Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 MIR4703-201ENST00000577728 79 ntBASIC0.82□□□□□ -2.28
VAPBO95292 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.82□□□□□ -2.28
VAPBO95292 Z99497.2-201ENST00000603634 310 ntBASIC0.82□□□□□ -2.28
VAPBO95292 AL022161.1-201ENST00000604390 213 ntBASIC0.82□□□□□ -2.28
VAPBO95292 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.82□□□□□ -2.28
VAPBO95292 AC009541.1-201ENST00000438279 2662 ntBASIC0.82□□□□□ -2.28
VAPBO95292 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
VAPBO95292 RNU4-48P-201ENST00000365559 182 ntBASIC0.81□□□□□ -2.28
VAPBO95292 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
VAPBO95292 AC011233.1-201ENST00000422812 283 ntBASIC0.81□□□□□ -2.28
VAPBO95292 RPL39P38-201ENST00000467018 153 ntBASIC0.81□□□□□ -2.28
VAPBO95292 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.81□□□□□ -2.28
VAPBO95292 RNU6-113P-201ENST00000516653 101 ntBASIC0.81□□□□□ -2.28
VAPBO95292 RNU6-165P-201ENST00000517170 99 ntBASIC0.81□□□□□ -2.28
VAPBO95292 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.81□□□□□ -2.28
VAPBO95292 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.81□□□□□ -2.28
VAPBO95292 MIR5006-201ENST00000583027 110 ntBASIC0.81□□□□□ -2.28
VAPBO95292 AL020996.3-201ENST00000606617 222 ntBASIC0.81□□□□□ -2.28
VAPBO95292 AC004223.4-201ENST00000612426 332 ntBASIC0.81□□□□□ -2.28
VAPBO95292 AC006001.4-201ENST00000622243 395 ntBASIC0.81□□□□□ -2.28
VAPBO95292 MTND4P4-201ENST00000439033 1366 ntBASIC0.81□□□□□ -2.28
VAPBO95292 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
VAPBO95292 RNU6-1214P-201ENST00000363650 109 ntBASIC0.8□□□□□ -2.28
VAPBO95292 RNU6-1127P-201ENST00000384580 107 ntBASIC0.8□□□□□ -2.28
VAPBO95292 MIR1-2-201ENST00000384961 85 ntBASIC0.8□□□□□ -2.28
VAPBO95292 SNORA16.2-201ENST00000390991 127 ntBASIC0.8□□□□□ -2.28
VAPBO95292 RPL21P1-201ENST00000399532 476 ntBASIC0.8□□□□□ -2.28
VAPBO95292 RNU6-195P-201ENST00000411352 109 ntBASIC0.8□□□□□ -2.28
VAPBO95292 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.8□□□□□ -2.28
VAPBO95292 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.8□□□□□ -2.28
VAPBO95292 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.8□□□□□ -2.28
VAPBO95292 AC016717.1-201ENST00000448918 286 ntBASIC0.8□□□□□ -2.28
VAPBO95292 GMFBP1-201ENST00000467831 427 ntBASIC0.8□□□□□ -2.28
VAPBO95292 AC103851.1-201ENST00000506833 274 ntBASIC0.8□□□□□ -2.28
VAPBO95292 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.8□□□□□ -2.28
VAPBO95292 MIR548AB-201ENST00000584917 84 ntBASIC0.8□□□□□ -2.28
VAPBO95292 AL929325.1-201ENST00000603096 117 ntBASIC0.8□□□□□ -2.28
VAPBO95292 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.8□□□□□ -2.28
VAPBO95292 AC021506.2-201ENST00000612354 169 ntBASIC0.8□□□□□ -2.28
VAPBO95292 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.8□□□□□ -2.28
VAPBO95292 MIR6767-201ENST00000637302 66 ntBASIC0.8□□□□□ -2.28
VAPBO95292 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
VAPBO95292 RNU6-975P-201ENST00000384296 105 ntBASIC0.79□□□□□ -2.28
VAPBO95292 RNU6-417P-201ENST00000384712 107 ntBASIC0.79□□□□□ -2.28
VAPBO95292 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
VAPBO95292 RNA5SP109-201ENST00000391010 116 ntBASIC0.79□□□□□ -2.28
VAPBO95292 RNU2-64P-201ENST00000411315 191 ntBASIC0.79□□□□□ -2.28
VAPBO95292 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.79□□□□□ -2.28
VAPBO95292 AC004386.2-201ENST00000441858 148 ntBASIC0.79□□□□□ -2.28
VAPBO95292 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.79□□□□□ -2.28
VAPBO95292 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.79□□□□□ -2.28
VAPBO95292 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
VAPBO95292 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.79□□□□□ -2.28
VAPBO95292 snoU13.6-201ENST00000458785 104 ntBASIC0.79□□□□□ -2.28
VAPBO95292 SCARNA18-201ENST00000459004 134 ntBASIC0.79□□□□□ -2.28
VAPBO95292 SNORD11.1-201ENST00000459482 85 ntBASIC0.79□□□□□ -2.28
VAPBO95292 AC016256.1-201ENST00000547971 354 ntBASIC0.79□□□□□ -2.28
VAPBO95292 AL391840.1-201ENST00000571144 367 ntBASIC0.79□□□□□ -2.28
VAPBO95292 AC211469.2-201ENST00000605461 205 ntBASIC0.79□□□□□ -2.28
VAPBO95292 RNU6-85P-201ENST00000605989 107 ntBASIC0.79□□□□□ -2.28
VAPBO95292 TCL6_2.1-201ENST00000615162 119 ntBASIC0.79□□□□□ -2.28
VAPBO95292 AC009509.4-201ENST00000619202 509 ntBASIC0.79□□□□□ -2.28
VAPBO95292 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.79□□□□□ -2.28
VAPBO95292 MIR373-201ENST00000362273 69 ntBASIC0.78□□□□□ -2.28
VAPBO95292 RNU1-36P-201ENST00000365130 165 ntBASIC0.78□□□□□ -2.28
VAPBO95292 MIR549A-201ENST00000385268 96 ntBASIC0.78□□□□□ -2.28
VAPBO95292 RNU11-5P-201ENST00000391216 129 ntBASIC0.78□□□□□ -2.28
VAPBO95292 HMGN1P14-201ENST00000412459 517 ntBASIC0.78□□□□□ -2.28
VAPBO95292 Z99497.1-201ENST00000421282 135 ntBASIC0.78□□□□□ -2.28
VAPBO95292 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.78□□□□□ -2.28
VAPBO95292 AC013410.2-201ENST00000422627 201 ntBASIC0.78□□□□□ -2.28
VAPBO95292 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.78□□□□□ -2.28
VAPBO95292 AL593851.1-201ENST00000426171 157 ntBASIC0.78□□□□□ -2.28
VAPBO95292 RPL31P35-201ENST00000431058 377 ntBASIC0.78□□□□□ -2.28
VAPBO95292 NFU1P2-201ENST00000448700 469 ntBASIC0.78□□□□□ -2.28
VAPBO95292 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.78□□□□□ -2.28
VAPBO95292 SNORA31.2-201ENST00000516019 134 ntBASIC0.78□□□□□ -2.28
VAPBO95292 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.78□□□□□ -2.28
VAPBO95292 AC008088.1-201ENST00000580993 280 ntBASIC0.78□□□□□ -2.28
VAPBO95292 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.78□□□□□ -2.28
VAPBO95292 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.78□□□□□ -2.28
VAPBO95292 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
VAPBO95292 MIR96-201ENST00000362288 78 ntBASIC0.77□□□□□ -2.29
VAPBO95292 RNU4-28P-201ENST00000364739 141 ntBASIC0.77□□□□□ -2.29
VAPBO95292 SNORD114-24-201ENST00000365029 72 ntBASIC0.77□□□□□ -2.29
VAPBO95292 MIR19B1-201ENST00000384829 87 ntBASIC0.77□□□□□ -2.29
VAPBO95292 RNU6-910P-201ENST00000390844 107 ntBASIC0.77□□□□□ -2.29
VAPBO95292 RN7SKP200-201ENST00000410564 320 ntBASIC0.77□□□□□ -2.29
VAPBO95292 AC063976.4-201ENST00000421971 163 ntBASIC0.77□□□□□ -2.29
VAPBO95292 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.77□□□□□ -2.29
VAPBO95292 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.77□□□□□ -2.29
VAPBO95292 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
VAPBO95292 RNA5SP102-201ENST00000516865 106 ntBASIC0.77□□□□□ -2.29
VAPBO95292 MRPS36P3-201ENST00000519284 130 ntBASIC0.77□□□□□ -2.29
VAPBO95292 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.77□□□□□ -2.29
VAPBO95292 TPRKBP2-201ENST00000565969 475 ntBASIC0.77□□□□□ -2.29
VAPBO95292 AGGF1P4-201ENST00000568249 801 ntBASIC0.77□□□□□ -2.29
VAPBO95292 AC068790.6-201ENST00000602558 258 ntBASIC0.77□□□□□ -2.29
VAPBO95292 AC146944.4-201ENST00000602697 718 ntBASIC0.77□□□□□ -2.29
VAPBO95292 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms