Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 USP9YP14-201ENST00000430663 563 ntBASIC0.38□□□□□ -2.35
COL1A1P02452 AC119618.1-201ENST00000434191 222 ntBASIC0.38□□□□□ -2.35
COL1A1P02452 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.38□□□□□ -2.35
COL1A1P02452 AC016925.1-201ENST00000458303 298 ntBASIC0.38□□□□□ -2.35
COL1A1P02452 MTCO2P29-201ENST00000465212 189 ntBASIC0.38□□□□□ -2.35
COL1A1P02452 AC104136.1-201ENST00000512969 394 ntBASIC0.38□□□□□ -2.35
COL1A1P02452 SNORA31.4-201ENST00000516049 129 ntBASIC0.38□□□□□ -2.35
COL1A1P02452 RNA5SP168-201ENST00000516642 112 ntBASIC0.38□□□□□ -2.35
COL1A1P02452 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.38□□□□□ -2.35
COL1A1P02452 AC012507.3-201ENST00000603556 477 ntBASIC0.38□□□□□ -2.35
COL1A1P02452 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.38□□□□□ -2.35
COL1A1P02452 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.38□□□□□ -2.35
COL1A1P02452 AL157786.1-207ENST00000627771 695 ntBASIC0.38□□□□□ -2.35
COL1A1P02452 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
COL1A1P02452 RNU6-1123P-201ENST00000362347 106 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 RNU6-877P-201ENST00000383868 107 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 RNU6-378P-201ENST00000384324 107 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 RNU6-757P-201ENST00000410334 100 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 RNU6-387P-201ENST00000411331 105 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 AC060773.1-201ENST00000421698 310 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 CALM2P2-201ENST00000428512 440 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.37□□□□□ -2.35
COL1A1P02452 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.37□□□□□ -2.35
COL1A1P02452 GAPDHP17-201ENST00000449858 1001 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 AC010531.2-201ENST00000465012 153 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 COX6CP6-201ENST00000490840 228 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 AC010587.1-201ENST00000505809 469 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.37□□□□□ -2.35
COL1A1P02452 AC011406.1-201ENST00000512440 370 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.37□□□□□ -2.35
COL1A1P02452 AC112206.4-201ENST00000515142 405 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 RNU4-54P-201ENST00000516428 129 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 AC109479.2-201ENST00000517842 174 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 MTND4LP18-201ENST00000526864 291 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 ZNF321P-202ENST00000550843 495 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 AC021231.3-201ENST00000558497 370 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 TMF1P1-201ENST00000576058 373 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 AC105129.3-201ENST00000605455 485 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 AC013244.3-201ENST00000605614 388 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 AC012557.2-201ENST00000605919 418 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 AL138960.2-201ENST00000625145 535 ntBASIC0.37□□□□□ -2.35
COL1A1P02452 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.36□□□□□ -2.35
COL1A1P02452 AC092268.1-201ENST00000342691 405 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 RNA5SP361-201ENST00000362686 118 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 Y_RNA.142-201ENST00000363491 102 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 RNA5SP368-201ENST00000364298 116 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 SNORA72.2-201ENST00000365028 127 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 RNU6-61P-201ENST00000365528 109 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
COL1A1P02452 RNU6-641P-201ENST00000384006 107 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 RNU6-692P-201ENST00000384496 107 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 RNU6-950P-201ENST00000384651 107 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 MIR32-201ENST00000384965 70 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
COL1A1P02452 SNORD12-201ENST00000391002 90 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.36□□□□□ -2.35
COL1A1P02452 RNU6-1054P-201ENST00000411293 104 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 EEF1A1P40-201ENST00000412883 573 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.36□□□□□ -2.35
COL1A1P02452 AC063976.4-201ENST00000421971 163 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 AC002429.1-201ENST00000437672 148 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.36□□□□□ -2.35
COL1A1P02452 AC007547.1-201ENST00000462177 490 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 RPL39P38-201ENST00000467018 153 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 RPS27P22-201ENST00000478056 241 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 HMGN1P12-201ENST00000499125 195 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 AC112204.1-201ENST00000502591 103 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
COL1A1P02452 RNU6-1146P-201ENST00000516282 102 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 RNU6-948P-201ENST00000516374 107 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 AC105185.1-201ENST00000518705 535 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.36□□□□□ -2.35
COL1A1P02452 AC090888.2-201ENST00000559765 1144 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 AP000484.1-201ENST00000620067 1252 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 AC136475.10-201ENST00000620253 385 ntBASIC0.36□□□□□ -2.35
COL1A1P02452 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.36□□□□□ -2.35
COL1A1P02452 Y_RNA.302-201ENST00000364997 102 ntBASIC0.35□□□□□ -2.35
COL1A1P02452 Y_RNA.488-201ENST00000384403 102 ntBASIC0.35□□□□□ -2.35
COL1A1P02452 RNU6-30P-201ENST00000384561 107 ntBASIC0.35□□□□□ -2.35
COL1A1P02452 MIR558-201ENST00000384920 94 ntBASIC0.35□□□□□ -2.35
COL1A1P02452 RNU6-910P-201ENST00000390844 107 ntBASIC0.35□□□□□ -2.35
COL1A1P02452 RPS3AP1-201ENST00000413190 320 ntBASIC0.35□□□□□ -2.35
COL1A1P02452 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.35□□□□□ -2.35
COL1A1P02452 MED13P1-201ENST00000428342 171 ntBASIC0.35□□□□□ -2.35
COL1A1P02452 AL133396.1-201ENST00000432048 687 ntBASIC0.35□□□□□ -2.35
COL1A1P02452 AC002486.1-201ENST00000435098 391 ntBASIC0.35□□□□□ -2.35
COL1A1P02452 BET1P1-201ENST00000482276 359 ntBASIC0.35□□□□□ -2.35
COL1A1P02452 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.35□□□□□ -2.35
COL1A1P02452 RNU6-567P-201ENST00000516746 107 ntBASIC0.35□□□□□ -2.35
COL1A1P02452 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.35□□□□□ -2.35
COL1A1P02452 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.35□□□□□ -2.35
COL1A1P02452 SNORA59B-202ENST00000578183 701 ntBASIC0.35□□□□□ -2.35
COL1A1P02452 MIR4723-201ENST00000585070 81 ntBASIC0.35□□□□□ -2.35
COL1A1P02452 Z99289.3-201ENST00000605586 594 ntBASIC0.35□□□□□ -2.35
COL1A1P02452 AL353149.1-201ENST00000610667 244 ntBASIC0.35□□□□□ -2.35
COL1A1P02452 AC104465.1-201ENST00000611365 139 ntBASIC0.35□□□□□ -2.35
COL1A1P02452 RNU6-545P-201ENST00000362681 104 ntBASIC0.35□□□□□ -2.35
COL1A1P02452 Y_RNA.124-201ENST00000363339 93 ntBASIC0.35□□□□□ -2.35
COL1A1P02452 RNY1P12-201ENST00000364251 105 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms