Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 AC005000.2-201ENST00000605468 310 ntBASIC4.06□□□□□ -1.76
NEFMP07197 AL590240.4-201ENST00000616908 390 ntBASIC4.06□□□□□ -1.76
NEFMP07197 SNORA43.4-201ENST00000629559 138 ntBASIC4.06□□□□□ -1.76
NEFMP07197 IGHVIII-44-202ENST00000636235 289 ntBASIC4.06□□□□□ -1.76
NEFMP07197 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.06□□□□□ -1.76
NEFMP07197 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC4.06□□□□□ -1.76
NEFMP07197 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NEFMP07197 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NEFMP07197 RNU6-778P-201ENST00000363269 103 ntBASIC4.05□□□□□ -1.76
NEFMP07197 RNU1-73P-201ENST00000383971 164 ntBASIC4.05□□□□□ -1.76
NEFMP07197 RNU6-20P-201ENST00000384106 107 ntBASIC4.05□□□□□ -1.76
NEFMP07197 RNU6-1035P-201ENST00000384477 107 ntBASIC4.05□□□□□ -1.76
NEFMP07197 MIR128-1-201ENST00000384921 82 ntBASIC4.05□□□□□ -1.76
NEFMP07197 RNU6-1001P-201ENST00000411265 100 ntBASIC4.05□□□□□ -1.76
NEFMP07197 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.05□□□□□ -1.76
NEFMP07197 WARS2P1-201ENST00000429678 537 ntBASIC4.05□□□□□ -1.76
NEFMP07197 POLR2KP2-201ENST00000438155 177 ntBASIC4.05□□□□□ -1.76
NEFMP07197 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.05□□□□□ -1.76
NEFMP07197 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.05□□□□□ -1.76
NEFMP07197 AP001324.2-201ENST00000461163 319 ntBASIC4.05□□□□□ -1.76
NEFMP07197 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.05□□□□□ -1.76
NEFMP07197 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.05□□□□□ -1.76
NEFMP07197 SNORA27.4-201ENST00000516650 95 ntBASIC4.05□□□□□ -1.76
NEFMP07197 RNU6-58P-201ENST00000517143 103 ntBASIC4.05□□□□□ -1.76
NEFMP07197 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.05□□□□□ -1.76
NEFMP07197 AC008749.1-201ENST00000597650 306 ntBASIC4.05□□□□□ -1.76
NEFMP07197 AC073349.3-201ENST00000617616 186 ntBASIC4.05□□□□□ -1.76
NEFMP07197 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.05□□□□□ -1.76
NEFMP07197 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.05□□□□□ -1.76
NEFMP07197 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.05□□□□□ -1.76
NEFMP07197 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
NEFMP07197 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.04□□□□□ -1.76
NEFMP07197 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.04□□□□□ -1.76
NEFMP07197 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.04□□□□□ -1.76
NEFMP07197 RNU5F-3P-201ENST00000363767 117 ntBASIC4.04□□□□□ -1.76
NEFMP07197 SNORD115-8-201ENST00000363856 82 ntBASIC4.04□□□□□ -1.76
NEFMP07197 RNU6-704P-201ENST00000364162 103 ntBASIC4.04□□□□□ -1.76
NEFMP07197 SNORD115-38-201ENST00000365037 82 ntBASIC4.04□□□□□ -1.76
NEFMP07197 RNU6-1175P-201ENST00000365200 107 ntBASIC4.04□□□□□ -1.76
NEFMP07197 Y_RNA.435-201ENST00000384095 112 ntBASIC4.04□□□□□ -1.76
NEFMP07197 RNU6-1145P-201ENST00000384246 107 ntBASIC4.04□□□□□ -1.76
NEFMP07197 MIR329-1-201ENST00000385028 80 ntBASIC4.04□□□□□ -1.76
NEFMP07197 SNORA48.2-201ENST00000390926 124 ntBASIC4.04□□□□□ -1.76
NEFMP07197 RNA5SP274-201ENST00000410484 108 ntBASIC4.04□□□□□ -1.76
NEFMP07197 RN7SKP220-201ENST00000410611 288 ntBASIC4.04□□□□□ -1.76
NEFMP07197 Z92545.1-201ENST00000411782 234 ntBASIC4.04□□□□□ -1.76
NEFMP07197 RPL23AP36-201ENST00000413895 458 ntBASIC4.04□□□□□ -1.76
NEFMP07197 BMS1P22-201ENST00000414726 313 ntBASIC4.04□□□□□ -1.76
NEFMP07197 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.04□□□□□ -1.76
NEFMP07197 AC016632.1-201ENST00000503994 196 ntBASIC4.04□□□□□ -1.76
NEFMP07197 RNU6-56P-201ENST00000516986 93 ntBASIC4.04□□□□□ -1.76
NEFMP07197 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.04□□□□□ -1.76
NEFMP07197 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NEFMP07197 CR383656.8-201ENST00000549046 145 ntBASIC4.04□□□□□ -1.76
NEFMP07197 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.04□□□□□ -1.76
NEFMP07197 AC020895.1-201ENST00000595362 272 ntBASIC4.04□□□□□ -1.76
NEFMP07197 AC004832.4-201ENST00000608952 331 ntBASIC4.04□□□□□ -1.76
NEFMP07197 MIR6134-201ENST00000617606 109 ntBASIC4.04□□□□□ -1.76
NEFMP07197 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.04□□□□□ -1.76
NEFMP07197 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
NEFMP07197 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NEFMP07197 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC4.03□□□□□ -1.76
NEFMP07197 AL359854.1-201ENST00000614203 1594 ntBASIC4.03□□□□□ -1.76
NEFMP07197 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NEFMP07197 SNORD56.1-201ENST00000362913 68 ntBASIC4.03□□□□□ -1.76
NEFMP07197 SNORA51.4-201ENST00000364993 124 ntBASIC4.03□□□□□ -1.76
NEFMP07197 Y_RNA.304-201ENST00000365011 112 ntBASIC4.03□□□□□ -1.76
NEFMP07197 Y_RNA.418-201ENST00000384029 102 ntBASIC4.03□□□□□ -1.76
NEFMP07197 RNU6-1289P-201ENST00000384431 106 ntBASIC4.03□□□□□ -1.76
NEFMP07197 RNU6-918P-201ENST00000391219 106 ntBASIC4.03□□□□□ -1.76
NEFMP07197 RNU6-651P-201ENST00000411040 105 ntBASIC4.03□□□□□ -1.76
NEFMP07197 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.03□□□□□ -1.76
NEFMP07197 AL358075.3-201ENST00000426289 226 ntBASIC4.03□□□□□ -1.76
NEFMP07197 GPM6BP3-201ENST00000442797 145 ntBASIC4.03□□□□□ -1.76
NEFMP07197 SNORD2.1-201ENST00000458762 69 ntBASIC4.03□□□□□ -1.76
NEFMP07197 AP001025.1-201ENST00000486139 332 ntBASIC4.03□□□□□ -1.76
NEFMP07197 SNORA40.9-201ENST00000515895 93 ntBASIC4.03□□□□□ -1.76
NEFMP07197 RNU7-200P-201ENST00000516105 62 ntBASIC4.03□□□□□ -1.76
NEFMP07197 AP005660.1-201ENST00000522972 293 ntBASIC4.03□□□□□ -1.76
NEFMP07197 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.03□□□□□ -1.76
NEFMP07197 AC107016.2-201ENST00000547968 190 ntBASIC4.03□□□□□ -1.76
NEFMP07197 AL391261.3-201ENST00000557194 520 ntBASIC4.03□□□□□ -1.76
NEFMP07197 UBL5P4-201ENST00000562584 236 ntBASIC4.03□□□□□ -1.76
NEFMP07197 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.03□□□□□ -1.76
NEFMP07197 AC006001.4-201ENST00000622243 395 ntBASIC4.03□□□□□ -1.76
NEFMP07197 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.03□□□□□ -1.76
NEFMP07197 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NEFMP07197 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NEFMP07197 RNU6-1141P-201ENST00000364520 107 ntBASIC4.02□□□□□ -1.77
NEFMP07197 RNU1-100P-201ENST00000365255 165 ntBASIC4.02□□□□□ -1.77
NEFMP07197 Y_RNA.331-201ENST00000365267 102 ntBASIC4.02□□□□□ -1.77
NEFMP07197 Y_RNA.383-201ENST00000383855 97 ntBASIC4.02□□□□□ -1.77
NEFMP07197 RNU6-1027P-201ENST00000383998 107 ntBASIC4.02□□□□□ -1.77
NEFMP07197 Y_RNA.446-201ENST00000384178 104 ntBASIC4.02□□□□□ -1.77
NEFMP07197 RNU6-1081P-201ENST00000384537 107 ntBASIC4.02□□□□□ -1.77
NEFMP07197 MIR493-201ENST00000385254 89 ntBASIC4.02□□□□□ -1.77
NEFMP07197 RN7SKP61-201ENST00000410642 295 ntBASIC4.02□□□□□ -1.77
NEFMP07197 AC074117.2-201ENST00000417130 397 ntBASIC4.02□□□□□ -1.77
NEFMP07197 NDUFB4P6-201ENST00000436819 366 ntBASIC4.02□□□□□ -1.77
NEFMP07197 AC007969.2-201ENST00000441891 191 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms