Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 AC025754.2-201ENST00000606491 432 ntBASIC1.22□□□□□ -2.21
CDRT1O95170 AL133215.3-201ENST00000609801 448 ntBASIC1.22□□□□□ -2.21
CDRT1O95170 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CDRT1O95170 AC013412.1-201ENST00000610687 192 ntBASIC1.22□□□□□ -2.21
CDRT1O95170 AL138726.1-201ENST00000614873 333 ntBASIC1.22□□□□□ -2.21
CDRT1O95170 AC022513.1-201ENST00000624512 117 ntBASIC1.22□□□□□ -2.21
CDRT1O95170 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CDRT1O95170 MIR424-201ENST00000362227 98 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 Y_RNA.9-201ENST00000362354 101 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 U8.1-201ENST00000362843 134 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 Y_RNA.123-201ENST00000363338 102 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 U3.9-201ENST00000363823 204 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 RNU4-12P-201ENST00000365233 139 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 RNU6-214P-201ENST00000384130 107 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 RNU6-95P-201ENST00000384697 107 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 MIR1289-2-201ENST00000408360 111 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 AC012306.1-201ENST00000423267 114 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.21□□□□□ -2.22
CDRT1O95170 MTND1P11-201ENST00000456661 876 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 SNORD13-201ENST00000459299 104 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 U8.21-201ENST00000459536 136 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 TOMM22P6-201ENST00000465035 409 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 MTCO1P29-201ENST00000496868 288 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 AC114801.2-201ENST00000503825 781 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.21□□□□□ -2.22
CDRT1O95170 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.21□□□□□ -2.22
CDRT1O95170 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.21□□□□□ -2.22
CDRT1O95170 RNVU1-2-201ENST00000516326 135 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 RNU6-1098P-201ENST00000516772 96 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 SNORA44.1-201ENST00000517031 108 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 SNORA31.24-201ENST00000517232 57 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.21□□□□□ -2.22
CDRT1O95170 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.21□□□□□ -2.22
CDRT1O95170 EIF4A1P12-201ENST00000551910 141 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 AC068338.1-201ENST00000565567 176 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 MIR3169-201ENST00000578032 83 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 MIR3672-201ENST00000584290 82 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 AC146944.4-201ENST00000602697 718 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 MIR3976-201ENST00000606807 139 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 AL590240.4-201ENST00000616908 390 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 MIR3688-2-201ENST00000636963 87 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 AC068137.4-201ENST00000638485 296 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.21□□□□□ -2.22
CDRT1O95170 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.21□□□□□ -2.22
CDRT1O95170 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
CDRT1O95170 AL161722.3-201ENST00000605789 2983 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
CDRT1O95170 RNU1-76P-201ENST00000362903 159 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 RNU4-13P-201ENST00000364019 141 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 RNU4-56P-201ENST00000364700 142 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 RNU6-60P-201ENST00000364792 103 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CDRT1O95170 RNU6-1286P-201ENST00000383871 107 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 RNU6-128P-201ENST00000383976 107 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 Y_RNA.414-201ENST00000384011 101 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 Y_RNA.530-201ENST00000384587 101 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 RNU6-1106P-201ENST00000390845 107 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 SNORD115-47-201ENST00000391226 86 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 MIR208B-201ENST00000401172 77 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 SDAD1P3-201ENST00000427380 333 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 AC015922.2-201ENST00000435593 184 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.2□□□□□ -2.22
CDRT1O95170 FTH1P25-201ENST00000447665 469 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 AC245102.2-201ENST00000448956 180 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.2□□□□□ -2.22
CDRT1O95170 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.2□□□□□ -2.22
CDRT1O95170 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.2□□□□□ -2.22
CDRT1O95170 AC011352.1-201ENST00000512300 793 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 RNU6-256P-201ENST00000516747 97 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 AC087441.2-201ENST00000529141 262 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.2□□□□□ -2.22
CDRT1O95170 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.2□□□□□ -2.22
CDRT1O95170 AC016256.1-201ENST00000547971 354 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 AC026371.1-201ENST00000551867 419 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.2□□□□□ -2.22
CDRT1O95170 MIR3942-201ENST00000585264 109 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 AL645939.4-201ENST00000604495 135 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 U4.5-201ENST00000617137 123 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 MIR7843-201ENST00000622274 79 ntBASIC1.2□□□□□ -2.22
CDRT1O95170 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CDRT1O95170 SNORD50.1-201ENST00000362987 71 ntBASIC1.19□□□□□ -2.22
CDRT1O95170 Y_RNA.151-201ENST00000363566 112 ntBASIC1.19□□□□□ -2.22
CDRT1O95170 RNA5SP493-201ENST00000364115 91 ntBASIC1.19□□□□□ -2.22
CDRT1O95170 Y_RNA.212-201ENST00000364177 102 ntBASIC1.19□□□□□ -2.22
CDRT1O95170 Y_RNA.295-201ENST00000364918 102 ntBASIC1.19□□□□□ -2.22
CDRT1O95170 RNU6-784P-201ENST00000384330 106 ntBASIC1.19□□□□□ -2.22
CDRT1O95170 MIR521-1-201ENST00000384902 87 ntBASIC1.19□□□□□ -2.22
CDRT1O95170 MIR487A-201ENST00000385009 80 ntBASIC1.19□□□□□ -2.22
CDRT1O95170 MIR30A-201ENST00000385092 71 ntBASIC1.19□□□□□ -2.22
CDRT1O95170 MIR549A-201ENST00000385268 96 ntBASIC1.19□□□□□ -2.22
CDRT1O95170 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.19□□□□□ -2.22
CDRT1O95170 AL357139.1-201ENST00000407792 426 ntBASIC1.19□□□□□ -2.22
CDRT1O95170 RNA5SP100-201ENST00000410903 110 ntBASIC1.19□□□□□ -2.22
CDRT1O95170 RNA5SP59-201ENST00000410922 110 ntBASIC1.19□□□□□ -2.22
CDRT1O95170 AC004866.1-201ENST00000411748 78 ntBASIC1.19□□□□□ -2.22
CDRT1O95170 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.19□□□□□ -2.22
CDRT1O95170 UBE2V1P8-201ENST00000437166 265 ntBASIC1.19□□□□□ -2.22
CDRT1O95170 AC079354.2-201ENST00000453523 154 ntBASIC1.19□□□□□ -2.22
CDRT1O95170 AC005908.1-201ENST00000468701 347 ntBASIC1.19□□□□□ -2.22
CDRT1O95170 AC132942.1-201ENST00000486753 483 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms