Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.25□□□□□ -2.21
HLA-DPB1P04440 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.25□□□□□ -2.21
HLA-DPB1P04440 SNRPGP13-201ENST00000442212 177 ntBASIC1.25□□□□□ -2.21
HLA-DPB1P04440 RPS29P23-201ENST00000458635 123 ntBASIC1.25□□□□□ -2.21
HLA-DPB1P04440 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.25□□□□□ -2.21
HLA-DPB1P04440 SNORA31.24-201ENST00000517232 57 ntBASIC1.25□□□□□ -2.21
HLA-DPB1P04440 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.25□□□□□ -2.21
HLA-DPB1P04440 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.25□□□□□ -2.21
HLA-DPB1P04440 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.25□□□□□ -2.21
HLA-DPB1P04440 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
HLA-DPB1P04440 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.25□□□□□ -2.21
HLA-DPB1P04440 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.25□□□□□ -2.21
HLA-DPB1P04440 AC016925.2-201ENST00000605108 242 ntBASIC1.25□□□□□ -2.21
HLA-DPB1P04440 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.25□□□□□ -2.21
HLA-DPB1P04440 AC104458.1-201ENST00000608243 463 ntBASIC1.25□□□□□ -2.21
HLA-DPB1P04440 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HLA-DPB1P04440 OR4G1P-203ENST00000641984 1631 ntBASIC1.25□□□□□ -2.21
HLA-DPB1P04440 RNU4-13P-201ENST00000364019 141 ntBASIC1.24□□□□□ -2.21
HLA-DPB1P04440 RNU6-418P-201ENST00000384035 107 ntBASIC1.24□□□□□ -2.21
HLA-DPB1P04440 RNU6-1026P-201ENST00000384465 108 ntBASIC1.24□□□□□ -2.21
HLA-DPB1P04440 MIR487A-201ENST00000385009 80 ntBASIC1.24□□□□□ -2.21
HLA-DPB1P04440 RN7SKP51-201ENST00000410781 304 ntBASIC1.24□□□□□ -2.21
HLA-DPB1P04440 NCOR1P3-201ENST00000420479 303 ntBASIC1.24□□□□□ -2.21
HLA-DPB1P04440 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DPB1P04440 MTCO1P20-201ENST00000425366 358 ntBASIC1.24□□□□□ -2.21
HLA-DPB1P04440 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DPB1P04440 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
HLA-DPB1P04440 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.24□□□□□ -2.21
HLA-DPB1P04440 U8.21-201ENST00000459536 136 ntBASIC1.24□□□□□ -2.21
HLA-DPB1P04440 RPS23P5-201ENST00000495419 428 ntBASIC1.24□□□□□ -2.21
HLA-DPB1P04440 AC008834.1-201ENST00000511612 175 ntBASIC1.24□□□□□ -2.21
HLA-DPB1P04440 Y_RNA.665-201ENST00000516177 98 ntBASIC1.24□□□□□ -2.21
HLA-DPB1P04440 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DPB1P04440 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DPB1P04440 CPDP1-201ENST00000579660 283 ntBASIC1.24□□□□□ -2.21
HLA-DPB1P04440 MIR4285-201ENST00000581001 85 ntBASIC1.24□□□□□ -2.21
HLA-DPB1P04440 AC010525.2-201ENST00000590920 195 ntBASIC1.24□□□□□ -2.21
HLA-DPB1P04440 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.24□□□□□ -2.21
HLA-DPB1P04440 AC083806.3-201ENST00000614016 455 ntBASIC1.24□□□□□ -2.21
HLA-DPB1P04440 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.24□□□□□ -2.21
HLA-DPB1P04440 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.24□□□□□ -2.21
HLA-DPB1P04440 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.24□□□□□ -2.21
HLA-DPB1P04440 AC068137.3-201ENST00000639191 341 ntBASIC1.24□□□□□ -2.21
HLA-DPB1P04440 AC121333.1-201ENST00000567488 2709 ntBASIC1.24□□□□□ -2.21
HLA-DPB1P04440 AL159152.1-201ENST00000635019 2587 ntBASIC1.24□□□□□ -2.21
HLA-DPB1P04440 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HLA-DPB1P04440 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
HLA-DPB1P04440 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HLA-DPB1P04440 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.23□□□□□ -2.21
HLA-DPB1P04440 RNU6-862P-201ENST00000362804 105 ntBASIC1.23□□□□□ -2.21
HLA-DPB1P04440 RNU6-877P-201ENST00000383868 107 ntBASIC1.23□□□□□ -2.21
HLA-DPB1P04440 RNU6-1286P-201ENST00000383871 107 ntBASIC1.23□□□□□ -2.21
HLA-DPB1P04440 RNU6-338P-201ENST00000383888 105 ntBASIC1.23□□□□□ -2.21
HLA-DPB1P04440 RNU6-908P-201ENST00000410160 94 ntBASIC1.23□□□□□ -2.21
HLA-DPB1P04440 RNA5SP494-201ENST00000410653 129 ntBASIC1.23□□□□□ -2.21
HLA-DPB1P04440 Y_RNA.615-201ENST00000410769 117 ntBASIC1.23□□□□□ -2.21
HLA-DPB1P04440 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DPB1P04440 RPL21P111-201ENST00000418453 477 ntBASIC1.23□□□□□ -2.21
HLA-DPB1P04440 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.23□□□□□ -2.21
HLA-DPB1P04440 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HLA-DPB1P04440 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.23□□□□□ -2.21
HLA-DPB1P04440 DLGAP5P1-201ENST00000430307 464 ntBASIC1.23□□□□□ -2.21
HLA-DPB1P04440 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.23□□□□□ -2.21
HLA-DPB1P04440 AC015922.2-201ENST00000435593 184 ntBASIC1.23□□□□□ -2.21
HLA-DPB1P04440 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DPB1P04440 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DPB1P04440 Z83846.1-201ENST00000446798 265 ntBASIC1.23□□□□□ -2.21
HLA-DPB1P04440 AC093534.1-201ENST00000504977 132 ntBASIC1.23□□□□□ -2.21
HLA-DPB1P04440 RNU6-1281P-201ENST00000516223 105 ntBASIC1.23□□□□□ -2.21
HLA-DPB1P04440 SUMO2P18-201ENST00000518873 252 ntBASIC1.23□□□□□ -2.21
HLA-DPB1P04440 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.23□□□□□ -2.21
HLA-DPB1P04440 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DPB1P04440 AC016256.1-201ENST00000547971 354 ntBASIC1.23□□□□□ -2.21
HLA-DPB1P04440 DNAJC19P9-201ENST00000555084 351 ntBASIC1.23□□□□□ -2.21
HLA-DPB1P04440 HSBP1P1-201ENST00000555205 166 ntBASIC1.23□□□□□ -2.21
HLA-DPB1P04440 AC048344.4-201ENST00000619744 527 ntBASIC1.23□□□□□ -2.21
HLA-DPB1P04440 AC073534.2-201ENST00000620377 381 ntBASIC1.23□□□□□ -2.21
HLA-DPB1P04440 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.23□□□□□ -2.21
HLA-DPB1P04440 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.23□□□□□ -2.21
HLA-DPB1P04440 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DPB1P04440 MIR126-201ENST00000362291 85 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 RNU6-661P-201ENST00000362409 107 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 RNU6-562P-201ENST00000362731 107 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 RNU6-1252P-201ENST00000363054 104 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 Y_RNA.140-201ENST00000363474 103 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 SNORD113-7-201ENST00000363762 77 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 RNU6-968P-201ENST00000384076 107 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 RNU6-214P-201ENST00000384130 107 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 U8.10-201ENST00000384260 133 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 MIR521-1-201ENST00000384902 87 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 AC245047.4-201ENST00000433189 144 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 ERLEC1P1-201ENST00000433806 578 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 SEPT14P3-201ENST00000439401 183 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 AC004386.2-201ENST00000441858 148 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 AL732372.2-207ENST00000445840 183 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 AL357134.1-201ENST00000445848 426 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 AC007395.1-201ENST00000451333 677 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 SEPT14P2-201ENST00000453405 183 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 snoU13.30-201ENST00000458951 104 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 RNU7-187P-201ENST00000458985 68 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms