Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
ABCA1O95477 MIR103A2-201ENST00000362154 78 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 SNORA32.3-201ENST00000384772 121 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 AL031779.1-201ENST00000415663 330 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.06□□□□□ -2.4
ABCA1O95477 MTCO2P1-201ENST00000424648 477 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 AC073261.1-201ENST00000429409 121 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 AC245047.3-201ENST00000429428 127 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.06□□□□□ -2.4
ABCA1O95477 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.06□□□□□ -2.4
ABCA1O95477 AC245047.8-201ENST00000456455 284 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.06□□□□□ -2.4
ABCA1O95477 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.06□□□□□ -2.4
ABCA1O95477 AC107934.1-201ENST00000522215 217 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 AC115990.1-201ENST00000526957 301 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 MIR4742-201ENST00000581069 85 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.06□□□□□ -2.4
ABCA1O95477 AL356157.2-201ENST00000605122 111 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 RPL17P51-201ENST00000605218 238 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 SNORD114-16-201ENST00000363044 70 ntBASIC0.05□□□□□ -2.4
ABCA1O95477 RNA5SP98-201ENST00000363158 137 ntBASIC0.05□□□□□ -2.4
ABCA1O95477 Y_RNA.124-201ENST00000363339 93 ntBASIC0.05□□□□□ -2.4
ABCA1O95477 RNU6-511P-201ENST00000363496 107 ntBASIC0.05□□□□□ -2.4
ABCA1O95477 AL603865.2-201ENST00000401679 213 ntBASIC0.05□□□□□ -2.4
ABCA1O95477 RNA5SP504-201ENST00000410676 117 ntBASIC0.05□□□□□ -2.4
ABCA1O95477 HIGD1AP15-201ENST00000416198 280 ntBASIC0.05□□□□□ -2.4
ABCA1O95477 CALM2P2-201ENST00000428512 440 ntBASIC0.05□□□□□ -2.4
ABCA1O95477 STAG3L5P-204ENST00000443759 179 ntBASIC0.05□□□□□ -2.4
ABCA1O95477 MTCO2P18-201ENST00000457151 658 ntBASIC0.05□□□□□ -2.4
ABCA1O95477 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.05□□□□□ -2.4
ABCA1O95477 AC104982.1-201ENST00000478775 574 ntBASIC0.05□□□□□ -2.4
ABCA1O95477 AP000797.1-201ENST00000478870 387 ntBASIC0.05□□□□□ -2.4
ABCA1O95477 AL929325.1-201ENST00000603096 117 ntBASIC0.05□□□□□ -2.4
ABCA1O95477 AL034555.1-201ENST00000604816 211 ntBASIC0.05□□□□□ -2.4
ABCA1O95477 AC012467.1-201ENST00000607740 256 ntBASIC0.05□□□□□ -2.4
ABCA1O95477 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.05□□□□□ -2.4
ABCA1O95477 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.05□□□□□ -2.4
ABCA1O95477 AP000484.1-201ENST00000620067 1252 ntBASIC0.05□□□□□ -2.4
ABCA1O95477 AL513423.1-201ENST00000621695 132 ntBASIC0.05□□□□□ -2.4
ABCA1O95477 RNU6-1335P-201ENST00000365426 107 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 MIR653-201ENST00000385279 96 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 RNA5SP219-201ENST00000390940 113 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 RNA5SP201-201ENST00000410316 124 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 VPS26BP1-201ENST00000417155 755 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 MTCYBP39-201ENST00000437562 491 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 NDUFB4P10-201ENST00000452541 359 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.04□□□□□ -2.4
ABCA1O95477 AC113347.3-201ENST00000509113 148 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 SNORA70.12-201ENST00000516084 153 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 MTND4LP26-201ENST00000518144 282 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.04□□□□□ -2.4
ABCA1O95477 AP002001.1-203ENST00000534002 267 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 AL353765.1-201ENST00000605514 183 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 MIR6516-201ENST00000630554 81 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 RNU6-1305P-201ENST00000364353 104 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 RNU6-654P-201ENST00000364373 107 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 SNORD32A-201ENST00000364805 84 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 Y_RNA.330-201ENST00000365230 109 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 RNU6-302P-201ENST00000365249 107 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 RNU4-45P-201ENST00000365469 141 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 CETN4P-201ENST00000432407 469 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.04□□□□□ -2.4
ABCA1O95477 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.04□□□□□ -2.4
ABCA1O95477 AL606662.1-201ENST00000445763 553 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 snoU13.11-201ENST00000459219 104 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
ABCA1O95477 RNU6-947P-201ENST00000516264 106 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 AC011979.2-201ENST00000527568 352 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.04□□□□□ -2.4
ABCA1O95477 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.04□□□□□ -2.4
ABCA1O95477 AC072039.2-201ENST00000608883 439 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 AC124016.2-201ENST00000610058 665 ntBASIC0.04□□□□□ -2.4
ABCA1O95477 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.04□□□□□ -2.4
ABCA1O95477 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.04□□□□□ -2.4
ABCA1O95477 MIR103A1-201ENST00000362165 78 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 RNU6-1031P-201ENST00000384773 107 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 RNA5SP323-201ENST00000391094 133 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.03□□□□□ -2.4
ABCA1O95477 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.03□□□□□ -2.4
ABCA1O95477 MTND1P32-201ENST00000433043 938 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 RPS29P8-201ENST00000445109 171 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 AC022493.2-201ENST00000506122 481 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.03□□□□□ -2.4
ABCA1O95477 AC116347.2-201ENST00000514912 523 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.03□□□□□ -2.4
ABCA1O95477 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.03□□□□□ -2.4
ABCA1O95477 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.03□□□□□ -2.4
ABCA1O95477 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.03□□□□□ -2.4
ABCA1O95477 AC131280.1-202ENST00000624067 4211 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.03□□□□□ -2.4
ABCA1O95477 RNU4-9P-201ENST00000364951 139 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 MIR660-201ENST00000385235 97 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 AL034345.1-201ENST00000407768 123 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 MTND4P3-201ENST00000417829 541 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 AL049829.1-201ENST00000465411 156 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 AC093534.1-201ENST00000504977 132 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 AC113410.1-201ENST00000505029 247 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 AP002453.2-201ENST00000533503 320 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms