Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AL354950.2-201ENST00000617939 290 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.95□□□□□ -2.26
UPK1BO75841 MIR8065-201ENST00000620577 100 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 RNU6-975P-201ENST00000384296 105 ntBASIC0.94□□□□□ -2.26
UPK1BO75841 RNU6-1235P-201ENST00000384559 107 ntBASIC0.94□□□□□ -2.26
UPK1BO75841 RNA5SP109-201ENST00000391010 116 ntBASIC0.94□□□□□ -2.26
UPK1BO75841 RNA5SP467-201ENST00000391274 118 ntBASIC0.94□□□□□ -2.26
UPK1BO75841 RNA5SP494-201ENST00000410653 129 ntBASIC0.94□□□□□ -2.26
UPK1BO75841 RPL23AP36-201ENST00000413895 458 ntBASIC0.94□□□□□ -2.26
UPK1BO75841 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.94□□□□□ -2.26
UPK1BO75841 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.94□□□□□ -2.26
UPK1BO75841 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.94□□□□□ -2.26
UPK1BO75841 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.94□□□□□ -2.26
UPK1BO75841 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.94□□□□□ -2.26
UPK1BO75841 RNU6-498P-201ENST00000459468 107 ntBASIC0.94□□□□□ -2.26
UPK1BO75841 HMGN1P12-201ENST00000499125 195 ntBASIC0.94□□□□□ -2.26
UPK1BO75841 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.94□□□□□ -2.26
UPK1BO75841 RNU7-40P-201ENST00000516397 64 ntBASIC0.94□□□□□ -2.26
UPK1BO75841 RNU6-1038P-201ENST00000516516 104 ntBASIC0.94□□□□□ -2.26
UPK1BO75841 RNU2-34P-201ENST00000516534 121 ntBASIC0.94□□□□□ -2.26
UPK1BO75841 RNU6-1069P-201ENST00000516612 133 ntBASIC0.94□□□□□ -2.26
UPK1BO75841 RN7SKP88-201ENST00000516847 250 ntBASIC0.94□□□□□ -2.26
UPK1BO75841 RAB11AP2-201ENST00000545905 639 ntBASIC0.94□□□□□ -2.26
UPK1BO75841 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.94□□□□□ -2.26
UPK1BO75841 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.94□□□□□ -2.26
UPK1BO75841 7SK.8-201ENST00000612110 250 ntBASIC0.94□□□□□ -2.26
UPK1BO75841 7SK.11-201ENST00000615477 250 ntBASIC0.94□□□□□ -2.26
UPK1BO75841 AC009509.4-201ENST00000619202 509 ntBASIC0.94□□□□□ -2.26
UPK1BO75841 7SK.13-201ENST00000622040 250 ntBASIC0.94□□□□□ -2.26
UPK1BO75841 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
UPK1BO75841 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
UPK1BO75841 RNU5B-2P-201ENST00000363036 113 ntBASIC0.93□□□□□ -2.26
UPK1BO75841 Y_RNA.123-201ENST00000363338 102 ntBASIC0.93□□□□□ -2.26
UPK1BO75841 RNU6-1305P-201ENST00000364353 104 ntBASIC0.93□□□□□ -2.26
UPK1BO75841 RNU6-1317P-201ENST00000364582 104 ntBASIC0.93□□□□□ -2.26
UPK1BO75841 Y_RNA.287-201ENST00000364853 94 ntBASIC0.93□□□□□ -2.26
UPK1BO75841 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
UPK1BO75841 AL606923.1-201ENST00000406616 190 ntBASIC0.93□□□□□ -2.26
UPK1BO75841 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.93□□□□□ -2.26
UPK1BO75841 NFU1P2-201ENST00000448700 469 ntBASIC0.93□□□□□ -2.26
UPK1BO75841 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.93□□□□□ -2.26
UPK1BO75841 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.93□□□□□ -2.26
UPK1BO75841 AC116337.1-201ENST00000509680 687 ntBASIC0.93□□□□□ -2.26
UPK1BO75841 SNORA14.1-201ENST00000516113 141 ntBASIC0.93□□□□□ -2.26
UPK1BO75841 SUMO2P16-201ENST00000519475 264 ntBASIC0.93□□□□□ -2.26
UPK1BO75841 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.93□□□□□ -2.26
UPK1BO75841 CENPUP1-201ENST00000526649 1202 ntBASIC0.93□□□□□ -2.26
UPK1BO75841 AC025423.5-201ENST00000550230 219 ntBASIC0.93□□□□□ -2.26
UPK1BO75841 AC004223.2-201ENST00000590309 544 ntBASIC0.93□□□□□ -2.26
UPK1BO75841 AC068647.2-201ENST00000637380 353 ntBASIC0.93□□□□□ -2.26
UPK1BO75841 RNU6-1187P-201ENST00000364771 110 ntBASIC0.92□□□□□ -2.26
UPK1BO75841 RNU6-534P-201ENST00000364877 106 ntBASIC0.92□□□□□ -2.26
UPK1BO75841 RNA5SP126-201ENST00000365092 109 ntBASIC0.92□□□□□ -2.26
UPK1BO75841 RNA5SP190-201ENST00000365222 118 ntBASIC0.92□□□□□ -2.26
UPK1BO75841 RNU6-348P-201ENST00000384386 107 ntBASIC0.92□□□□□ -2.26
UPK1BO75841 RN7SKP142-201ENST00000411236 328 ntBASIC0.92□□□□□ -2.26
UPK1BO75841 RNU6-57P-201ENST00000411348 103 ntBASIC0.92□□□□□ -2.26
UPK1BO75841 AC010154.1-201ENST00000425857 269 ntBASIC0.92□□□□□ -2.26
UPK1BO75841 AL606517.2-201ENST00000442855 241 ntBASIC0.92□□□□□ -2.26
UPK1BO75841 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.92□□□□□ -2.26
UPK1BO75841 MTCO2P4-201ENST00000517968 247 ntBASIC0.92□□□□□ -2.26
UPK1BO75841 AC016256.1-201ENST00000547971 354 ntBASIC0.92□□□□□ -2.26
UPK1BO75841 AC026470.2-201ENST00000561492 181 ntBASIC0.92□□□□□ -2.26
UPK1BO75841 MIR3664-201ENST00000579074 99 ntBASIC0.92□□□□□ -2.26
UPK1BO75841 MIR4513-201ENST00000581077 86 ntBASIC0.92□□□□□ -2.26
UPK1BO75841 MIR4295-201ENST00000585286 85 ntBASIC0.92□□□□□ -2.26
UPK1BO75841 AL929325.1-201ENST00000603096 117 ntBASIC0.92□□□□□ -2.26
UPK1BO75841 AL391646.1-201ENST00000603860 190 ntBASIC0.92□□□□□ -2.26
UPK1BO75841 AC073413.2-201ENST00000604332 360 ntBASIC0.92□□□□□ -2.26
UPK1BO75841 AC097065.2-201ENST00000608159 533 ntBASIC0.92□□□□□ -2.26
UPK1BO75841 AC099654.5-201ENST00000636479 350 ntBASIC0.92□□□□□ -2.26
UPK1BO75841 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
UPK1BO75841 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
UPK1BO75841 SNORA72.2-201ENST00000365028 127 ntBASIC0.91□□□□□ -2.26
UPK1BO75841 SNORA67.5-201ENST00000391036 107 ntBASIC0.91□□□□□ -2.26
UPK1BO75841 RNU6-1158P-201ENST00000391167 107 ntBASIC0.91□□□□□ -2.26
UPK1BO75841 RPL21P1-201ENST00000399532 476 ntBASIC0.91□□□□□ -2.26
UPK1BO75841 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.91□□□□□ -2.26
UPK1BO75841 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.91□□□□□ -2.26
UPK1BO75841 TPTE2P5-203ENST00000458118 728 ntBASIC0.91□□□□□ -2.26
UPK1BO75841 AC114982.1-201ENST00000469402 321 ntBASIC0.91□□□□□ -2.26
UPK1BO75841 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.91□□□□□ -2.26
UPK1BO75841 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.91□□□□□ -2.26
UPK1BO75841 RNA5SP404-201ENST00000517118 132 ntBASIC0.91□□□□□ -2.26
UPK1BO75841 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.91□□□□□ -2.26
UPK1BO75841 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.91□□□□□ -2.26
UPK1BO75841 AL161670.1-201ENST00000554348 137 ntBASIC0.91□□□□□ -2.26
UPK1BO75841 TPRKBP2-201ENST00000565969 475 ntBASIC0.91□□□□□ -2.26
UPK1BO75841 MIR4528-201ENST00000577763 90 ntBASIC0.91□□□□□ -2.26
UPK1BO75841 MIR4424-201ENST00000585257 86 ntBASIC0.91□□□□□ -2.26
UPK1BO75841 AC023043.2-201ENST00000589678 1026 ntBASIC0.91□□□□□ -2.26
UPK1BO75841 AC004492.1-201ENST00000607036 742 ntBASIC0.91□□□□□ -2.26
UPK1BO75841 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.91□□□□□ -2.26
UPK1BO75841 FER-210ENST00000628534 558 ntTSL 5 BASIC0.91□□□□□ -2.26
UPK1BO75841 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
UPK1BO75841 RNU6-1286P-201ENST00000383871 107 ntBASIC0.9□□□□□ -2.27
UPK1BO75841 RNU6-968P-201ENST00000384076 107 ntBASIC0.9□□□□□ -2.27
UPK1BO75841 MIR487A-201ENST00000385009 80 ntBASIC0.9□□□□□ -2.27
UPK1BO75841 RNA5SP323-201ENST00000391094 133 ntBASIC0.9□□□□□ -2.27
UPK1BO75841 MIR1253-201ENST00000408273 105 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms