Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 CYP3A137P-201ENST00000562436 69 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 AC090517.1-201ENST00000569307 266 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 TMF1P1-201ENST00000576058 373 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 AC008751.2-201ENST00000597885 980 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 MZT1P2-201ENST00000604387 248 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 AC009994.1-201ENST00000606889 253 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 AC004492.1-201ENST00000607036 742 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.9□□□□□ -2.27
SHOX2O60902 7SK.8-201ENST00000612110 250 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 AL133173.2-201ENST00000614270 90 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 7SK.11-201ENST00000615477 250 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 7SK.13-201ENST00000622040 250 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 AC011155.2-201ENST00000623202 216 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 AL359697.1-201ENST00000624879 587 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 AL391516.1-201ENST00000554380 2449 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SHOX2O60902 RNU1-124P-201ENST00000363861 145 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 Y_RNA.367-201ENST00000365544 101 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 RNU6-378P-201ENST00000384324 107 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
SHOX2O60902 MIR300-201ENST00000401138 83 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 Y_RNA.598-201ENST00000410480 95 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 AL358176.2-201ENST00000425769 204 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 AC092989.1-201ENST00000481235 277 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 MTND2P14-201ENST00000482139 351 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.89□□□□□ -2.27
SHOX2O60902 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 MTCO3P7-201ENST00000510008 774 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 SNORD116-28-201ENST00000516123 91 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 RNU6-1041P-201ENST00000516254 102 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 RNA5SP285-201ENST00000516619 119 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 CENPUP1-201ENST00000526649 1202 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 MIR4709-201ENST00000577272 72 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 NIFKP6-201ENST00000598115 845 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 AL365434.2-201ENST00000607979 234 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 AL391834.2-201ENST00000609982 546 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 AC040896.1-201ENST00000613819 479 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 AC008250.2-201ENST00000615261 205 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 AC008147.4-201ENST00000617570 1204 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 AC136475.10-201ENST00000620253 385 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 AC091925.1-201ENST00000623204 462 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 AC022418.1-201ENST00000624118 445 ntBASIC0.89□□□□□ -2.27
SHOX2O60902 AC009541.1-201ENST00000438279 2662 ntBASIC0.88□□□□□ -2.27
SHOX2O60902 RNU6-877P-201ENST00000383868 107 ntBASIC0.88□□□□□ -2.27
SHOX2O60902 MIR515-2-201ENST00000384883 83 ntBASIC0.88□□□□□ -2.27
SHOX2O60902 MIR515-1-201ENST00000384884 83 ntBASIC0.88□□□□□ -2.27
SHOX2O60902 MIR208B-201ENST00000401172 77 ntBASIC0.88□□□□□ -2.27
SHOX2O60902 AL354692.1-201ENST00000423044 315 ntBASIC0.88□□□□□ -2.27
SHOX2O60902 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.88□□□□□ -2.27
SHOX2O60902 USP9YP28-201ENST00000435142 589 ntBASIC0.88□□□□□ -2.27
SHOX2O60902 AC104850.1-201ENST00000435940 476 ntBASIC0.88□□□□□ -2.27
SHOX2O60902 EPS15P1-201ENST00000448836 336 ntBASIC0.88□□□□□ -2.27
SHOX2O60902 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.88□□□□□ -2.27
SHOX2O60902 MTCYBP1-201ENST00000454315 1119 ntBASIC0.88□□□□□ -2.27
SHOX2O60902 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.88□□□□□ -2.27
SHOX2O60902 AC008628.2-201ENST00000502605 298 ntBASIC0.88□□□□□ -2.27
SHOX2O60902 UBL5P1-201ENST00000507979 193 ntBASIC0.88□□□□□ -2.27
SHOX2O60902 AC011406.1-201ENST00000512440 370 ntBASIC0.88□□□□□ -2.27
SHOX2O60902 RNU6-351P-201ENST00000516097 100 ntBASIC0.88□□□□□ -2.27
SHOX2O60902 CBX3P8-201ENST00000532412 525 ntBASIC0.88□□□□□ -2.27
SHOX2O60902 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.88□□□□□ -2.27
SHOX2O60902 MIR3682-201ENST00000581338 84 ntBASIC0.88□□□□□ -2.27
SHOX2O60902 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.88□□□□□ -2.27
SHOX2O60902 CTHRC1P1-201ENST00000605383 469 ntBASIC0.88□□□□□ -2.27
SHOX2O60902 MIR6513-201ENST00000621188 64 ntBASIC0.88□□□□□ -2.27
SHOX2O60902 AC027335.2-201ENST00000624030 375 ntBASIC0.88□□□□□ -2.27
SHOX2O60902 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SHOX2O60902 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SHOX2O60902 RNU6-1123P-201ENST00000362347 106 ntBASIC0.87□□□□□ -2.27
SHOX2O60902 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
SHOX2O60902 RNU6-1303P-201ENST00000364841 107 ntBASIC0.87□□□□□ -2.27
SHOX2O60902 SNORA25-201ENST00000384384 134 ntBASIC0.87□□□□□ -2.27
SHOX2O60902 RNU6-331P-201ENST00000384724 107 ntBASIC0.87□□□□□ -2.27
SHOX2O60902 MIR454-201ENST00000390180 115 ntBASIC0.87□□□□□ -2.27
SHOX2O60902 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
SHOX2O60902 GPR143P-201ENST00000434155 205 ntBASIC0.87□□□□□ -2.27
SHOX2O60902 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.87□□□□□ -2.27
SHOX2O60902 AC073910.1-201ENST00000445047 438 ntBASIC0.87□□□□□ -2.27
SHOX2O60902 RNU7-182P-201ENST00000459009 62 ntBASIC0.87□□□□□ -2.27
SHOX2O60902 RAP1BP2-201ENST00000478270 544 ntBASIC0.87□□□□□ -2.27
SHOX2O60902 AL163973.1-201ENST00000484753 577 ntBASIC0.87□□□□□ -2.27
SHOX2O60902 AC079382.1-201ENST00000493346 557 ntBASIC0.87□□□□□ -2.27
SHOX2O60902 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.87□□□□□ -2.27
SHOX2O60902 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.87□□□□□ -2.27
SHOX2O60902 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.87□□□□□ -2.27
SHOX2O60902 AK3P2-201ENST00000507976 429 ntBASIC0.87□□□□□ -2.27
SHOX2O60902 RN7SKP265-201ENST00000516448 223 ntBASIC0.87□□□□□ -2.27
SHOX2O60902 RNA5SP503-201ENST00000517047 117 ntBASIC0.87□□□□□ -2.27
SHOX2O60902 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.87□□□□□ -2.27
SHOX2O60902 MIR3941-201ENST00000582572 103 ntBASIC0.87□□□□□ -2.27
SHOX2O60902 MIR4723-201ENST00000585070 81 ntBASIC0.87□□□□□ -2.27
SHOX2O60902 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
SHOX2O60902 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SHOX2O60902 RNU6-534P-201ENST00000364877 106 ntBASIC0.86□□□□□ -2.27
SHOX2O60902 RNU6-434P-201ENST00000384376 107 ntBASIC0.86□□□□□ -2.27
SHOX2O60902 Y_RNA.504-201ENST00000384481 104 ntBASIC0.86□□□□□ -2.27
SHOX2O60902 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.86□□□□□ -2.27
SHOX2O60902 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.86□□□□□ -2.27
SHOX2O60902 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.86□□□□□ -2.27
SHOX2O60902 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms