Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.37□□□□□ -2.03
DDX58O95786 AP005660.1-201ENST00000522972 293 ntBASIC2.37□□□□□ -2.03
DDX58O95786 AC016256.1-201ENST00000547971 354 ntBASIC2.37□□□□□ -2.03
DDX58O95786 AL022345.1-201ENST00000607292 135 ntBASIC2.37□□□□□ -2.03
DDX58O95786 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.37□□□□□ -2.03
DDX58O95786 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.37□□□□□ -2.03
DDX58O95786 AC130454.1-201ENST00000622948 401 ntBASIC2.37□□□□□ -2.03
DDX58O95786 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.37□□□□□ -2.03
DDX58O95786 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
DDX58O95786 Y_RNA.99-201ENST00000363138 105 ntBASIC2.36□□□□□ -2.03
DDX58O95786 RNA5SP99-201ENST00000364020 114 ntBASIC2.36□□□□□ -2.03
DDX58O95786 SNORA16B-201ENST00000364674 135 ntBASIC2.36□□□□□ -2.03
DDX58O95786 RNU6-767P-201ENST00000384132 107 ntBASIC2.36□□□□□ -2.03
DDX58O95786 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
DDX58O95786 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
DDX58O95786 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.36□□□□□ -2.03
DDX58O95786 DAP3P1-201ENST00000441522 278 ntBASIC2.36□□□□□ -2.03
DDX58O95786 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.36□□□□□ -2.03
DDX58O95786 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.36□□□□□ -2.03
DDX58O95786 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.36□□□□□ -2.03
DDX58O95786 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.36□□□□□ -2.03
DDX58O95786 MIR4273-201ENST00000582824 84 ntBASIC2.36□□□□□ -2.03
DDX58O95786 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.36□□□□□ -2.03
DDX58O95786 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.36□□□□□ -2.03
DDX58O95786 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.35□□□□□ -2.03
DDX58O95786 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.35□□□□□ -2.03
DDX58O95786 RNA5SP276-201ENST00000362580 94 ntBASIC2.35□□□□□ -2.03
DDX58O95786 RNU6-784P-201ENST00000384330 106 ntBASIC2.35□□□□□ -2.03
DDX58O95786 RNU6-1026P-201ENST00000384465 108 ntBASIC2.35□□□□□ -2.03
DDX58O95786 MT-TL1-201ENST00000386347 75 ntBASIC2.35□□□□□ -2.03
DDX58O95786 CYCSP49-201ENST00000420810 319 ntBASIC2.35□□□□□ -2.03
DDX58O95786 AL603825.1-201ENST00000438481 80 ntBASIC2.35□□□□□ -2.03
DDX58O95786 AC003989.2-201ENST00000440224 169 ntBASIC2.35□□□□□ -2.03
DDX58O95786 HMGN2P18-201ENST00000450680 270 ntBASIC2.35□□□□□ -2.03
DDX58O95786 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.35□□□□□ -2.03
DDX58O95786 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.35□□□□□ -2.03
DDX58O95786 ZNF702P-202ENST00000434269 1966 ntBASIC2.34□□□□□ -2.03
DDX58O95786 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
DDX58O95786 BX510359.4-201ENST00000423750 193 ntBASIC2.34□□□□□ -2.03
DDX58O95786 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.34□□□□□ -2.03
DDX58O95786 RNU7-14P-201ENST00000459331 62 ntBASIC2.34□□□□□ -2.03
DDX58O95786 RPL23AP63-201ENST00000498752 471 ntBASIC2.34□□□□□ -2.03
DDX58O95786 PRDX4P1-201ENST00000507189 574 ntBASIC2.34□□□□□ -2.03
DDX58O95786 RNU7-30P-201ENST00000516835 62 ntBASIC2.34□□□□□ -2.03
DDX58O95786 RPL17P51-201ENST00000605218 238 ntBASIC2.34□□□□□ -2.03
DDX58O95786 AL359314.1-201ENST00000616913 261 ntBASIC2.34□□□□□ -2.03
DDX58O95786 AL133216.2-202ENST00000634512 349 ntBASIC2.34□□□□□ -2.03
DDX58O95786 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
DDX58O95786 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.34□□□□□ -2.03
DDX58O95786 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.04
DDX58O95786 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
DDX58O95786 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
DDX58O95786 RNU5B-2P-201ENST00000363036 113 ntBASIC2.33□□□□□ -2.04
DDX58O95786 RNU6-160P-201ENST00000384591 107 ntBASIC2.33□□□□□ -2.04
DDX58O95786 MIR17-201ENST00000385012 84 ntBASIC2.33□□□□□ -2.04
DDX58O95786 RNU2-41P-201ENST00000410991 178 ntBASIC2.33□□□□□ -2.04
DDX58O95786 MTCO3P46-201ENST00000425787 232 ntBASIC2.33□□□□□ -2.04
DDX58O95786 MTND1P17-201ENST00000448961 204 ntBASIC2.33□□□□□ -2.04
DDX58O95786 RPS23P5-201ENST00000495419 428 ntBASIC2.33□□□□□ -2.04
DDX58O95786 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.33□□□□□ -2.04
DDX58O95786 ANP32BP3-201ENST00000559213 706 ntBASIC2.33□□□□□ -2.04
DDX58O95786 CYP2C61P-201ENST00000604072 290 ntBASIC2.33□□□□□ -2.04
DDX58O95786 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.33□□□□□ -2.04
DDX58O95786 ZNF72P-201ENST00000425869 1908 ntBASIC2.32□□□□□ -2.04
DDX58O95786 AL596028.1-201ENST00000326971 197 ntBASIC2.32□□□□□ -2.04
DDX58O95786 SNORD50.1-201ENST00000362987 71 ntBASIC2.32□□□□□ -2.04
DDX58O95786 MIR9-3-201ENST00000385084 90 ntBASIC2.32□□□□□ -2.04
DDX58O95786 RNA5SP465-201ENST00000391195 109 ntBASIC2.32□□□□□ -2.04
DDX58O95786 MIR548F5-201ENST00000408421 86 ntBASIC2.32□□□□□ -2.04
DDX58O95786 RNA5SP450-201ENST00000411206 102 ntBASIC2.32□□□□□ -2.04
DDX58O95786 AC074085.1-201ENST00000413598 418 ntBASIC2.32□□□□□ -2.04
DDX58O95786 WARS2P1-201ENST00000429678 537 ntBASIC2.32□□□□□ -2.04
DDX58O95786 PMCHL2-203ENST00000457791 237 ntBASIC2.32□□□□□ -2.04
DDX58O95786 AC087477.1-201ENST00000465747 340 ntBASIC2.32□□□□□ -2.04
DDX58O95786 FO393415.2-201ENST00000480085 343 ntBASIC2.32□□□□□ -2.04
DDX58O95786 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.32□□□□□ -2.04
DDX58O95786 RPL23AP75-201ENST00000491601 451 ntBASIC2.32□□□□□ -2.04
DDX58O95786 AC046134.1-201ENST00000514454 666 ntBASIC2.32□□□□□ -2.04
DDX58O95786 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.32□□□□□ -2.04
DDX58O95786 AC005520.5-201ENST00000613926 164 ntBASIC2.32□□□□□ -2.04
DDX58O95786 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.32□□□□□ -2.04
DDX58O95786 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.32□□□□□ -2.04
DDX58O95786 DUXAP9-208ENST00000622815 614 ntBASIC2.32□□□□□ -2.04
DDX58O95786 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
DDX58O95786 MTND4P1-201ENST00000457501 1466 ntBASIC2.32□□□□□ -2.04
DDX58O95786 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
DDX58O95786 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
DDX58O95786 AC008555.8-201ENST00000623602 2168 ntBASIC2.32□□□□□ -2.04
DDX58O95786 MTND5P9-201ENST00000503854 1755 ntBASIC2.31□□□□□ -2.04
DDX58O95786 RNU1-58P-201ENST00000362413 163 ntBASIC2.31□□□□□ -2.04
DDX58O95786 RNU6-23P-201ENST00000363283 107 ntBASIC2.31□□□□□ -2.04
DDX58O95786 AL512604.1-201ENST00000404812 257 ntBASIC2.31□□□□□ -2.04
DDX58O95786 RPL21P111-201ENST00000418453 477 ntBASIC2.31□□□□□ -2.04
DDX58O95786 USP9YP30-201ENST00000430729 455 ntBASIC2.31□□□□□ -2.04
DDX58O95786 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.31□□□□□ -2.04
DDX58O95786 AC107399.1-201ENST00000451226 265 ntBASIC2.31□□□□□ -2.04
DDX58O95786 AF186996.7-201ENST00000492781 209 ntBASIC2.31□□□□□ -2.04
DDX58O95786 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.31□□□□□ -2.04
DDX58O95786 MTND5P5-201ENST00000503764 376 ntBASIC2.31□□□□□ -2.04
DDX58O95786 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms