Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL136221.1-201ENST00000621449 509 ntBASIC1.71□□□□□ -2.14
TOP1P11387 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.71□□□□□ -2.14
TOP1P11387 AC097372.5-201ENST00000623665 376 ntBASIC1.71□□□□□ -2.14
TOP1P11387 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.71□□□□□ -2.14
TOP1P11387 AP000648.3-201ENST00000623539 4507 ntBASIC1.71□□□□□ -2.14
TOP1P11387 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.7□□□□□ -2.14
TOP1P11387 Y_RNA.40-201ENST00000362645 93 ntBASIC1.7□□□□□ -2.14
TOP1P11387 SNORA48.1-201ENST00000390879 135 ntBASIC1.7□□□□□ -2.14
TOP1P11387 BTF3L4P2-201ENST00000392798 346 ntBASIC1.7□□□□□ -2.14
TOP1P11387 Y_RNA.595-201ENST00000410403 105 ntBASIC1.7□□□□□ -2.14
TOP1P11387 CBX3P6-201ENST00000430257 527 ntBASIC1.7□□□□□ -2.14
TOP1P11387 AC243964.1-201ENST00000441814 261 ntBASIC1.7□□□□□ -2.14
TOP1P11387 AC007547.1-201ENST00000462177 490 ntBASIC1.7□□□□□ -2.14
TOP1P11387 AC079140.5-201ENST00000507882 310 ntBASIC1.7□□□□□ -2.14
TOP1P11387 RNU6-377P-201ENST00000515965 102 ntBASIC1.7□□□□□ -2.14
TOP1P11387 SNORA19.2-201ENST00000516013 114 ntBASIC1.7□□□□□ -2.14
TOP1P11387 RNU6-970P-201ENST00000516312 107 ntBASIC1.7□□□□□ -2.14
TOP1P11387 Y_RNA.675-201ENST00000516389 149 ntBASIC1.7□□□□□ -2.14
TOP1P11387 AC069113.1-201ENST00000517763 267 ntBASIC1.7□□□□□ -2.14
TOP1P11387 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.7□□□□□ -2.14
TOP1P11387 AC087854.1-201ENST00000519706 414 ntBASIC1.7□□□□□ -2.14
TOP1P11387 AC025423.5-201ENST00000550230 219 ntBASIC1.7□□□□□ -2.14
TOP1P11387 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.7□□□□□ -2.14
TOP1P11387 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.7□□□□□ -2.14
TOP1P11387 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TOP1P11387 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.7□□□□□ -2.14
TOP1P11387 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.7□□□□□ -2.14
TOP1P11387 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.7□□□□□ -2.14
TOP1P11387 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
TOP1P11387 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.7□□□□□ -2.14
TOP1P11387 ZNF209P-201ENST00000593450 2304 ntBASIC1.69□□□□□ -2.14
TOP1P11387 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.69□□□□□ -2.14
TOP1P11387 SNORD56.1-201ENST00000362913 68 ntBASIC1.69□□□□□ -2.14
TOP1P11387 Y_RNA.100-201ENST00000363141 102 ntBASIC1.69□□□□□ -2.14
TOP1P11387 Y_RNA.135-201ENST00000363439 95 ntBASIC1.69□□□□□ -2.14
TOP1P11387 Y_RNA.301-201ENST00000364990 103 ntBASIC1.69□□□□□ -2.14
TOP1P11387 RNU6-1329P-201ENST00000365664 107 ntBASIC1.69□□□□□ -2.14
TOP1P11387 RNU6-338P-201ENST00000383888 105 ntBASIC1.69□□□□□ -2.14
TOP1P11387 Y_RNA.414-201ENST00000384011 101 ntBASIC1.69□□□□□ -2.14
TOP1P11387 Y_RNA.530-201ENST00000384587 101 ntBASIC1.69□□□□□ -2.14
TOP1P11387 MT-TL1-201ENST00000386347 75 ntBASIC1.69□□□□□ -2.14
TOP1P11387 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
TOP1P11387 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.69□□□□□ -2.14
TOP1P11387 MTCO3P18-201ENST00000440206 761 ntBASIC1.69□□□□□ -2.14
TOP1P11387 AL359672.1-201ENST00000442302 409 ntBASIC1.69□□□□□ -2.14
TOP1P11387 AC018710.1-201ENST00000506509 158 ntBASIC1.69□□□□□ -2.14
TOP1P11387 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.69□□□□□ -2.14
TOP1P11387 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.69□□□□□ -2.14
TOP1P11387 AC096745.1-201ENST00000509945 370 ntBASIC1.69□□□□□ -2.14
TOP1P11387 RPL39P5-202ENST00000512505 151 ntBASIC1.69□□□□□ -2.14
TOP1P11387 AL117351.2-201ENST00000513571 157 ntBASIC1.69□□□□□ -2.14
TOP1P11387 RNU6-1088P-201ENST00000516850 104 ntBASIC1.69□□□□□ -2.14
TOP1P11387 AC109479.2-201ENST00000517842 174 ntBASIC1.69□□□□□ -2.14
TOP1P11387 AL161670.1-201ENST00000554348 137 ntBASIC1.69□□□□□ -2.14
TOP1P11387 AC100830.2-201ENST00000581636 240 ntBASIC1.69□□□□□ -2.14
TOP1P11387 AL138726.1-201ENST00000614873 333 ntBASIC1.69□□□□□ -2.14
TOP1P11387 AL159153.1-201ENST00000619688 317 ntBASIC1.69□□□□□ -2.14
TOP1P11387 CASC19-280ENST00000642102 1351 ntBASIC1.69□□□□□ -2.14
TOP1P11387 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
TOP1P11387 SNORD113-7-201ENST00000363762 77 ntBASIC1.68□□□□□ -2.14
TOP1P11387 Y_RNA.279-201ENST00000364763 95 ntBASIC1.68□□□□□ -2.14
TOP1P11387 RNU6-692P-201ENST00000384496 107 ntBASIC1.68□□□□□ -2.14
TOP1P11387 AL356776.1-201ENST00000406574 447 ntBASIC1.68□□□□□ -2.14
TOP1P11387 AC138393.2-201ENST00000414742 246 ntBASIC1.68□□□□□ -2.14
TOP1P11387 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.68□□□□□ -2.14
TOP1P11387 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.68□□□□□ -2.14
TOP1P11387 MTCO2P3-201ENST00000442543 421 ntBASIC1.68□□□□□ -2.14
TOP1P11387 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.68□□□□□ -2.14
TOP1P11387 AL031274.1-201ENST00000450334 232 ntBASIC1.68□□□□□ -2.14
TOP1P11387 MTND1P11-201ENST00000456661 876 ntBASIC1.68□□□□□ -2.14
TOP1P11387 AC116353.2-201ENST00000505332 712 ntBASIC1.68□□□□□ -2.14
TOP1P11387 RNU4-49P-201ENST00000516080 140 ntBASIC1.68□□□□□ -2.14
TOP1P11387 RNU6-864P-201ENST00000516256 108 ntBASIC1.68□□□□□ -2.14
TOP1P11387 RNU6-1332P-201ENST00000516666 104 ntBASIC1.68□□□□□ -2.14
TOP1P11387 RNU6-965P-201ENST00000516721 96 ntBASIC1.68□□□□□ -2.14
TOP1P11387 AC104576.1-201ENST00000524225 88 ntBASIC1.68□□□□□ -2.14
TOP1P11387 SUB1P3-201ENST00000564581 315 ntBASIC1.68□□□□□ -2.14
TOP1P11387 MIR4498-201ENST00000577599 66 ntBASIC1.68□□□□□ -2.14
TOP1P11387 snoU13.31-201ENST00000607291 104 ntBASIC1.68□□□□□ -2.14
TOP1P11387 AC009248.2-201ENST00000619826 254 ntBASIC1.68□□□□□ -2.14
TOP1P11387 AL133216.2-202ENST00000634512 349 ntBASIC1.68□□□□□ -2.14
TOP1P11387 AC233981.2-201ENST00000611524 1614 ntBASIC1.68□□□□□ -2.14
TOP1P11387 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
TOP1P11387 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.68□□□□□ -2.14
TOP1P11387 MIR424-201ENST00000362227 98 ntBASIC1.67□□□□□ -2.14
TOP1P11387 RNU6-212P-201ENST00000362642 104 ntBASIC1.67□□□□□ -2.14
TOP1P11387 U8.1-201ENST00000362843 134 ntBASIC1.67□□□□□ -2.14
TOP1P11387 Y_RNA.303-201ENST00000364998 94 ntBASIC1.67□□□□□ -2.14
TOP1P11387 RNA5SP100-201ENST00000410903 110 ntBASIC1.67□□□□□ -2.14
TOP1P11387 RNA5SP59-201ENST00000410922 110 ntBASIC1.67□□□□□ -2.14
TOP1P11387 RNU6-293P-201ENST00000411259 106 ntBASIC1.67□□□□□ -2.14
TOP1P11387 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.67□□□□□ -2.14
TOP1P11387 AL590632.1-201ENST00000424289 371 ntBASIC1.67□□□□□ -2.14
TOP1P11387 SNAP23P1-201ENST00000433229 246 ntBASIC1.67□□□□□ -2.14
TOP1P11387 AL353752.1-201ENST00000454946 260 ntBASIC1.67□□□□□ -2.14
TOP1P11387 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.67□□□□□ -2.14
TOP1P11387 RNU6-329P-201ENST00000459618 107 ntBASIC1.67□□□□□ -2.14
TOP1P11387 RPS29P27-201ENST00000463711 170 ntBASIC1.67□□□□□ -2.14
TOP1P11387 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.67□□□□□ -2.14
TOP1P11387 AC008628.2-201ENST00000502605 298 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms