Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC092001.1-201ENST00000453012 261 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.3□□□□□ -2.2
COL5A1P20908 RNA5SP233-201ENST00000459153 113 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 AC011005.2-201ENST00000487324 359 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 AC139453.3-201ENST00000493276 369 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 RNU6-581P-201ENST00000516214 105 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 RNA5SP165-201ENST00000517142 115 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
COL5A1P20908 AP000763.2-201ENST00000540641 163 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 AL121821.2-201ENST00000556081 394 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 AC007229.1-201ENST00000590455 412 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 AC044792.1-201ENST00000593294 196 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 AP000654.2-201ENST00000605633 586 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 Z69720.2-201ENST00000624755 279 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 AC008669.1-201ENST00000565823 2178 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
COL5A1P20908 Y_RNA.263-201ENST00000364659 114 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 RNU6-715P-201ENST00000365204 103 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 MIR320A-201ENST00000385302 82 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 RNU6-1156P-201ENST00000410365 100 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 AL139396.1-201ENST00000421137 167 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 PGBD4P6-201ENST00000421501 610 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 RPS15AP10-201ENST00000432472 382 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 RPS3AP52-201ENST00000435639 297 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 AC098831.1-201ENST00000440661 216 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 AL359672.1-201ENST00000442302 409 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.29□□□□□ -2.2
COL5A1P20908 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.29□□□□□ -2.2
COL5A1P20908 RPL26P9-201ENST00000457466 433 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 RNU6-1037P-201ENST00000459571 107 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 RPS27P21-201ENST00000486977 252 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 Y_RNA.701-201ENST00000516812 110 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 SNORA31.23-201ENST00000517219 133 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 RNU6-323P-201ENST00000521915 107 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 MIR548AC-201ENST00000585049 88 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 CYP2C61P-201ENST00000604072 290 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 AC064836.2-201ENST00000609491 462 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 RNU6-858P-201ENST00000362436 107 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 RNU6-428P-201ENST00000362942 107 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 Y_RNA.135-201ENST00000363439 95 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 Y_RNA.212-201ENST00000364177 102 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 SNORA68.1-201ENST00000364537 132 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
COL5A1P20908 RNU6-622P-201ENST00000384272 103 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 RNU6-601P-201ENST00000384540 107 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 BTF3L4P2-201ENST00000392798 346 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 SNORD56-201ENST00000413522 71 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.29□□□□□ -2.2
COL5A1P20908 OSTCP8-201ENST00000445117 448 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.29□□□□□ -2.2
COL5A1P20908 Y_RNA.653-201ENST00000459091 95 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 MTND4P17-201ENST00000470444 350 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 AC087343.1-201ENST00000477341 475 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.29□□□□□ -2.2
COL5A1P20908 Y_RNA.687-201ENST00000516558 91 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 RNA5SP454-201ENST00000517231 127 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 AC109329.1-201ENST00000518744 317 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 AC090821.2-201ENST00000523552 176 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 AC007151.1-201ENST00000572774 483 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 MIR5571-201ENST00000577998 113 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 RN7SL793P-201ENST00000583259 296 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 VN1R107P-201ENST00000601784 209 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 FAM157A-202ENST00000615155 405 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 AC133104.2-201ENST00000615272 193 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 HMGB1P24-202ENST00000615653 685 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.29□□□□□ -2.2
COL5A1P20908 RNU6-1252P-201ENST00000363054 104 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 RNU6-884P-201ENST00000363889 107 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 Y_RNA.259-201ENST00000364619 101 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 Y_RNA.404-201ENST00000383978 102 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 RNU6-198P-201ENST00000384258 104 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 RNU6-72P-201ENST00000384285 79 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 RNU6-45P-201ENST00000384471 107 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 RNU6-541P-201ENST00000384709 110 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 SNORA75.4-201ENST00000391278 119 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 RNU4-14P-201ENST00000410858 122 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.28□□□□□ -2.2
COL5A1P20908 UBE2V1P4-201ENST00000425374 344 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.28□□□□□ -2.2
COL5A1P20908 FABP5P14-201ENST00000437273 393 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 AC243964.1-201ENST00000441814 261 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.28□□□□□ -2.2
COL5A1P20908 AC107399.1-201ENST00000451226 265 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 CECR9-201ENST00000453421 199 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.28□□□□□ -2.2
COL5A1P20908 MTCYBP40-201ENST00000509390 1135 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 SMURF2P1-201ENST00000514992 481 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 RNU5B-3P-201ENST00000516601 115 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 RNU6-1183P-201ENST00000517054 60 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.28□□□□□ -2.2
COL5A1P20908 MIR5696-201ENST00000578474 85 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 MIR4795-201ENST00000584182 89 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
COL5A1P20908 AL160413.1-201ENST00000622780 310 ntBASIC1.28□□□□□ -2.2
COL5A1P20908 RNU6-105P-201ENST00000363909 104 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 Y_RNA.393-201ENST00000383936 102 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 RNY1P4-201ENST00000384595 115 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 RNU6-748P-201ENST00000384648 107 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 SNORA46.1-201ENST00000391069 153 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms