Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RNU6-211P-201ENST00000384047 107 ntBASIC4.3□□□□□ -1.72
PTCD1O75127 SNORA40-201ENST00000388090 126 ntBASIC4.3□□□□□ -1.72
PTCD1O75127 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.3□□□□□ -1.72
PTCD1O75127 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.3□□□□□ -1.72
PTCD1O75127 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.3□□□□□ -1.72
PTCD1O75127 AP002884.2-201ENST00000471647 395 ntBASIC4.3□□□□□ -1.72
PTCD1O75127 AL121594.1-201ENST00000475906 575 ntBASIC4.3□□□□□ -1.72
PTCD1O75127 AC103975.1-201ENST00000482506 483 ntBASIC4.3□□□□□ -1.72
PTCD1O75127 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.3□□□□□ -1.72
PTCD1O75127 RNA5SP170-201ENST00000517150 101 ntBASIC4.3□□□□□ -1.72
PTCD1O75127 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.3□□□□□ -1.72
PTCD1O75127 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.3□□□□□ -1.72
PTCD1O75127 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.3□□□□□ -1.72
PTCD1O75127 AC004467.1-201ENST00000615678 330 ntBASIC4.3□□□□□ -1.72
PTCD1O75127 AC008873.1-201ENST00000625051 138 ntBASIC4.3□□□□□ -1.72
PTCD1O75127 CEP170P1-201ENST00000502249 4587 ntBASIC4.3□□□□□ -1.72
PTCD1O75127 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PTCD1O75127 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTCD1O75127 AL133412.1-201ENST00000380194 2992 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTCD1O75127 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.29□□□□□ -1.72
PTCD1O75127 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTCD1O75127 MIR422A-201ENST00000362286 90 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 RNU1-18P-201ENST00000363062 164 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 Y_RNA.101-201ENST00000363154 102 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 RNU6-529P-201ENST00000363383 104 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 RNU4-47P-201ENST00000410876 114 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 CYCSP48-201ENST00000417124 323 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 COTL1P1-201ENST00000422309 375 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 RPL27AP5-201ENST00000469428 449 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 RNU6-155P-201ENST00000516347 100 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 AP005660.1-201ENST00000522972 293 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 AP002001.1-203ENST00000534002 267 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 AC024614.2-201ENST00000577584 372 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 MIR3145-201ENST00000580727 82 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 AC090616.3-201ENST00000582184 217 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 AL356575.1-201ENST00000603008 283 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 AL133393.1-201ENST00000603277 287 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 SNRPGP20-201ENST00000604477 205 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 AL008718.3-201ENST00000610217 321 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 LINC00901.1-201ENST00000617252 152 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 AC091932.3-201ENST00000624223 323 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.29□□□□□ -1.72
PTCD1O75127 AC010889.1-201ENST00000566193 2666 ntBASIC4.29□□□□□ -1.72
PTCD1O75127 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.29□□□□□ -1.72
PTCD1O75127 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTCD1O75127 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTCD1O75127 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTCD1O75127 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PTCD1O75127 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.28□□□□□ -1.72
PTCD1O75127 SNORD114-19-201ENST00000363072 75 ntBASIC4.28□□□□□ -1.72
PTCD1O75127 Y_RNA.238-201ENST00000364441 102 ntBASIC4.28□□□□□ -1.72
PTCD1O75127 SNORA18.3-201ENST00000384122 132 ntBASIC4.28□□□□□ -1.72
PTCD1O75127 RNU6-429P-201ENST00000384582 108 ntBASIC4.28□□□□□ -1.72
PTCD1O75127 RNA5SP38-201ENST00000410750 119 ntBASIC4.28□□□□□ -1.72
PTCD1O75127 ELOCP21-201ENST00000412558 336 ntBASIC4.28□□□□□ -1.72
PTCD1O75127 AC006989.1-201ENST00000427212 131 ntBASIC4.28□□□□□ -1.72
PTCD1O75127 RNU7-23P-201ENST00000459465 62 ntBASIC4.28□□□□□ -1.72
PTCD1O75127 SNORA25.12-201ENST00000516202 82 ntBASIC4.28□□□□□ -1.72
PTCD1O75127 MIR548X2-201ENST00000579776 100 ntBASIC4.28□□□□□ -1.72
PTCD1O75127 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.28□□□□□ -1.72
PTCD1O75127 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTCD1O75127 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
PTCD1O75127 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTCD1O75127 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
PTCD1O75127 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTCD1O75127 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
PTCD1O75127 Y_RNA.23-201ENST00000362496 106 ntBASIC4.27□□□□□ -1.73
PTCD1O75127 RNU4-80P-201ENST00000363200 141 ntBASIC4.27□□□□□ -1.73
PTCD1O75127 RNU6-312P-201ENST00000364629 107 ntBASIC4.27□□□□□ -1.73
PTCD1O75127 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTCD1O75127 Y_RNA.510-201ENST00000384511 114 ntBASIC4.27□□□□□ -1.73
PTCD1O75127 RNU6-1211P-201ENST00000459179 105 ntBASIC4.27□□□□□ -1.73
PTCD1O75127 UBE2DNL-203ENST00000474922 222 ntBASIC4.27□□□□□ -1.73
PTCD1O75127 RPS27AP9-201ENST00000477681 438 ntBASIC4.27□□□□□ -1.73
PTCD1O75127 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.27□□□□□ -1.73
PTCD1O75127 AC020914.4-201ENST00000597690 277 ntBASIC4.27□□□□□ -1.73
PTCD1O75127 MIR3658-201ENST00000636291 56 ntBASIC4.27□□□□□ -1.73
PTCD1O75127 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTCD1O75127 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PTCD1O75127 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTCD1O75127 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTCD1O75127 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTCD1O75127 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PTCD1O75127 Y_RNA.7-201ENST00000362352 102 ntBASIC4.26□□□□□ -1.73
PTCD1O75127 Y_RNA.40-201ENST00000362645 93 ntBASIC4.26□□□□□ -1.73
PTCD1O75127 Y_RNA.75-201ENST00000362927 97 ntBASIC4.26□□□□□ -1.73
PTCD1O75127 Y_RNA.182-201ENST00000363880 111 ntBASIC4.26□□□□□ -1.73
PTCD1O75127 SNORA80A-201ENST00000363922 136 ntBASIC4.26□□□□□ -1.73
PTCD1O75127 RNU6-1310P-201ENST00000384153 107 ntBASIC4.26□□□□□ -1.73
PTCD1O75127 Y_RNA.500-201ENST00000384466 111 ntBASIC4.26□□□□□ -1.73
PTCD1O75127 RNY4P18-201ENST00000391107 89 ntBASIC4.26□□□□□ -1.73
PTCD1O75127 RNA5SP475-201ENST00000410568 110 ntBASIC4.26□□□□□ -1.73
PTCD1O75127 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.26□□□□□ -1.73
PTCD1O75127 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.26□□□□□ -1.73
PTCD1O75127 SNORA72.7-201ENST00000516349 94 ntBASIC4.26□□□□□ -1.73
PTCD1O75127 RNU6-107P-201ENST00000516643 102 ntBASIC4.26□□□□□ -1.73
PTCD1O75127 MIR3684-201ENST00000579779 74 ntBASIC4.26□□□□□ -1.73
PTCD1O75127 RNU6-91P-201ENST00000607774 107 ntBASIC4.26□□□□□ -1.73
PTCD1O75127 AC005520.5-201ENST00000613926 164 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms