Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC090049.2-201ENST00000550377 109 ntBASIC-1.61□□□□□ -2.67
TOP2AP11388 MIR3136-201ENST00000583498 78 ntBASIC-1.61□□□□□ -2.67
TOP2AP11388 AL442067.1-201ENST00000613261 223 ntBASIC-1.61□□□□□ -2.67
TOP2AP11388 AC007014.2-201ENST00000615581 479 ntBASIC-1.61□□□□□ -2.67
TOP2AP11388 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.62□□□□□ -2.67
TOP2AP11388 RNU6-40P-201ENST00000384254 107 ntBASIC-1.62□□□□□ -2.67
TOP2AP11388 DEFB130D-201ENST00000426866 237 ntBASIC-1.62□□□□□ -2.67
TOP2AP11388 AC092170.1-201ENST00000440211 356 ntBASIC-1.62□□□□□ -2.67
TOP2AP11388 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-1.62□□□□□ -2.67
TOP2AP11388 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC-1.62□□□□□ -2.67
TOP2AP11388 SNORD114-19-201ENST00000363072 75 ntBASIC-1.63□□□□□ -2.67
TOP2AP11388 RNU6-57P-201ENST00000411348 103 ntBASIC-1.63□□□□□ -2.67
TOP2AP11388 AL663109.1-201ENST00000411498 844 ntBASIC-1.63□□□□□ -2.67
TOP2AP11388 ARL5AP1-201ENST00000418991 388 ntBASIC-1.63□□□□□ -2.67
TOP2AP11388 RPS15AP10-201ENST00000432472 382 ntBASIC-1.63□□□□□ -2.67
TOP2AP11388 MTCYBP15-201ENST00000433123 1127 ntBASIC-1.63□□□□□ -2.67
TOP2AP11388 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-1.63□□□□□ -2.67
TOP2AP11388 AP002004.2-201ENST00000531656 154 ntBASIC-1.63□□□□□ -2.67
TOP2AP11388 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-1.63□□□□□ -2.67
TOP2AP11388 SNORA36.1-201ENST00000363424 132 ntBASIC-1.64□□□□□ -2.67
TOP2AP11388 RNU6-1141P-201ENST00000364520 107 ntBASIC-1.64□□□□□ -2.67
TOP2AP11388 Y_RNA.567-201ENST00000384736 106 ntBASIC-1.64□□□□□ -2.67
TOP2AP11388 AL451046.2-201ENST00000403074 277 ntBASIC-1.64□□□□□ -2.67
TOP2AP11388 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-1.64□□□□□ -2.67
TOP2AP11388 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.64□□□□□ -2.67
TOP2AP11388 U4.2-201ENST00000618561 85 ntBASIC-1.64□□□□□ -2.67
TOP2AP11388 MIR6514-201ENST00000622549 70 ntBASIC-1.64□□□□□ -2.67
TOP2AP11388 AC019226.1-201ENST00000625666 515 ntBASIC-1.64□□□□□ -2.67
TOP2AP11388 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.65□□□□□ -2.67
TOP2AP11388 U8.5-201ENST00000364528 136 ntBASIC-1.65□□□□□ -2.67
TOP2AP11388 RNU6-116P-201ENST00000384042 109 ntBASIC-1.65□□□□□ -2.67
TOP2AP11388 RNU6-441P-201ENST00000384545 106 ntBASIC-1.65□□□□□ -2.67
TOP2AP11388 AL357139.1-201ENST00000407792 426 ntBASIC-1.65□□□□□ -2.67
TOP2AP11388 RPL21P38-201ENST00000418090 167 ntBASIC-1.65□□□□□ -2.67
TOP2AP11388 AC023632.1-201ENST00000518463 375 ntBASIC-1.65□□□□□ -2.67
TOP2AP11388 MIR4742-201ENST00000581069 85 ntBASIC-1.65□□□□□ -2.67
TOP2AP11388 AC234772.3-201ENST00000602277 528 ntBASIC-1.65□□□□□ -2.67
TOP2AP11388 AC034229.4-201ENST00000607861 441 ntBASIC-1.65□□□□□ -2.67
TOP2AP11388 AC239868.4-201ENST00000608318 671 ntBASIC-1.65□□□□□ -2.67
TOP2AP11388 SNORD113.3-201ENST00000364630 78 ntBASIC-1.66□□□□□ -2.67
TOP2AP11388 Y_RNA.332-201ENST00000365271 113 ntBASIC-1.66□□□□□ -2.67
TOP2AP11388 RNU6-187P-201ENST00000384139 106 ntBASIC-1.66□□□□□ -2.67
TOP2AP11388 SNORD51-201ENST00000384320 80 ntBASIC-1.66□□□□□ -2.67
TOP2AP11388 AL121978.1-201ENST00000402778 359 ntBASIC-1.66□□□□□ -2.67
TOP2AP11388 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-1.66□□□□□ -2.67
TOP2AP11388 AC092809.3-201ENST00000415453 231 ntBASIC-1.66□□□□□ -2.67
TOP2AP11388 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-1.66□□□□□ -2.67
TOP2AP11388 MTND1P30-201ENST00000441241 901 ntBASIC-1.66□□□□□ -2.67
TOP2AP11388 AC007327.1-201ENST00000447461 264 ntBASIC-1.66□□□□□ -2.67
TOP2AP11388 AC079354.2-201ENST00000453523 154 ntBASIC-1.66□□□□□ -2.67
TOP2AP11388 AC100830.2-201ENST00000581636 240 ntBASIC-1.66□□□□□ -2.67
TOP2AP11388 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-1.66□□□□□ -2.67
TOP2AP11388 AC125232.2-201ENST00000592457 143 ntBASIC-1.66□□□□□ -2.67
TOP2AP11388 uc_338.19-201ENST00000616808 99 ntBASIC-1.66□□□□□ -2.67
TOP2AP11388 AC079416.3-201ENST00000624479 549 ntBASIC-1.66□□□□□ -2.67
TOP2AP11388 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.66□□□□□ -2.68
TOP2AP11388 MIR1298-201ENST00000408783 112 ntBASIC-1.66□□□□□ -2.68
TOP2AP11388 DNAJA1P2-201ENST00000421360 1197 ntBASIC-1.66□□□□□ -2.68
TOP2AP11388 RNU6-881P-201ENST00000516813 102 ntBASIC-1.66□□□□□ -2.68
TOP2AP11388 RNU2-46P-201ENST00000517038 113 ntBASIC-1.66□□□□□ -2.68
TOP2AP11388 DEFB131D-201ENST00000526803 184 ntBASIC-1.66□□□□□ -2.68
TOP2AP11388 DEFB131C-201ENST00000528817 165 ntBASIC-1.66□□□□□ -2.68
TOP2AP11388 MIR4499-201ENST00000584834 69 ntBASIC-1.66□□□□□ -2.68
TOP2AP11388 FER-210ENST00000628534 558 ntTSL 5 BASIC-1.66□□□□□ -2.68
TOP2AP11388 MTND4P9-201ENST00000507819 1346 ntBASIC-1.67□□□□□ -2.68
TOP2AP11388 MIR101-2-201ENST00000362195 79 ntBASIC-1.67□□□□□ -2.68
TOP2AP11388 SNORD114-25-201ENST00000363742 72 ntBASIC-1.67□□□□□ -2.68
TOP2AP11388 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-1.67□□□□□ -2.68
TOP2AP11388 MIR1207-201ENST00000408249 87 ntBASIC-1.67□□□□□ -2.68
TOP2AP11388 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-1.67□□□□□ -2.68
TOP2AP11388 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.67□□□□□ -2.68
TOP2AP11388 AC093019.1-201ENST00000443135 252 ntBASIC-1.67□□□□□ -2.68
TOP2AP11388 CR383656.7-201ENST00000548164 174 ntBASIC-1.67□□□□□ -2.68
TOP2AP11388 MIR548AD-201ENST00000584780 82 ntBASIC-1.67□□□□□ -2.68
TOP2AP11388 RNU4-76P-201ENST00000364509 141 ntBASIC-1.68□□□□□ -2.68
TOP2AP11388 SNORD82-201ENST00000365530 70 ntBASIC-1.68□□□□□ -2.68
TOP2AP11388 MIR873-201ENST00000401120 77 ntBASIC-1.68□□□□□ -2.68
TOP2AP11388 RNU2-47P-201ENST00000410649 186 ntBASIC-1.68□□□□□ -2.68
TOP2AP11388 USP9YP21-201ENST00000420603 432 ntBASIC-1.68□□□□□ -2.68
TOP2AP11388 RNU6-390P-201ENST00000516259 103 ntBASIC-1.68□□□□□ -2.68
TOP2AP11388 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-1.68□□□□□ -2.68
TOP2AP11388 MIR4306-201ENST00000583390 91 ntBASIC-1.68□□□□□ -2.68
TOP2AP11388 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.69□□□□□ -2.68
TOP2AP11388 AL133264.1-201ENST00000407157 562 ntBASIC-1.69□□□□□ -2.68
TOP2AP11388 OFD1P3Y-201ENST00000453312 783 ntBASIC-1.69□□□□□ -2.68
TOP2AP11388 MTND2P33-201ENST00000506452 1031 ntBASIC-1.69□□□□□ -2.68
TOP2AP11388 RNU6-488P-201ENST00000515918 99 ntBASIC-1.69□□□□□ -2.68
TOP2AP11388 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.69□□□□□ -2.68
TOP2AP11388 MIR6828-201ENST00000636181 60 ntBASIC-1.69□□□□□ -2.68
TOP2AP11388 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-1.69□□□□□ -2.68
TOP2AP11388 SNORD115-2-201ENST00000362842 82 ntBASIC-1.7□□□□□ -2.68
TOP2AP11388 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.7□□□□□ -2.68
TOP2AP11388 AL590135.1-201ENST00000422215 156 ntBASIC-1.7□□□□□ -2.68
TOP2AP11388 AL355994.1-201ENST00000424379 260 ntBASIC-1.7□□□□□ -2.68
TOP2AP11388 AC019205.3-201ENST00000424573 156 ntBASIC-1.7□□□□□ -2.68
TOP2AP11388 AC016700.2-201ENST00000446011 156 ntBASIC-1.7□□□□□ -2.68
TOP2AP11388 AC015911.1-201ENST00000495111 156 ntBASIC-1.7□□□□□ -2.68
TOP2AP11388 AC021146.6-201ENST00000514659 117 ntBASIC-1.7□□□□□ -2.68
TOP2AP11388 RNA5SP180-201ENST00000516181 101 ntBASIC-1.7□□□□□ -2.68
TOP2AP11388 OR8K2P-201ENST00000524645 927 ntBASIC-1.7□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms