Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 MED13P1-201ENST00000428342 171 ntBASIC0.34□□□□□ -2.36
SNRNP200O75643 USP9YP28-201ENST00000435142 589 ntBASIC0.34□□□□□ -2.36
SNRNP200O75643 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.34□□□□□ -2.36
SNRNP200O75643 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.34□□□□□ -2.36
SNRNP200O75643 AC117522.1-201ENST00000509821 380 ntBASIC0.34□□□□□ -2.36
SNRNP200O75643 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.34□□□□□ -2.36
SNRNP200O75643 AC018659.1-201ENST00000551083 169 ntBASIC0.34□□□□□ -2.36
SNRNP200O75643 AC008088.1-201ENST00000580993 280 ntBASIC0.34□□□□□ -2.36
SNRNP200O75643 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.34□□□□□ -2.36
SNRNP200O75643 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.34□□□□□ -2.36
SNRNP200O75643 AC093913.1-201ENST00000614178 329 ntBASIC0.34□□□□□ -2.36
SNRNP200O75643 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.34□□□□□ -2.36
SNRNP200O75643 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.34□□□□□ -2.36
SNRNP200O75643 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.33□□□□□ -2.36
SNRNP200O75643 U3.8-201ENST00000363675 217 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 RNU6-190P-201ENST00000384154 102 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 MIR891A-201ENST00000401237 79 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 AL031577.2-201ENST00000404133 280 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 AC004866.1-201ENST00000411748 78 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 AC010099.3-201ENST00000423896 409 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 AC244023.1-201ENST00000426884 112 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 AL606662.1-201ENST00000445763 553 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.33□□□□□ -2.36
SNRNP200O75643 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.33□□□□□ -2.36
SNRNP200O75643 MTCO3P7-201ENST00000510008 774 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 RNA5SP168-201ENST00000516642 112 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 RNU6-1098P-201ENST00000516772 96 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 AC022616.6-201ENST00000520479 119 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 AC136628.3-201ENST00000521868 290 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 MTATP6P15-201ENST00000527233 835 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 7SK.7-201ENST00000603504 247 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 AC242498.1-201ENST00000604134 111 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 AC243994.1-201ENST00000618627 109 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 AC138649.3-201ENST00000622154 254 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 AC139792.3-201ENST00000623525 224 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.33□□□□□ -2.36
SNRNP200O75643 AC013437.2-201ENST00000639587 677 ntBASIC0.33□□□□□ -2.36
SNRNP200O75643 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
SNRNP200O75643 RNU6-1123P-201ENST00000362347 106 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 RNU6-692P-201ENST00000384496 107 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 RPS29P13-201ENST00000402041 169 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 AC006461.1-201ENST00000412637 326 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.32□□□□□ -2.36
SNRNP200O75643 MTATP6P16-201ENST00000434543 526 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 EPS15P1-201ENST00000448836 336 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
SNRNP200O75643 NDUFB4P10-201ENST00000452541 359 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 snoU13.25-201ENST00000458945 104 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.32□□□□□ -2.36
SNRNP200O75643 RAP1BP2-201ENST00000478270 544 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 APOOP3-201ENST00000536787 586 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.32□□□□□ -2.36
SNRNP200O75643 EIF4A1P12-201ENST00000551910 141 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 AL929325.1-201ENST00000603096 117 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 AC107308.1-201ENST00000615897 301 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 AC104010.1-201ENST00000616889 150 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 Y_RNA.367-201ENST00000365544 101 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 MIR10B-201ENST00000385011 110 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 SNORA75.2-201ENST00000391138 150 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 SNORA75.3-201ENST00000391231 150 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 AC063976.4-201ENST00000421971 163 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 AL590135.1-201ENST00000422215 156 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 AC019205.3-201ENST00000424573 156 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 AL133396.1-201ENST00000432048 687 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 AC016700.2-201ENST00000446011 156 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 RPS29P15-201ENST00000458329 171 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 AC015911.1-201ENST00000495111 156 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 SNORD27.1-201ENST00000516319 72 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 RNA5SP481-201ENST00000516814 122 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 AC115990.1-201ENST00000526957 301 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.32□□□□□ -2.36
SNRNP200O75643 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.32□□□□□ -2.36
SNRNP200O75643 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.32□□□□□ -2.36
SNRNP200O75643 MIR3664-201ENST00000579074 99 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 AC131159.1-201ENST00000621854 213 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 snoZ196.1-201ENST00000625269 89 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 AC068137.4-201ENST00000638485 296 ntBASIC0.32□□□□□ -2.36
SNRNP200O75643 RNU6-428P-201ENST00000362942 107 ntBASIC0.31□□□□□ -2.36
SNRNP200O75643 Y_RNA.287-201ENST00000364853 94 ntBASIC0.31□□□□□ -2.36
SNRNP200O75643 AC106883.1-201ENST00000418805 562 ntBASIC0.31□□□□□ -2.36
SNRNP200O75643 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.31□□□□□ -2.36
SNRNP200O75643 UBE2V1P12-201ENST00000503954 474 ntBASIC0.31□□□□□ -2.36
SNRNP200O75643 SNORD79.1-201ENST00000516069 84 ntBASIC0.31□□□□□ -2.36
SNRNP200O75643 ZNF519P3-201ENST00000557158 1032 ntBASIC0.31□□□□□ -2.36
SNRNP200O75643 MIR4742-201ENST00000581069 85 ntBASIC0.31□□□□□ -2.36
SNRNP200O75643 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.31□□□□□ -2.36
SNRNP200O75643 AL162424.1-201ENST00000602325 221 ntBASIC0.31□□□□□ -2.36
SNRNP200O75643 AL357312.1-201ENST00000603879 298 ntBASIC0.31□□□□□ -2.36
SNRNP200O75643 AL158050.2-201ENST00000605336 568 ntBASIC0.31□□□□□ -2.36
SNRNP200O75643 BX284668.6-201ENST00000606899 438 ntBASIC0.31□□□□□ -2.36
SNRNP200O75643 AC009159.2-201ENST00000617603 606 ntBASIC0.31□□□□□ -2.36
SNRNP200O75643 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
SNRNP200O75643 RNU6-950P-201ENST00000384651 107 ntBASIC0.31□□□□□ -2.36
SNRNP200O75643 RNU6-1106P-201ENST00000390845 107 ntBASIC0.31□□□□□ -2.36
SNRNP200O75643 AL355143.1-201ENST00000407101 841 ntBASIC0.31□□□□□ -2.36
SNRNP200O75643 AL356583.2-201ENST00000426536 280 ntBASIC0.31□□□□□ -2.36
SNRNP200O75643 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.31□□□□□ -2.36
SNRNP200O75643 RPL22P17-201ENST00000438729 315 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms