Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SNORA18.2-201ENST00000383865 132 ntBASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 RNU6-1026P-201ENST00000384465 108 ntBASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 Y_RNA.533-201ENST00000384596 114 ntBASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 MIR32-201ENST00000384965 70 ntBASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 MIR518A2-201ENST00000384966 87 ntBASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 MIR1289-2-201ENST00000408360 111 ntBASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 AC138393.2-201ENST00000414742 246 ntBASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 AC098614.3-201ENST00000438957 440 ntBASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 ATP5EP1-201ENST00000510257 156 ntBASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 SNORA20.3-201ENST00000516880 132 ntBASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 ANP32BP3-201ENST00000559213 706 ntBASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 AC078899.2-201ENST00000595282 212 ntBASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 AC018462.2-201ENST00000605375 395 ntBASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 AC022306.2-201ENST00000617563 647 ntBASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 AC005562.2-201ENST00000618264 111 ntBASIC2.03□□□□□ -2.08
RAB40ALP0C0E4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 Y_RNA.339-201ENST00000365325 102 ntBASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 Y_RNA.390-201ENST00000383932 102 ntBASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 RNU6-842P-201ENST00000384269 107 ntBASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 MIR549A-201ENST00000385268 96 ntBASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 AL355497.1-201ENST00000406262 551 ntBASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 PDCL2P1-201ENST00000419302 352 ntBASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 Z82188.1-201ENST00000436709 154 ntBASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 AL035666.1-201ENST00000446195 348 ntBASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 AC055731.1-201ENST00000474387 401 ntBASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 AC090255.1-201ENST00000495779 349 ntBASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 AC116353.2-201ENST00000505332 712 ntBASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 RNU2-19P-201ENST00000517288 84 ntBASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 MIR5696-201ENST00000578474 85 ntBASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 MIR4801-201ENST00000582704 82 ntBASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 AC010928.2-201ENST00000588017 287 ntBASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 AL359314.1-201ENST00000616913 261 ntBASIC2.02□□□□□ -2.09
RAB40ALP0C0E4 ZNF299P-201ENST00000406845 1804 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 SNORD115-32-201ENST00000364079 82 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 SNORD81.2-201ENST00000365153 76 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 U8.10-201ENST00000384260 133 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 Y_RNA.473-201ENST00000384333 102 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 SNORA67.3-201ENST00000384366 140 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 MIR320B2-201ENST00000408479 138 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 Y_RNA.594-201ENST00000410373 140 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 AC243428.1-201ENST00000421099 264 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 MTND3P10-201ENST00000450967 341 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 snoU13.30-201ENST00000458951 104 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 TOMM22P6-201ENST00000465035 409 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 AC026782.1-201ENST00000512952 449 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 RNU2-44P-201ENST00000516795 194 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 DEFB131C-201ENST00000528817 165 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 MIR5006-201ENST00000583027 110 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 AC011494.1-201ENST00000596454 237 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 MIR6840-201ENST00000611937 71 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 AC099654.5-201ENST00000636479 350 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 TPTEP1-208ENST00000636884 213 ntBASIC2.01□□□□□ -2.09
RAB40ALP0C0E4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2□□□□□ -2.09
RAB40ALP0C0E4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RAB40ALP0C0E4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2□□□□□ -2.09
RAB40ALP0C0E4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2□□□□□ -2.09
RAB40ALP0C0E4 Y_RNA.2-201ENST00000362330 96 ntBASIC2□□□□□ -2.09
RAB40ALP0C0E4 Y_RNA.88-201ENST00000363029 99 ntBASIC2□□□□□ -2.09
RAB40ALP0C0E4 RNU6-1164P-201ENST00000364428 107 ntBASIC2□□□□□ -2.09
RAB40ALP0C0E4 Y_RNA.332-201ENST00000365271 113 ntBASIC2□□□□□ -2.09
RAB40ALP0C0E4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2□□□□□ -2.09
RAB40ALP0C0E4 Y_RNA.482-201ENST00000384377 111 ntBASIC2□□□□□ -2.09
RAB40ALP0C0E4 RNU6-160P-201ENST00000384591 107 ntBASIC2□□□□□ -2.09
RAB40ALP0C0E4 MIR487A-201ENST00000385009 80 ntBASIC2□□□□□ -2.09
RAB40ALP0C0E4 MIR153-2-201ENST00000385225 87 ntBASIC2□□□□□ -2.09
RAB40ALP0C0E4 RNU6-1050P-201ENST00000410388 107 ntBASIC2□□□□□ -2.09
RAB40ALP0C0E4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2□□□□□ -2.09
RAB40ALP0C0E4 BX510359.4-201ENST00000423750 193 ntBASIC2□□□□□ -2.09
RAB40ALP0C0E4 WARS2P1-201ENST00000429678 537 ntBASIC2□□□□□ -2.09
RAB40ALP0C0E4 AL445646.1-201ENST00000431784 216 ntBASIC2□□□□□ -2.09
RAB40ALP0C0E4 AC004386.2-201ENST00000441858 148 ntBASIC2□□□□□ -2.09
RAB40ALP0C0E4 SNRPEP8-201ENST00000442866 260 ntBASIC2□□□□□ -2.09
RAB40ALP0C0E4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2□□□□□ -2.09
RAB40ALP0C0E4 AC007215.1-201ENST00000464893 276 ntBASIC2□□□□□ -2.09
RAB40ALP0C0E4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2□□□□□ -2.09
RAB40ALP0C0E4 HMGN1P12-201ENST00000499125 195 ntBASIC2□□□□□ -2.09
RAB40ALP0C0E4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2□□□□□ -2.09
RAB40ALP0C0E4 AC243960.4-201ENST00000600532 288 ntBASIC2□□□□□ -2.09
RAB40ALP0C0E4 SNRPGP20-201ENST00000604477 205 ntBASIC2□□□□□ -2.09
RAB40ALP0C0E4 RMST_6.1-201ENST00000611980 203 ntBASIC2□□□□□ -2.09
RAB40ALP0C0E4 TCL6_2.1-201ENST00000615162 119 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms