Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.27□□□□□ -1.89
COL6A2P12110 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.27□□□□□ -1.89
COL6A2P12110 RPS27P26-201ENST00000494583 239 ntBASIC3.27□□□□□ -1.89
COL6A2P12110 SNORA27.4-201ENST00000516650 95 ntBASIC3.27□□□□□ -1.89
COL6A2P12110 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.27□□□□□ -1.89
COL6A2P12110 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.27□□□□□ -1.89
COL6A2P12110 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.27□□□□□ -1.89
COL6A2P12110 AC107294.3-201ENST00000609211 526 ntBASIC3.27□□□□□ -1.89
COL6A2P12110 AC012314.7-201ENST00000619693 93 ntBASIC3.27□□□□□ -1.89
COL6A2P12110 AC018692.3-201ENST00000623929 123 ntBASIC3.27□□□□□ -1.89
COL6A2P12110 IGHVIII-44-202ENST00000636235 289 ntBASIC3.27□□□□□ -1.89
COL6A2P12110 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL6A2P12110 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.27□□□□□ -1.89
COL6A2P12110 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
COL6A2P12110 AC069528.2-201ENST00000624849 1991 ntBASIC3.27□□□□□ -1.89
COL6A2P12110 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL6A2P12110 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL6A2P12110 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
COL6A2P12110 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.26□□□□□ -1.89
COL6A2P12110 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.26□□□□□ -1.89
COL6A2P12110 SNORA25.1-201ENST00000362326 128 ntBASIC3.26□□□□□ -1.89
COL6A2P12110 Y_RNA.83-201ENST00000363005 113 ntBASIC3.26□□□□□ -1.89
COL6A2P12110 Y_RNA.122-201ENST00000363331 96 ntBASIC3.26□□□□□ -1.89
COL6A2P12110 RNU6-1062P-201ENST00000383908 107 ntBASIC3.26□□□□□ -1.89
COL6A2P12110 SNORA46.1-201ENST00000391069 153 ntBASIC3.26□□□□□ -1.89
COL6A2P12110 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.26□□□□□ -1.89
COL6A2P12110 AL353705.1-201ENST00000433468 480 ntBASIC3.26□□□□□ -1.89
COL6A2P12110 POLR2KP2-201ENST00000438155 177 ntBASIC3.26□□□□□ -1.89
COL6A2P12110 AC115115.1-201ENST00000449927 248 ntBASIC3.26□□□□□ -1.89
COL6A2P12110 AC145146.1-201ENST00000496370 254 ntBASIC3.26□□□□□ -1.89
COL6A2P12110 AC104619.4-201ENST00000510773 249 ntBASIC3.26□□□□□ -1.89
COL6A2P12110 RNA5SP385-201ENST00000515947 110 ntBASIC3.26□□□□□ -1.89
COL6A2P12110 AC027176.1-201ENST00000560204 514 ntBASIC3.26□□□□□ -1.89
COL6A2P12110 AC004467.1-201ENST00000615678 330 ntBASIC3.26□□□□□ -1.89
COL6A2P12110 AC005562.2-201ENST00000618264 111 ntBASIC3.26□□□□□ -1.89
COL6A2P12110 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL6A2P12110 AL359854.1-201ENST00000614203 1594 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.25□□□□□ -1.89
COL6A2P12110 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL6A2P12110 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.25□□□□□ -1.89
COL6A2P12110 AC008264.2-201ENST00000610193 3731 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 Y_RNA.82-201ENST00000363000 102 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 Y_RNA.92-201ENST00000363043 102 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 Y_RNA.101-201ENST00000363154 102 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 Y_RNA.199-201ENST00000364014 102 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 Y_RNA.235-201ENST00000364412 102 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 Y_RNA.306-201ENST00000365015 102 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 SNORA72.2-201ENST00000365028 127 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 Y_RNA.312-201ENST00000365089 102 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 Y_RNA.322-201ENST00000365151 102 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 RNY4P28-201ENST00000365281 93 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 RNA5SP354-201ENST00000391247 136 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 RNA5SP229-201ENST00000410809 99 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 RNU6-1199P-201ENST00000411249 104 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.25□□□□□ -1.89
COL6A2P12110 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.25□□□□□ -1.89
COL6A2P12110 PRELID3BP1-201ENST00000457142 540 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 Y_RNA.650-201ENST00000459002 102 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 RPS29P12-201ENST00000460178 152 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 AC091959.1-201ENST00000495857 238 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.25□□□□□ -1.89
COL6A2P12110 Y_RNA.777-201ENST00000516982 102 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.25□□□□□ -1.89
COL6A2P12110 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.25□□□□□ -1.89
COL6A2P12110 Y_RNA.771-201ENST00000598668 102 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 RPL17P51-201ENST00000605218 238 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 Y_RNA.789-201ENST00000622480 102 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 MIR3674-201ENST00000636576 68 ntBASIC3.25□□□□□ -1.89
COL6A2P12110 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.25□□□□□ -1.89
COL6A2P12110 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL6A2P12110 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
COL6A2P12110 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL6A2P12110 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
COL6A2P12110 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COL6A2P12110 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
COL6A2P12110 AC092435.3-201ENST00000565538 3654 ntBASIC3.24□□□□□ -1.89
COL6A2P12110 RNU4-35P-201ENST00000362588 141 ntBASIC3.24□□□□□ -1.89
COL6A2P12110 RNU1-70P-201ENST00000362618 164 ntBASIC3.24□□□□□ -1.89
COL6A2P12110 RNA5SP119-201ENST00000362715 117 ntBASIC3.24□□□□□ -1.89
COL6A2P12110 Y_RNA.180-201ENST00000363867 113 ntBASIC3.24□□□□□ -1.89
COL6A2P12110 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.24□□□□□ -1.89
COL6A2P12110 RNU6-514P-201ENST00000384208 107 ntBASIC3.24□□□□□ -1.89
COL6A2P12110 SNORA9-201ENST00000384215 133 ntBASIC3.24□□□□□ -1.89
COL6A2P12110 EIF4EP4-201ENST00000424916 578 ntBASIC3.24□□□□□ -1.89
COL6A2P12110 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.24□□□□□ -1.89
COL6A2P12110 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.24□□□□□ -1.89
COL6A2P12110 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.24□□□□□ -1.89
COL6A2P12110 Y_RNA.644-201ENST00000459006 113 ntBASIC3.24□□□□□ -1.89
COL6A2P12110 AC025518.1-201ENST00000479856 347 ntBASIC3.24□□□□□ -1.89
COL6A2P12110 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.24□□□□□ -1.89
COL6A2P12110 Y_RNA.674-201ENST00000516362 113 ntBASIC3.24□□□□□ -1.89
COL6A2P12110 AC026403.1-201ENST00000518938 295 ntBASIC3.24□□□□□ -1.89
COL6A2P12110 AC245166.1-201ENST00000521012 253 ntBASIC3.24□□□□□ -1.89
COL6A2P12110 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.24□□□□□ -1.89
COL6A2P12110 CBX3P4-201ENST00000538909 354 ntBASIC3.24□□□□□ -1.89
COL6A2P12110 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.24□□□□□ -1.89
COL6A2P12110 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.24□□□□□ -1.89
COL6A2P12110 MIR3922-201ENST00000585192 84 ntBASIC3.24□□□□□ -1.89
COL6A2P12110 AL365434.2-201ENST00000607979 234 ntBASIC3.24□□□□□ -1.89
COL6A2P12110 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms