Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 RNU6-784P-201ENST00000384330 106 ntBASIC1.5□□□□□ -2.17
MBD3O95983 MIR520A-201ENST00000384862 85 ntBASIC1.5□□□□□ -2.17
MBD3O95983 MTCO3P40-201ENST00000392516 676 ntBASIC1.5□□□□□ -2.17
MBD3O95983 RNU2-66P-201ENST00000410650 161 ntBASIC1.5□□□□□ -2.17
MBD3O95983 EBAG9P1-201ENST00000418955 543 ntBASIC1.5□□□□□ -2.17
MBD3O95983 USP9YP28-201ENST00000435142 589 ntBASIC1.5□□□□□ -2.17
MBD3O95983 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.5□□□□□ -2.17
MBD3O95983 AC007677.1-201ENST00000445757 515 ntBASIC1.5□□□□□ -2.17
MBD3O95983 MTCYBP18-201ENST00000501056 747 ntBASIC1.5□□□□□ -2.17
MBD3O95983 AC108210.2-201ENST00000503681 201 ntBASIC1.5□□□□□ -2.17
MBD3O95983 Y_RNA.693-201ENST00000516641 110 ntBASIC1.5□□□□□ -2.17
MBD3O95983 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.5□□□□□ -2.17
MBD3O95983 MTND2P38-201ENST00000522536 667 ntBASIC1.5□□□□□ -2.17
MBD3O95983 MIR5094-201ENST00000578766 85 ntBASIC1.5□□□□□ -2.17
MBD3O95983 MIR4422-201ENST00000581938 83 ntBASIC1.5□□□□□ -2.17
MBD3O95983 NBR2-204ENST00000587322 63 ntBASIC1.5□□□□□ -2.17
MBD3O95983 AC069114.2-201ENST00000604699 304 ntBASIC1.5□□□□□ -2.17
MBD3O95983 MIR8076-201ENST00000611401 83 ntBASIC1.5□□□□□ -2.17
MBD3O95983 AC005562.2-201ENST00000618264 111 ntBASIC1.5□□□□□ -2.17
MBD3O95983 AC068792.1-201ENST00000621354 417 ntBASIC1.5□□□□□ -2.17
MBD3O95983 AL359880.1-201ENST00000621879 266 ntBASIC1.5□□□□□ -2.17
MBD3O95983 AC097520.1-201ENST00000624435 385 ntBASIC1.5□□□□□ -2.17
MBD3O95983 MIR6863-201ENST00000636112 90 ntBASIC1.5□□□□□ -2.17
MBD3O95983 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.5□□□□□ -2.17
MBD3O95983 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
MBD3O95983 MIR1283-1-201ENST00000408494 87 ntBASIC1.49□□□□□ -2.17
MBD3O95983 AC099677.2-201ENST00000436385 175 ntBASIC1.49□□□□□ -2.17
MBD3O95983 MTND1P29-201ENST00000448112 647 ntBASIC1.49□□□□□ -2.17
MBD3O95983 RPS29P29-201ENST00000456396 171 ntBASIC1.49□□□□□ -2.17
MBD3O95983 RPL26P26-201ENST00000480251 434 ntBASIC1.49□□□□□ -2.17
MBD3O95983 MTCO1P29-201ENST00000496868 288 ntBASIC1.49□□□□□ -2.17
MBD3O95983 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.49□□□□□ -2.17
MBD3O95983 AC092436.3-201ENST00000511788 257 ntBASIC1.49□□□□□ -2.17
MBD3O95983 RPL39P5-202ENST00000512505 151 ntBASIC1.49□□□□□ -2.17
MBD3O95983 RN7SKP179-201ENST00000516126 217 ntBASIC1.49□□□□□ -2.17
MBD3O95983 RNU6-295P-201ENST00000516901 104 ntBASIC1.49□□□□□ -2.17
MBD3O95983 RNU6-548P-201ENST00000517083 115 ntBASIC1.49□□□□□ -2.17
MBD3O95983 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.49□□□□□ -2.17
MBD3O95983 AC025423.5-201ENST00000550230 219 ntBASIC1.49□□□□□ -2.17
MBD3O95983 SNORA77B-201ENST00000578179 125 ntBASIC1.49□□□□□ -2.17
MBD3O95983 AC011494.1-201ENST00000596454 237 ntBASIC1.49□□□□□ -2.17
MBD3O95983 AP001485.1-201ENST00000604799 199 ntBASIC1.49□□□□□ -2.17
MBD3O95983 CTHRC1P1-201ENST00000605383 469 ntBASIC1.49□□□□□ -2.17
MBD3O95983 AC083806.3-201ENST00000614016 455 ntBASIC1.49□□□□□ -2.17
MBD3O95983 AL158209.2-201ENST00000619266 216 ntBASIC1.49□□□□□ -2.17
MBD3O95983 AC068205.3-201ENST00000636385 468 ntBASIC1.49□□□□□ -2.17
MBD3O95983 RNU6-1317P-201ENST00000364582 104 ntBASIC1.48□□□□□ -2.17
MBD3O95983 SNORA18.2-201ENST00000383865 132 ntBASIC1.48□□□□□ -2.17
MBD3O95983 RNA5SP494-201ENST00000410653 129 ntBASIC1.48□□□□□ -2.17
MBD3O95983 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.48□□□□□ -2.17
MBD3O95983 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.48□□□□□ -2.17
MBD3O95983 AC069257.2-201ENST00000441819 155 ntBASIC1.48□□□□□ -2.17
MBD3O95983 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.48□□□□□ -2.17
MBD3O95983 snoU13.9-201ENST00000458927 103 ntBASIC1.48□□□□□ -2.17
MBD3O95983 AC107401.1-201ENST00000503426 685 ntBASIC1.48□□□□□ -2.17
MBD3O95983 HMGN1P13-201ENST00000505795 138 ntBASIC1.48□□□□□ -2.17
MBD3O95983 AC116337.1-201ENST00000509680 687 ntBASIC1.48□□□□□ -2.17
MBD3O95983 RNU6-1038P-201ENST00000516516 104 ntBASIC1.48□□□□□ -2.17
MBD3O95983 RNA5SP481-201ENST00000516814 122 ntBASIC1.48□□□□□ -2.17
MBD3O95983 AC090821.2-201ENST00000523552 176 ntBASIC1.48□□□□□ -2.17
MBD3O95983 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
MBD3O95983 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.48□□□□□ -2.17
MBD3O95983 AP005136.1-201ENST00000579765 429 ntBASIC1.48□□□□□ -2.17
MBD3O95983 AC104458.1-201ENST00000608243 463 ntBASIC1.48□□□□□ -2.17
MBD3O95983 AL121757.2-201ENST00000611223 313 ntBASIC1.48□□□□□ -2.17
MBD3O95983 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.48□□□□□ -2.17
MBD3O95983 FER-210ENST00000628534 558 ntTSL 5 BASIC1.48□□□□□ -2.17
MBD3O95983 AC068137.3-201ENST00000639191 341 ntBASIC1.48□□□□□ -2.17
MBD3O95983 AC010615.1-201ENST00000594254 1764 ntBASIC1.48□□□□□ -2.17
MBD3O95983 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
MBD3O95983 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.47□□□□□ -2.17
MBD3O95983 Y_RNA.231-201ENST00000364358 102 ntBASIC1.47□□□□□ -2.17
MBD3O95983 SNORA63D-201ENST00000364359 132 ntBASIC1.47□□□□□ -2.17
MBD3O95983 RNU6-128P-201ENST00000383976 107 ntBASIC1.47□□□□□ -2.17
MBD3O95983 Y_RNA.409-201ENST00000383990 98 ntBASIC1.47□□□□□ -2.17
MBD3O95983 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.47□□□□□ -2.17
MBD3O95983 AL117342.1-201ENST00000404861 406 ntBASIC1.47□□□□□ -2.17
MBD3O95983 RPL21P111-201ENST00000418453 477 ntBASIC1.47□□□□□ -2.17
MBD3O95983 MTND3P9-201ENST00000429526 346 ntBASIC1.47□□□□□ -2.17
MBD3O95983 AC245047.4-201ENST00000433189 144 ntBASIC1.47□□□□□ -2.17
MBD3O95983 JTBP1-201ENST00000441314 247 ntBASIC1.47□□□□□ -2.17
MBD3O95983 AC009237.7-201ENST00000447357 229 ntBASIC1.47□□□□□ -2.17
MBD3O95983 AC245517.4-201ENST00000448601 281 ntBASIC1.47□□□□□ -2.17
MBD3O95983 OR2AQ1P-201ENST00000451972 200 ntBASIC1.47□□□□□ -2.17
MBD3O95983 RNU1-123P-201ENST00000458950 160 ntBASIC1.47□□□□□ -2.17
MBD3O95983 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.47□□□□□ -2.17
MBD3O95983 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.47□□□□□ -2.17
MBD3O95983 RNU6-948P-201ENST00000516374 107 ntBASIC1.47□□□□□ -2.17
MBD3O95983 DEFB131C-201ENST00000528817 165 ntBASIC1.47□□□□□ -2.17
MBD3O95983 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.47□□□□□ -2.17
MBD3O95983 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.47□□□□□ -2.17
MBD3O95983 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.47□□□□□ -2.17
MBD3O95983 PIGPP4-201ENST00000584447 307 ntBASIC1.47□□□□□ -2.17
MBD3O95983 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.47□□□□□ -2.17
MBD3O95983 RNU6-89P-201ENST00000606519 100 ntBASIC1.47□□□□□ -2.17
MBD3O95983 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.47□□□□□ -2.17
MBD3O95983 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
MBD3O95983 BX322639.1-202ENST00000423987 2213 ntBASIC1.46□□□□□ -2.18
MBD3O95983 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
MBD3O95983 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms