Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
SYPP08247 AF117829.1-206ENST00000621883 3802 ntBASIC3.46□□□□□ -1.86
SYPP08247 SNORD114-19-201ENST00000363072 75 ntBASIC3.46□□□□□ -1.86
SYPP08247 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.46□□□□□ -1.86
SYPP08247 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.46□□□□□ -1.86
SYPP08247 AL441985.1-201ENST00000457727 251 ntBASIC3.46□□□□□ -1.86
SYPP08247 U3.44-201ENST00000458938 192 ntBASIC3.46□□□□□ -1.86
SYPP08247 Y_RNA.637-201ENST00000459424 114 ntBASIC3.46□□□□□ -1.86
SYPP08247 RNU6-344P-201ENST00000516635 111 ntBASIC3.46□□□□□ -1.86
SYPP08247 DEFB131C-201ENST00000528817 165 ntBASIC3.46□□□□□ -1.86
SYPP08247 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.46□□□□□ -1.86
SYPP08247 AC005562.2-201ENST00000618264 111 ntBASIC3.46□□□□□ -1.86
SYPP08247 U7.8-201ENST00000619968 63 ntBASIC3.46□□□□□ -1.86
SYPP08247 AF127577.6-201ENST00000623352 2191 ntBASIC3.46□□□□□ -1.86
SYPP08247 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SYPP08247 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.46□□□□□ -1.86
SYPP08247 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SYPP08247 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SYPP08247 Z83843.1-201ENST00000604070 3685 ntBASIC3.45□□□□□ -1.86
SYPP08247 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.45□□□□□ -1.86
SYPP08247 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SYPP08247 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SYPP08247 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.45□□□□□ -1.86
SYPP08247 MIR147B-201ENST00000390185 80 ntBASIC3.45□□□□□ -1.86
SYPP08247 SNORA40.19-201ENST00000390846 128 ntBASIC3.45□□□□□ -1.86
SYPP08247 RNU6-750P-201ENST00000390946 107 ntBASIC3.45□□□□□ -1.86
SYPP08247 Y_RNA.580-201ENST00000391004 95 ntBASIC3.45□□□□□ -1.86
SYPP08247 U3.40-201ENST00000408706 208 ntBASIC3.45□□□□□ -1.86
SYPP08247 RN7SKP111-201ENST00000410349 271 ntBASIC3.45□□□□□ -1.86
SYPP08247 DBIP2-201ENST00000419076 262 ntBASIC3.45□□□□□ -1.86
SYPP08247 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.45□□□□□ -1.86
SYPP08247 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SYPP08247 TRBV12-2-201ENST00000489763 344 ntBASIC3.45□□□□□ -1.86
SYPP08247 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.45□□□□□ -1.86
SYPP08247 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SYPP08247 FCF1P8-201ENST00000510322 597 ntBASIC3.45□□□□□ -1.86
SYPP08247 RN7SKP209-201ENST00000516888 304 ntBASIC3.45□□□□□ -1.86
SYPP08247 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.45□□□□□ -1.86
SYPP08247 AL391813.1-201ENST00000603098 260 ntBASIC3.45□□□□□ -1.86
SYPP08247 AP001485.1-201ENST00000604799 199 ntBASIC3.45□□□□□ -1.86
SYPP08247 TCL6_2.1-201ENST00000615162 119 ntBASIC3.45□□□□□ -1.86
SYPP08247 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.45□□□□□ -1.86
SYPP08247 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SYPP08247 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SYPP08247 AL365361.1-201ENST00000566942 3481 ntBASIC3.45□□□□□ -1.86
SYPP08247 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
SYPP08247 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.44□□□□□ -1.86
SYPP08247 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SYPP08247 Y_RNA.272-201ENST00000364696 102 ntBASIC3.44□□□□□ -1.86
SYPP08247 RNU6-81P-201ENST00000365608 104 ntBASIC3.44□□□□□ -1.86
SYPP08247 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.44□□□□□ -1.86
SYPP08247 RNA5SP504-201ENST00000410676 117 ntBASIC3.44□□□□□ -1.86
SYPP08247 RNA5SP38-201ENST00000410750 119 ntBASIC3.44□□□□□ -1.86
SYPP08247 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.44□□□□□ -1.86
SYPP08247 AC027124.2-201ENST00000428249 105 ntBASIC3.44□□□□□ -1.86
SYPP08247 HMGN2P20-201ENST00000437531 273 ntBASIC3.44□□□□□ -1.86
SYPP08247 RPL23AP62-201ENST00000463396 453 ntBASIC3.44□□□□□ -1.86
SYPP08247 RPL31P41-201ENST00000477967 372 ntBASIC3.44□□□□□ -1.86
SYPP08247 RNU6-107P-201ENST00000516643 102 ntBASIC3.44□□□□□ -1.86
SYPP08247 AC009127.3-201ENST00000570531 403 ntBASIC3.44□□□□□ -1.86
SYPP08247 SNORD11B-201ENST00000607707 90 ntBASIC3.44□□□□□ -1.86
SYPP08247 AL162274.2-201ENST00000614406 332 ntBASIC3.44□□□□□ -1.86
SYPP08247 AC058791.1-201ENST00000608412 3198 ntBASIC3.44□□□□□ -1.86
SYPP08247 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.44□□□□□ -1.86
SYPP08247 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SYPP08247 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
SYPP08247 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SYPP08247 RNU1-75P-201ENST00000347264 129 ntBASIC3.43□□□□□ -1.86
SYPP08247 Y_RNA.7-201ENST00000362352 102 ntBASIC3.43□□□□□ -1.86
SYPP08247 U3.9-201ENST00000363823 204 ntBASIC3.43□□□□□ -1.86
SYPP08247 SNORD87-201ENST00000364849 89 ntBASIC3.43□□□□□ -1.86
SYPP08247 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.43□□□□□ -1.86
SYPP08247 BMS1P22-201ENST00000414726 313 ntBASIC3.43□□□□□ -1.86
SYPP08247 MTATP6P29-201ENST00000415057 132 ntBASIC3.43□□□□□ -1.86
SYPP08247 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.43□□□□□ -1.86
SYPP08247 AC004386.2-201ENST00000441858 148 ntBASIC3.43□□□□□ -1.86
SYPP08247 RPS3P1-201ENST00000456781 192 ntBASIC3.43□□□□□ -1.86
SYPP08247 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.43□□□□□ -1.86
SYPP08247 AC145146.1-201ENST00000496370 254 ntBASIC3.43□□□□□ -1.86
SYPP08247 PHBP14-201ENST00000512887 367 ntBASIC3.43□□□□□ -1.86
SYPP08247 RNU6-579P-201ENST00000516879 102 ntBASIC3.43□□□□□ -1.86
SYPP08247 IGKV2-26-201ENST00000518305 343 ntBASIC3.43□□□□□ -1.86
SYPP08247 AC027176.1-201ENST00000560204 514 ntBASIC3.43□□□□□ -1.86
SYPP08247 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.43□□□□□ -1.86
SYPP08247 AL713866.2-201ENST00000603579 219 ntBASIC3.43□□□□□ -1.86
SYPP08247 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.43□□□□□ -1.86
SYPP08247 MIR6852-201ENST00000621699 66 ntBASIC3.43□□□□□ -1.86
SYPP08247 AC068205.3-201ENST00000636385 468 ntBASIC3.43□□□□□ -1.86
SYPP08247 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SYPP08247 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
SYPP08247 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.43□□□□□ -1.86
SYPP08247 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.43□□□□□ -1.86
SYPP08247 AC000403.1-201ENST00000613696 3585 ntBASIC3.42□□□□□ -1.86
SYPP08247 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SYPP08247 Y_RNA.238-201ENST00000364441 102 ntBASIC3.42□□□□□ -1.86
SYPP08247 RNU6-1130P-201ENST00000365434 107 ntBASIC3.42□□□□□ -1.86
SYPP08247 RNU4-17P-201ENST00000365598 141 ntBASIC3.42□□□□□ -1.86
SYPP08247 MIR186-201ENST00000384988 86 ntBASIC3.42□□□□□ -1.86
SYPP08247 RNU6-763P-201ENST00000390865 106 ntBASIC3.42□□□□□ -1.86
SYPP08247 AL357075.1-201ENST00000404107 726 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms