU6-1304P-201ENST00000411374 106 ntBASIC2.07□□□□□ -2.08
CDH3P22223 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.07□□□□□ -2.08
CDH3P22223 AC009238.1-201ENST00000442165 424 ntBASIC2.07□□□□□ -2.08
CDH3P22223 AC009237.6-201ENST00000446969 424 ntBASIC2.07□□□□□ -2.08
CDH3P22223 OR2AQ1P-201ENST00000451972 200 ntBASIC2.07□□□□□ -2.08
CDH3P22223 RPL30P10-201ENST00000488148 337 ntBASIC2.07□□□□□ -2.08
CDH3P22223 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.07□□□□□ -2.08
CDH3P22223 MIR449C-201ENST00000516047 92 ntBASIC2.07□□□□□ -2.08
CDH3P22223 RNU6-559P-201ENST00000516151 98 ntBASIC2.07□□□□□ -2.08
CDH3P22223 IGKV3-31-201ENST00000523109 329 ntBASIC2.07□□□□□ -2.08
CDH3P22223 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.07□□□□□ -2.08
CDH3P22223 AC093027.1-201ENST00000546698 429 ntBASIC2.07□□□□□ -2.08
CDH3P22223 ANP32BP3-201ENST00000559213 706 ntBASIC2.07□□□□□ -2.08
CDH3P22223 FRG2DP-202ENST00000566967 323 ntBASIC2.07□□□□□ -2.08
CDH3P22223 AL355375.2-201ENST00000574825 175 ntBASIC2.07□□□□□ -2.08
CDH3P22223 AC005014.2-201ENST00000607795 599 ntBASIC2.07□□□□□ -2.08
CDH3P22223 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.07□□□□□ -2.08
CDH3P22223 AL132822.1-201ENST00000617063 513 ntBASIC2.07□□□□□ -2.08
CDH3P22223 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.07□□□□□ -2.08
CDH3P22223 AL008636.1-201ENST00000625038 1018 ntBASIC2.07□□□□□ -2.08
CDH3P22223 MIR1248-201ENST00000629190 106 ntBASIC2.07□□□□□ -2.08
CDH3P22223 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CDH3P22223 RNU6-1159P-201ENST00000362933 107 ntBASIC2.06□□□□□ -2.08
CDH3P22223 RNU4-9P-201ENST00000364951 139 ntBASIC2.06□□□□□ -2.08
CDH3P22223 RNU6-867P-201ENST00000364956 107 ntBASIC2.06□□□□□ -2.08
CDH3P22223 Y_RNA.356-201ENST00000365475 113 ntBASIC2.06□□□□□ -2.08
CDH3P22223 RNU6-331P-201ENST00000384724 107 ntBASIC2.06□□□□□ -2.08
CDH3P22223 RNU6-1093P-201ENST00000391194 107 ntBASIC2.06□□□□□ -2.08
CDH3P22223 USMG5P1-201ENST00000425964 177 ntBASIC2.06□□□□□ -2.08
CDH3P22223 AL121890.1-201ENST00000435457 205 ntBASIC2.06□□□□□ -2.08
CDH3P22223 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.06□□□□□ -2.08
CDH3P22223 AL353689.1-201ENST00000438895 199 ntBASIC2.06□□□□□ -2.08
CDH3P22223 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.06□□□□□ -2.08
CDH3P22223 RNU1-40P-201ENST00000516816 164 ntBASIC2.06□□□□□ -2.08
CDH3P22223 RNU1-97P-201ENST00000516872 164 ntBASIC2.06□□□□□ -2.08
CDH3P22223 RNU6-667P-201ENST00000517186 102 ntBASIC2.06□□□□□ -2.08
CDH3P22223 HSPE1P18-201ENST00000517602 280 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms