Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 Y_RNA.422-201ENST00000384054 114 ntBASIC2.32□□□□□ -2.04
ZIC3O60481 SNORA12-201ENST00000391162 147 ntBASIC2.32□□□□□ -2.04
ZIC3O60481 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.32□□□□□ -2.04
ZIC3O60481 AC114482.1-201ENST00000418010 247 ntBASIC2.32□□□□□ -2.04
ZIC3O60481 AL590556.1-201ENST00000423231 483 ntBASIC2.32□□□□□ -2.04
ZIC3O60481 AC092427.1-202ENST00000430569 476 ntBASIC2.32□□□□□ -2.04
ZIC3O60481 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.32□□□□□ -2.04
ZIC3O60481 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.32□□□□□ -2.04
ZIC3O60481 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.32□□□□□ -2.04
ZIC3O60481 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.32□□□□□ -2.04
ZIC3O60481 RN7SL499P-201ENST00000481141 276 ntBASIC2.32□□□□□ -2.04
ZIC3O60481 AC107032.1-201ENST00000485945 480 ntBASIC2.32□□□□□ -2.04
ZIC3O60481 AC132942.1-201ENST00000486753 483 ntBASIC2.32□□□□□ -2.04
ZIC3O60481 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.32□□□□□ -2.04
ZIC3O60481 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.32□□□□□ -2.04
ZIC3O60481 RNU6-911P-201ENST00000516523 104 ntBASIC2.32□□□□□ -2.04
ZIC3O60481 RNA5SP148-201ENST00000516527 94 ntBASIC2.32□□□□□ -2.04
ZIC3O60481 SNORA40.14-201ENST00000516543 86 ntBASIC2.32□□□□□ -2.04
ZIC3O60481 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.32□□□□□ -2.04
ZIC3O60481 UBL5P4-201ENST00000562584 236 ntBASIC2.32□□□□□ -2.04
ZIC3O60481 AC006600.1-201ENST00000572529 153 ntBASIC2.32□□□□□ -2.04
ZIC3O60481 MIR5188-201ENST00000583467 113 ntBASIC2.32□□□□□ -2.04
ZIC3O60481 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.32□□□□□ -2.04
ZIC3O60481 AL356575.1-201ENST00000603008 283 ntBASIC2.32□□□□□ -2.04
ZIC3O60481 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.32□□□□□ -2.04
ZIC3O60481 MIR5739-201ENST00000619803 80 ntBASIC2.32□□□□□ -2.04
ZIC3O60481 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
ZIC3O60481 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.32□□□□□ -2.04
ZIC3O60481 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ZIC3O60481 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ZIC3O60481 RNU6-944P-201ENST00000364023 107 ntBASIC2.31□□□□□ -2.04
ZIC3O60481 RNU6-541P-201ENST00000384709 110 ntBASIC2.31□□□□□ -2.04
ZIC3O60481 MIR27B-201ENST00000385129 97 ntBASIC2.31□□□□□ -2.04
ZIC3O60481 MIR549A-201ENST00000385268 96 ntBASIC2.31□□□□□ -2.04
ZIC3O60481 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
ZIC3O60481 RNA5SP210-201ENST00000391034 120 ntBASIC2.31□□□□□ -2.04
ZIC3O60481 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
ZIC3O60481 Y_RNA.597-201ENST00000410463 100 ntBASIC2.31□□□□□ -2.04
ZIC3O60481 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.31□□□□□ -2.04
ZIC3O60481 AC003685.2-201ENST00000422795 395 ntBASIC2.31□□□□□ -2.04
ZIC3O60481 WARS2P1-201ENST00000429678 537 ntBASIC2.31□□□□□ -2.04
ZIC3O60481 AC096638.1-201ENST00000444678 216 ntBASIC2.31□□□□□ -2.04
ZIC3O60481 RNU6-1137P-201ENST00000517073 99 ntBASIC2.31□□□□□ -2.04
ZIC3O60481 MIR2355-201ENST00000517199 87 ntBASIC2.31□□□□□ -2.04
ZIC3O60481 DEFB131C-201ENST00000528817 165 ntBASIC2.31□□□□□ -2.04
ZIC3O60481 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.31□□□□□ -2.04
ZIC3O60481 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.31□□□□□ -2.04
ZIC3O60481 AC104695.3-201ENST00000604052 296 ntBASIC2.31□□□□□ -2.04
ZIC3O60481 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.31□□□□□ -2.04
ZIC3O60481 AL132822.1-201ENST00000617063 513 ntBASIC2.31□□□□□ -2.04
ZIC3O60481 AL138825.1-201ENST00000618587 192 ntBASIC2.31□□□□□ -2.04
ZIC3O60481 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.31□□□□□ -2.04
ZIC3O60481 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.31□□□□□ -2.04
ZIC3O60481 ZNF204P-201ENST00000416749 2397 ntBASIC2.3□□□□□ -2.04
ZIC3O60481 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
ZIC3O60481 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ZIC3O60481 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.3□□□□□ -2.04
ZIC3O60481 RNU6-639P-201ENST00000384074 107 ntBASIC2.3□□□□□ -2.04
ZIC3O60481 RNU6-281P-201ENST00000384212 103 ntBASIC2.3□□□□□ -2.04
ZIC3O60481 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.3□□□□□ -2.04
ZIC3O60481 AL161788.1-201ENST00000441805 169 ntBASIC2.3□□□□□ -2.04
ZIC3O60481 RPL39P40-201ENST00000445481 146 ntBASIC2.3□□□□□ -2.04
ZIC3O60481 AL118496.2-201ENST00000448300 230 ntBASIC2.3□□□□□ -2.04
ZIC3O60481 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.3□□□□□ -2.04
ZIC3O60481 RPPH1-2P-201ENST00000516688 293 ntBASIC2.3□□□□□ -2.04
ZIC3O60481 AC018630.3-201ENST00000542637 96 ntBASIC2.3□□□□□ -2.04
ZIC3O60481 MIR4680-201ENST00000580906 66 ntBASIC2.3□□□□□ -2.04
ZIC3O60481 AC006504.6-201ENST00000590142 199 ntBASIC2.3□□□□□ -2.04
ZIC3O60481 AC008121.3-201ENST00000618726 433 ntBASIC2.3□□□□□ -2.04
ZIC3O60481 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.3□□□□□ -2.04
ZIC3O60481 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
ZIC3O60481 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.3□□□□□ -2.04
ZIC3O60481 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
ZIC3O60481 RNU6-873P-201ENST00000363833 107 ntBASIC2.29□□□□□ -2.04
ZIC3O60481 SNORA63C-201ENST00000364578 129 ntBASIC2.29□□□□□ -2.04
ZIC3O60481 RNU6-1160P-201ENST00000384546 104 ntBASIC2.29□□□□□ -2.04
ZIC3O60481 MIR606-201ENST00000384851 96 ntBASIC2.29□□□□□ -2.04
ZIC3O60481 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
ZIC3O60481 CBX3P6-201ENST00000430257 527 ntBASIC2.29□□□□□ -2.04
ZIC3O60481 AL445305.1-201ENST00000432577 575 ntBASIC2.29□□□□□ -2.04
ZIC3O60481 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.29□□□□□ -2.04
ZIC3O60481 CYP2C59P-201ENST00000457790 269 ntBASIC2.29□□□□□ -2.04
ZIC3O60481 AC093852.1-201ENST00000503587 266 ntBASIC2.29□□□□□ -2.04
ZIC3O60481 RPL23AP94-201ENST00000512518 302 ntBASIC2.29□□□□□ -2.04
ZIC3O60481 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.29□□□□□ -2.04
ZIC3O60481 RNA5SP320-201ENST00000516263 124 ntBASIC2.29□□□□□ -2.04
ZIC3O60481 RN7SKP40-201ENST00000517211 242 ntBASIC2.29□□□□□ -2.04
ZIC3O60481 HSPE1P18-201ENST00000517602 280 ntBASIC2.29□□□□□ -2.04
ZIC3O60481 AC022868.1-201ENST00000517767 391 ntBASIC2.29□□□□□ -2.04
ZIC3O60481 AP002770.2-201ENST00000543613 532 ntBASIC2.29□□□□□ -2.04
ZIC3O60481 AL442163.3-201ENST00000554110 156 ntBASIC2.29□□□□□ -2.04
ZIC3O60481 HSBP1P1-201ENST00000555205 166 ntBASIC2.29□□□□□ -2.04
ZIC3O60481 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.29□□□□□ -2.04
ZIC3O60481 MIR5695-201ENST00000579717 85 ntBASIC2.29□□□□□ -2.04
ZIC3O60481 AC125232.2-201ENST00000592457 143 ntBASIC2.29□□□□□ -2.04
ZIC3O60481 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
ZIC3O60481 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.28□□□□□ -2.04
ZIC3O60481 MIR449A-201ENST00000362113 91 ntBASIC2.28□□□□□ -2.04
ZIC3O60481 RNA5SP125-201ENST00000364843 120 ntBASIC2.28□□□□□ -2.04
ZIC3O60481 RNU6-245P-201ENST00000384020 107 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms