Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MTND5P9-201ENST00000503854 1755 ntBASIC2.25□□□□□ -2.05
RB1P06400 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RB1P06400 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.24□□□□□ -2.05
RB1P06400 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RB1P06400 RNU6-1059P-201ENST00000363752 98 ntBASIC2.24□□□□□ -2.05
RB1P06400 Y_RNA.184-201ENST00000363884 108 ntBASIC2.24□□□□□ -2.05
RB1P06400 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RB1P06400 Y_RNA.390-201ENST00000383932 102 ntBASIC2.24□□□□□ -2.05
RB1P06400 HMGN2P39-201ENST00000398005 273 ntBASIC2.24□□□□□ -2.05
RB1P06400 MIR1262-201ENST00000408276 93 ntBASIC2.24□□□□□ -2.05
RB1P06400 RNU2-2P-201ENST00000410396 191 ntBASIC2.24□□□□□ -2.05
RB1P06400 RNU2-41P-201ENST00000410991 178 ntBASIC2.24□□□□□ -2.05
RB1P06400 CYCSP49-201ENST00000420810 319 ntBASIC2.24□□□□□ -2.05
RB1P06400 USP9YP30-201ENST00000430729 455 ntBASIC2.24□□□□□ -2.05
RB1P06400 RPS3AP52-201ENST00000435639 297 ntBASIC2.24□□□□□ -2.05
RB1P06400 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.24□□□□□ -2.05
RB1P06400 OR2AQ1P-201ENST00000451972 200 ntBASIC2.24□□□□□ -2.05
RB1P06400 SNORD5.1-201ENST00000458800 75 ntBASIC2.24□□□□□ -2.05
RB1P06400 RPL23AP75-201ENST00000491601 451 ntBASIC2.24□□□□□ -2.05
RB1P06400 AC093259.1-201ENST00000509755 300 ntBASIC2.24□□□□□ -2.05
RB1P06400 RNU6-1016P-201ENST00000516689 94 ntBASIC2.24□□□□□ -2.05
RB1P06400 RNA5SP490-201ENST00000517141 136 ntBASIC2.24□□□□□ -2.05
RB1P06400 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.24□□□□□ -2.05
RB1P06400 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.24□□□□□ -2.05
RB1P06400 AC007229.1-201ENST00000590455 412 ntBASIC2.24□□□□□ -2.05
RB1P06400 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.24□□□□□ -2.05
RB1P06400 U2.15-201ENST00000611544 191 ntBASIC2.24□□□□□ -2.05
RB1P06400 U2.16-201ENST00000613119 191 ntBASIC2.24□□□□□ -2.05
RB1P06400 U2.12-201ENST00000613778 191 ntBASIC2.24□□□□□ -2.05
RB1P06400 U2.20-201ENST00000613956 192 ntBASIC2.24□□□□□ -2.05
RB1P06400 U2.9-201ENST00000615427 191 ntBASIC2.24□□□□□ -2.05
RB1P06400 U2.11-201ENST00000616345 191 ntBASIC2.24□□□□□ -2.05
RB1P06400 U2.2-201ENST00000616535 191 ntBASIC2.24□□□□□ -2.05
RB1P06400 AC022306.2-201ENST00000617563 647 ntBASIC2.24□□□□□ -2.05
RB1P06400 U2.3-201ENST00000617785 191 ntBASIC2.24□□□□□ -2.05
RB1P06400 U2.19-201ENST00000618602 191 ntBASIC2.24□□□□□ -2.05
RB1P06400 RNU2-1-201ENST00000618664 191 ntBASIC2.24□□□□□ -2.05
RB1P06400 U2.6-201ENST00000619225 191 ntBASIC2.24□□□□□ -2.05
RB1P06400 U2.5-201ENST00000619465 191 ntBASIC2.24□□□□□ -2.05
RB1P06400 U2.10-201ENST00000620268 191 ntBASIC2.24□□□□□ -2.05
RB1P06400 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.24□□□□□ -2.05
RB1P06400 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.24□□□□□ -2.05
RB1P06400 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
RB1P06400 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
RB1P06400 RNU6-593P-201ENST00000364716 112 ntBASIC2.23□□□□□ -2.05
RB1P06400 Y_RNA.339-201ENST00000365325 102 ntBASIC2.23□□□□□ -2.05
RB1P06400 RNU1-51P-201ENST00000365345 176 ntBASIC2.23□□□□□ -2.05
RB1P06400 SNORD14D-201ENST00000384390 87 ntBASIC2.23□□□□□ -2.05
RB1P06400 RNA5SP213-201ENST00000391031 106 ntBASIC2.23□□□□□ -2.05
RB1P06400 RNU6-174P-201ENST00000410406 106 ntBASIC2.23□□□□□ -2.05
RB1P06400 RPL23AP36-201ENST00000413895 458 ntBASIC2.23□□□□□ -2.05
RB1P06400 AC138393.2-201ENST00000414742 246 ntBASIC2.23□□□□□ -2.05
RB1P06400 PDCL2P1-201ENST00000419302 352 ntBASIC2.23□□□□□ -2.05
RB1P06400 AC245102.2-201ENST00000448956 180 ntBASIC2.23□□□□□ -2.05
RB1P06400 AC107399.1-201ENST00000451226 265 ntBASIC2.23□□□□□ -2.05
RB1P06400 AC116353.2-201ENST00000505332 712 ntBASIC2.23□□□□□ -2.05
RB1P06400 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.23□□□□□ -2.05
RB1P06400 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.23□□□□□ -2.05
RB1P06400 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.23□□□□□ -2.05
RB1P06400 MIR4498-201ENST00000577599 66 ntBASIC2.23□□□□□ -2.05
RB1P06400 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.23□□□□□ -2.05
RB1P06400 RPL17P51-201ENST00000605218 238 ntBASIC2.23□□□□□ -2.05
RB1P06400 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.23□□□□□ -2.05
RB1P06400 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.23□□□□□ -2.05
RB1P06400 AC137590.2-201ENST00000619709 240 ntBASIC2.23□□□□□ -2.05
RB1P06400 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.23□□□□□ -2.05
RB1P06400 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RB1P06400 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RB1P06400 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RB1P06400 RNU1-76P-201ENST00000362903 159 ntBASIC2.22□□□□□ -2.05
RB1P06400 RNU4-9P-201ENST00000364951 139 ntBASIC2.22□□□□□ -2.05
RB1P06400 SNORA40.19-201ENST00000390846 128 ntBASIC2.22□□□□□ -2.05
RB1P06400 AC098614.3-201ENST00000438957 440 ntBASIC2.22□□□□□ -2.05
RB1P06400 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.22□□□□□ -2.05
RB1P06400 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.22□□□□□ -2.05
RB1P06400 FO393415.2-201ENST00000480085 343 ntBASIC2.22□□□□□ -2.05
RB1P06400 AC103851.1-201ENST00000506833 274 ntBASIC2.22□□□□□ -2.05
RB1P06400 RNU5F-4P-201ENST00000516581 114 ntBASIC2.22□□□□□ -2.05
RB1P06400 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.22□□□□□ -2.05
RB1P06400 MIR4273-201ENST00000582824 84 ntBASIC2.22□□□□□ -2.05
RB1P06400 AC018462.2-201ENST00000605375 395 ntBASIC2.22□□□□□ -2.05
RB1P06400 AL137847.3-201ENST00000611521 109 ntBASIC2.22□□□□□ -2.05
RB1P06400 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.21□□□□□ -2.06
RB1P06400 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.21□□□□□ -2.06
RB1P06400 Y_RNA.99-201ENST00000363138 105 ntBASIC2.21□□□□□ -2.06
RB1P06400 Y_RNA.164-201ENST00000363709 102 ntBASIC2.21□□□□□ -2.06
RB1P06400 SNORA16B-201ENST00000364674 135 ntBASIC2.21□□□□□ -2.06
RB1P06400 RNU6-842P-201ENST00000384269 107 ntBASIC2.21□□□□□ -2.06
RB1P06400 MIR518A2-201ENST00000384966 87 ntBASIC2.21□□□□□ -2.06
RB1P06400 MIR29C-201ENST00000385231 88 ntBASIC2.21□□□□□ -2.06
RB1P06400 U3.40-201ENST00000408706 208 ntBASIC2.21□□□□□ -2.06
RB1P06400 Y_RNA.595-201ENST00000410403 105 ntBASIC2.21□□□□□ -2.06
RB1P06400 RPL37P10-201ENST00000412884 288 ntBASIC2.21□□□□□ -2.06
RB1P06400 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.21□□□□□ -2.06
RB1P06400 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.21□□□□□ -2.06
RB1P06400 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.21□□□□□ -2.06
RB1P06400 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
RB1P06400 HMGN2P18-201ENST00000450680 270 ntBASIC2.21□□□□□ -2.06
RB1P06400 RPS27P21-201ENST00000486977 252 ntBASIC2.21□□□□□ -2.06
RB1P06400 ATP5EP1-201ENST00000510257 156 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms